Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CitR regulog to Bacillus amyloliquefaciens FZB42

Reference regulog properties
Source regulog: CitR - Bacillales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor
Biological process: Citrate metabolism
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus amyloliquefaciens FZB42
Orthologous TF(s) RBAM_009690
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Bacillus amyloliquefaciens FZB42
Locus tag Position Score Sequence
Position: -32
Score: 6.3
Sequence: TAATTAAAACTTTTAATCA
Locus tag: RBAM_009690
RBAM_009690 -32 6.3 TAATTAAAACTTTTAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citR
Ortholog function: Transcriptional regulator of citrate synthase, LysR family
Bacillus subtilis subsp. subtilis str. 168 BSU09430 -33 6.5 TAATTAAAAATATTAATCA
Bacillus amyloliquefaciens FZB42 RBAM_009690 -32 6.3 TAATTAAAACTTTTAATCA
Bacillus licheniformis DSM 13 BLi01009 -30 6.6 TGATTAATAAAATTAATCA
Bacillus clausii KSM-K16 ABC4042 -32 6.5 TGATTAAGATATTTAATCA
Position: -90
Score: 6.3
Sequence: TGATTAAAAGTTTTAATTA
Locus tag: RBAM_009700
RBAM_009700 -90 6.3 TGATTAAAAGTTTTAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citA
Ortholog function: Citrate synthase (si) (EC 2.3.3.1)
Bacillus subtilis subsp. subtilis str. 168 BSU09440 -94 6.5 TGATTAATATTTTTAATTA
Bacillus amyloliquefaciens FZB42 RBAM_009700 -90 6.3 TGATTAAAAGTTTTAATTA
Bacillus licheniformis DSM 13 BLi01010 -99 6.6 TGATTAATTTTATTAATCA
Bacillus clausii KSM-K16 ABC4043 -98 6.5 TGATTAAATATCTTAATCA
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