Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NiaR regulog to Bacillus amyloliquefaciens FZB42

Reference regulog properties
Source regulog: NiaR - Bacillales
Regulator type: Transcription factor
Regulator family: NiaR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: Niacin
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus amyloliquefaciens FZB42
Orthologous TF(s) RBAM_024940
Regulated genes 3
Built upon 26 sites [see more]
Predicted regulatory interactions in Bacillus amyloliquefaciens FZB42
Locus tag Position Score Sequence
Position: -61
Score: 5
Sequence: ACAATGTGTAAAGACAGGTGTA
Locus tag: RBAM_003210
RBAM_003210 -61 5 ACAATGTGTAAAGACAGGTGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: niaP
Ortholog function: Niacin transporter NiaP
Bacillus subtilis subsp. subtilis str. 168 BSU02950 -63 5 ACAATGTGTAAAGACAGGTGTA
Bacillus amyloliquefaciens FZB42 RBAM_003210 -61 5 ACAATGTGTAAAGACAGGTGTA
Bacillus licheniformis DSM 13 BLi00841 -71 5.4 CAAAAGTGTAAAGACAGGTGTA
Geobacillus kaustophilus HTA426 GK3433 -39 5.2 TAAATATGTCTTTACATTGATA
Bacillus cereus ATCC 14579 BC5418 -37 4.7 ATGATGTGTAAAGACACCTGTG
Position: -43
Score: 6.5
Sequence: TATAGGTGTCAAGACAGGTGTA
Locus tag: RBAM_024920
RBAM_024920 -43 6.5 TATAGGTGTCAAGACAGGTGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadB
Ortholog function: L-aspartate oxidase (EC 1.4.3.16)
Bacillus subtilis subsp. subtilis str. 168 BSU27870 -41 6.5 TATAGGTGTCAAGACAGGTGTA
Bacillus amyloliquefaciens FZB42 RBAM_024920 -43 6.5 TATAGGTGTCAAGACAGGTGTA
Bacillus pumilus SAFR-032 BPUM_2427 -38 5.9 GATATGTGTCAAGACAGGTGTA
Bacillus licheniformis DSM 13 BLi02914 -42 6.6 TATAGGTGTCAAGACACATGTA
Position: -84
Score: 6.5
Sequence: TACACCTGTCTTGACACCTATA
Locus tag: RBAM_024930
RBAM_024930 -84 6.5 TACACCTGTCTTGACACCTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifS
Ortholog function: Cysteine desulfurase (EC 2.8.1.7)
Bacillus subtilis subsp. subtilis str. 168 BSU27880 -83 6.5 TACACCTGTCTTGACACCTATA
Bacillus amyloliquefaciens FZB42 RBAM_024930 -84 6.5 TACACCTGTCTTGACACCTATA
Bacillus licheniformis DSM 13 BLi02915 -80 6.6 TACATGTGTCTTGACACCTATA
Anoxybacillus flavithermus WK1 Aflv_0702 -41 5.5 TCATACTGTCTTGACACCTATA
-29 4.4 GACACCTATATTGACATATATT
Geobacillus kaustophilus HTA426 GK2602 -86 6.1 TTCACCTGTCTTGACATCTATA
Bacillus cereus ATCC 14579 BC4424 -127 6.2 TCCAACTGTCTTGACACCTATA
Bacillus halodurans C-125 BH1217 -102 6.4 TACATATGTCTTGACATCTATA
Bacillus clausii KSM-K16 ABC1546 -73 6.1 TACAGTTGTCTTGTCACCTATA
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