Propagation of YodB/CatR regulog to Bacillus amyloliquefaciens FZB42
| Source regulog: | YodB/CatR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | HxlR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response |
| Effector: | Diamide; Quinone |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus amyloliquefaciens FZB42 |
| Orthologous TF(s) | RBAM_019300, RBAM_030960 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -42
Score: 5.5 Sequence: GCTTACATAAAGTAAGT
Locus tag: RBAM_008420
|
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| RBAM_008420 | -42 | 5.5 | GCTTACATAAAGTAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: catD | ||||
| Ortholog function: Catechol-2,3-dioxygenase membrane subunit | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008420 | -42 | 5.5 | GCTTACATAAAGTAAGT |
| Bacillus licheniformis DSM 13 | BLi00861 | -133 | 5.2 | ACTTACACAAAGTAAGT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08230 | -42 | 5.5 | GCTTACATTAAGTAAGT |
|
Position: -105
Score: 4.6 Sequence: ACTTACTTTTTTATAGT
Locus tag: RBAM_011500
|
||||
| RBAM_011500 | -105 | 4.6 | ACTTACTTTTTTATAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spxA | ||||
| Ortholog function: RNA polymerase-binding transcriptional regulator of oxidative stress response | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_011500 | -105 | 4.6 | ACTTACTTTTTTATAGT |
| Bacillus cereus ATCC 14579 | BC1188 | -165 | 4.7 | AGTTACTTATTAAAAGT |
| Bacillus licheniformis DSM 13 | BLi01238 | -104 | 4.6 | ACTTACTTTTTTATAGT |
| Bacillus pumilus SAFR-032 | BPUM_1077 | -106 | 4.6 | ACTTACTTTTTTATAGT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU11500 | -106 | 4.6 | ACTTACTTTTTTATAGT |
|
Position: -80
Score: 5.3 Sequence: GCTTACTAAATGTAACT
Locus tag: RBAM_019300
|
||||
| RBAM_019300 | -80 | 5.3 | GCTTACTAAATGTAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yodB | ||||
| Ortholog function: Transcriptional regulator of oxidative stress, HxlR family | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1958 | -78 | 5 | ACTTACTTTTTATTAGT |
| -41 | 4.6 | AGTTACAATAAGTTTGT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_019300 | -80 | 5.3 | GCTTACTAAATGTAACT |
| Bacillus cereus ATCC 14579 | BC5197 | -49 | 4.1 | ACTTACTTTTTACAAGA |
| Bacillus licheniformis DSM 13 | BLi02274 | -90 | 5.5 | ACTTACTTTTTGTAACT |
| Bacillus pumilus SAFR-032 | BPUM_1875 | -81 | 5.5 | ACTTACTTATTGTAACT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU19540 | -80 | 5.3 | GCTTACTAAATGTAACT |
| Paenibacillus sp. JDR-2 | Pjdr2_4807 | -134 | 4.2 | ACTTACTTTAGTCAAGT |
|
Position: -63
Score: 5.3 Sequence: AGTTACATTTAGTAAGC
Locus tag: RBAM_019310
|
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| RBAM_019310 | -63 | 5.3 | AGTTACATTTAGTAAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yodC | ||||
| Ortholog function: Putative NAD(P)H nitroreductase | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1959 | -68 | 4.6 | ACAAACTTATTGTAACT |
| -31 | 5 | ACTAATAAAAAGTAAGT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_019310 | -63 | 5.3 | AGTTACATTTAGTAAGC |
| Bacillus cereus ATCC 14579 | BC4045 | -69 | 5.7 | ACTTACAAAATGTAAGT |
| Bacillus halodurans C-125 | BH2236 | -63 | 4.4 | ACTTTACTTTTGTAAGT |
| Bacillus licheniformis DSM 13 | BLi02275 | -73 | 5.5 | AGTTACAAAAAGTAAGT |
| Bacillus pumilus SAFR-032 | BPUM_1876 | -75 | 5.5 | AGTTACAATAAGTAAGT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU19550 | -66 | 5.3 | AGTTACATTTAGTAAGC |