Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YtlI regulog to Bacillus amyloliquefaciens FZB42

Reference regulog properties
Source regulog: YtlI - Bacillales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: L-cystine transporter
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus amyloliquefaciens FZB42
Orthologous TF(s) RBAM_030860
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Bacillus amyloliquefaciens FZB42
Locus tag Position Score Sequence
Position: -107
Score: 5.8
Sequence: TTTACTTTTTTTGAT
Locus tag: RBAM_030850
RBAM_030850 -107 5.8 TTTACTTTTTTTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytmI
Ortholog function: Putative N-acetyltransferase
Bacillus subtilis subsp. subtilis str. 168 BSU29390 -129 4.5 ATTAAAATTACTGAA
-107 5.8 TTTACTTTTTTTGAT
Bacillus amyloliquefaciens FZB42 RBAM_030850 -129 5.4 ATTAATTTTCTTGAA
-107 5.8 TTTACTTTTTTTGAT
Position: -52
Score: 3.6
Sequence: ACTGATTTATTTGAC
Position: -48
Score: 3.3
Sequence: ATTTATTTGACTAAT
Locus tag: RBAM_030860
RBAM_030860 -52 3.6 ACTGATTTATTTGAC
-48 3.3 ATTTATTTGACTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytlI
Ortholog function: Transcriptional regulator YtlI, LysR family
Bacillus subtilis subsp. subtilis str. 168 BSU29400 -61 1.6 ATCAAAAAAAgTAAA
-39 3.4 TTCAGTAATTTTAAT
Bacillus amyloliquefaciens FZB42 RBAM_030860 -36 1.6 ATCAAAAAAAgTAAA
-14 2.4 tTCAAgAAAATTAAT