Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YvbF/YvaV regulog to Bacillus amyloliquefaciens FZB42

Reference regulog properties
Source regulog: YvbF/YvaV - Bacillales
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode: repressor
Biological process: Osmotic stress response
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus amyloliquefaciens FZB42
Orthologous TF(s) RBAM_031110, RBAM_031060
Regulated genes 4
Built upon 12 sites [see more]
Predicted regulatory interactions in Bacillus amyloliquefaciens FZB42
Locus tag Position Score Sequence
Position: -111
Score: 7.8
Sequence: TAAACTTTTTAATTTACAAAGTTTA
Locus tag: RBAM_031050
RBAM_031050 -111 7.8 TAAACTTTTTAATTTACAAAGTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: opuCA
Ortholog function: Osmotically activated L-carnitine/crotonobetaine/gamma-butyrobetaine/choline-O-sulphate/ectoine/choline ABC transporter, ATP-binding protein OpuCA
Bacillus amyloliquefaciens FZB42 RBAM_031050 -111 7.8 TAAACTTTTTAATTTACAAAGTTTA
Bacillus amyloliquefaciens FZB42 RBAM_031050 -111 7.8 TAAACTTTTTAATTTACAAAGTTTA
Bacillus subtilis subsp. subtilis str. 168 BSU33730 -110 7.1 TAAACTTTTTATTTTATAAACTTTA
Position: -199
Score: 7.8
Sequence: TAAACTTTGTAAATTAAAAAGTTTA
Locus tag: RBAM_031060
RBAM_031060 -199 7.8 TAAACTTTGTAAATTAAAAAGTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yvaV
Ortholog function: Transcriptional regulator of choline transport, MarR family
Bacillus amyloliquefaciens FZB42 RBAM_031060 -199 7.8 TAAACTTTGTAAATTAAAAAGTTTA
Bacillus subtilis subsp. subtilis str. 168 BSU33740 -198 7.1 TAAAGTTTATAAAATAAAAAGTTTA
Position: -201
Score: 7
Sequence: TGAAATTTGTAAAATAAAAAGTTTA
Locus tag: RBAM_031110
RBAM_031110 -201 7 TGAAATTTGTAAAATAAAAAGTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yvbF
Ortholog function: Transcriptional regulator of choline transport, MarR family
Bacillus amyloliquefaciens FZB42 RBAM_031110 -201 7 TGAAATTTGTAAAATAAAAAGTTTA
Bacillus subtilis subsp. subtilis str. 168 BSU33840 -203 7.5 TGAACTTTGTAAAATAAAAAGTTTA
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