Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Bacillus amyloliquefaciens FZB42

Reference regulog properties
Source regulog: Zur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus amyloliquefaciens FZB42
Orthologous TF(s) RBAM_023410
Regulated genes 5
Built upon 67 sites [see more]
Predicted regulatory interactions in Bacillus amyloliquefaciens FZB42
Locus tag Position Score Sequence
Position: -105
Score: 5.8
Sequence: CAAAACGTAATTACTTCGTTTTA
Locus tag: RBAM_003110
RBAM_003110 -105 5.8 CAAAACGTAATTACTTCGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adcA
Ortholog function: Mn2+/Zn2+ ABC transporter Zn(II)-binding lipoprotein
Bacillus subtilis subsp. subtilis str. 168 BSU02850 -92 5.6 CAAAACGTAATGACTTCGGTTTA
-52 5.8 AAAATCGTTATCATTTTGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_003110 -105 5.8 CAAAACGTAATTACTTCGTTTTA
-42 5.5 GAAATCGTCATCATTCTGATTTA
Paenibacillus sp. JDR-2 Pjdr2_3067 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Paenibacillus sp. JDR-2 Pjdr2_3067 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Position: -103
Score: 6.6
Sequence: TAAATAGTAACGATTACGATTTA
Locus tag: RBAM_003550
RBAM_003550 -103 6.6 TAAATAGTAACGATTACGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Bacillus subtilis subsp. subtilis str. 168 BSU03360 -37 5.8 TAAATCGTAATCATTCTATTTTA
Bacillus amyloliquefaciens FZB42 RBAM_003550 -103 6.6 TAAATAGTAACGATTACGATTTA
-38 5.7 TAAATCGTAATCATTCTATTTTG
Bacillus pumilus SAFR-032 BPUM_3311 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00765 -46 7 TAAATCGTAATAATTACGATTTG
Bacillus clausii KSM-K16 ABC4020 -40 6.9 TAATTCGTAATCATTACGATTTA
Oceanobacillus iheyensis HTE831 OB3429 -82 6.3 TTAATCGTAATGATTACGTTTTT
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Position: -37
Score: 6.7
Sequence: CAAAACGTAATTATTACGATTTG
Locus tag: RBAM_009150
RBAM_009150 -37 6.7 CAAAACGTAATTATTACGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpsN2
Ortholog function: 30S ribosomal protein S14
Bacillus subtilis subsp. subtilis str. 168 BSU08880 -40 6.6 TAAATCGTAACAATTTCGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_009150 -37 6.7 CAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_3312 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00952 -44 6.7 TAAATCGTAATCATTACGCTTTG
Bacillus clausii KSM-K16 ABC4019 -45 6.1 TAAATCGTAATAATAATGATTTT
Oceanobacillus iheyensis HTE831 OB3432 -247 6 TTAATCGTAATCGTTACGATGTA
Position: -40
Score: 6.8
Sequence: TAAAACGTAATAATTACGATTTG
Locus tag: RBAM_022140
RBAM_022140 -40 6.8 TAAAACGTAATAATTACGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmGA1
Ortholog function: 50S ribosomal protein L33
Bacillus amyloliquefaciens FZB42 RBAM_022140 -40 6.8 TAAAACGTAATAATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_3310 -42 6.5 CAAATCGTAACCATTACGAATTA
Bacillus licheniformis DSM 13 BLi02553 -37 6.6 TAAAGCGTAATGATTACGTTTTA
Anoxybacillus flavithermus WK1 Aflv_1438 -45 6.3 CAAAACGTAATGATTACTATTTT
Bacillus cereus ATCC 14579 BC4339 -55 7 TAAATCGTAATCATTACGTTTTA
Position: -39
Score: 6.8
Sequence: TAAAACGTAATTATTACGATTTG
Locus tag: RBAM_027710
RBAM_027710 -39 6.8 TAAAACGTAATTATTACGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmE2
Ortholog function: 50S ribosomal protein L31 type B
Bacillus subtilis subsp. subtilis str. 168 BSU30700 -39 7 TAAAACGTAATTATTACGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_027710 -39 6.8 TAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_2709 -44 6.5 TAAAGCGTAATGATTACGTTTTG
Bacillus licheniformis DSM 13 BLi03214 -39 6.6 TAAAACGTAATTATTACGTTTTG
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