Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TnrA regulog to Bacillus selenitireducens MLS10

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus selenitireducens MLS10
Orthologous TF(s) BselDRAFT_0296
Regulated genes 20
Built upon 304 sites [see more]
Predicted regulatory interactions in Bacillus selenitireducens MLS10
Locus tag Position Score Sequence
Position: -253
Score: 4.8
Sequence: TGAAAGATAATTTGACA
Locus tag: BselDRAFT_1561
BselDRAFT_1561 -253 4.8 TGAAAGATAATTTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: appA
Ortholog function: Oligopeptide ABC transporter (oligopeptide-binding protein)
Bacillus clausii KSM-K16 ABC3661 -558 4.3 TGTAAGATTTCTTATCA
Position: -136
Score: 5.1
Sequence: TGTCAGAATTTTTTACA
Locus tag: BselDRAFT_0836
BselDRAFT_0836 -136 5.1 TGTCAGAATTTTTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Bacillus pumilus SAFR-032 BPUM_2473 -312 4.9 TGTGAAAAAATATGACA
Bacillus licheniformis DSM 13 BLi02962 -383 4.3 TGGCAAAAAATCTAACC
-339 4.5 CGGGATAAAATCTAACA
Position: -219
Score: 4.4
Sequence: CGTCAGCAAATCTGTCA
Locus tag: BselDRAFT_1887
BselDRAFT_1887 -219 4.4 CGTCAGCAAATCTGTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pucC
Ortholog function: Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)
Paenibacillus sp. JDR-2 Pjdr2_3319 -179 4.1 TGTGATCTATTGTTACG
-96 4.3 TGTAAGATATATTGACG
Position: -180
Score: 5.6
Sequence: TGTTAGATTTTCTGACA
Locus tag: BselDRAFT_1123
BselDRAFT_1123 -180 5.6 TGTTAGATTTTCTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: Glutamine synthetase type I (EC 6.3.1.2)
Bacillus halodurans C-125 BH2360 -158 5.6 TGTCAGATTATCTTACA
Position: -106
Score: 4.7
Sequence: CGTCACATAACCTGACA
Position: -40
Score: 4.6
Sequence: CGTCACATTAGCTGACA
Locus tag: BselDRAFT_1226
BselDRAFT_1226 -106 4.7 CGTCACATAACCTGACA
-40 4.6 CGTCACATTAGCTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Anoxybacillus flavithermus WK1 Aflv_1332 -112 4.6 TGTCATGAAAAATAACA
-49 4.8 TGTAATATATTATAACC
-27 5 TGTTATAAAAAATGACA
Geobacillus kaustophilus HTA426 GK1452 -124 4.4 TGTTAAGAAATTTAACA
-48 5.4 TGTTATATATTATGACA
Bacillus halodurans C-125 BH3834 -138 4 TGTCAGATATAGGCACA
-113 4.9 TGTCTGATTATCTGACA
-41 4.3 TATTAGAAAAACTTACA
Bacillus clausii KSM-K16 ABC3928 -84 5.2 TGTTAGATATCCTGACA
Paenibacillus sp. JDR-2 Pjdr2_2141 -159 4.2 TGTGAAAAAACTTAACA
-34 4.5 TGTTAGTAAACATCACA
Position: -93
Score: 5.3
Sequence: TGTCAGATTATCTGACG
Locus tag: BselDRAFT_0296
BselDRAFT_0296 -93 5.3 TGTCAGATTATCTGACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -124 3.9 TGTTAATTTTTCTTCCG
-81 5.5 TGTTAGAAAATATGACA
Bacillus amyloliquefaciens FZB42 RBAM_013130 -124 4.1 TGTCAATTTTTCTGCCG
-81 4.8 CGTCAGAAAACCTGACA
Bacillus pumilus SAFR-032 BPUM_1230 -121 4 TGTCAACTTTCCTTCCA
-80 5.5 TGTTATATTTTCTAACA
Bacillus licheniformis DSM 13 BLi01490 -124 3.8 TGTAAACTTTTCTTCCG
-81 5.6 TGTTAGATTTTCTGACA
Anoxybacillus flavithermus WK1 Aflv_1544 -113 4.9 TGTTACTTTTTATAACA
-82 4.9 TGTTACTTTTTATAACA
-27 5.4 TGTTATAAAATATGACA
Geobacillus kaustophilus HTA426 GK1860 -86 3.9 TGTTAATTTTATTTACA
-33 4.6 CGTTAGAAAATATAACG
Bacillus halodurans C-125 BH1494 -110 5.5 TGTAAGAAAATCTAACA
Bacillus clausii KSM-K16 ABC1760 -99 5.5 TGTTAGATTTTCTTACA
-57 5 TGTGATATATTGTTACA
Oceanobacillus iheyensis HTE831 OB1650 -80 5.1 TGTTAGAAATACTAACA
-57 4.3 TGACATATAAGCTGACG
Paenibacillus sp. JDR-2 Pjdr2_5154 -302 5.7 TGTTAGATAATCTAACA
-41 5 TGTTAGAAAACATTACA
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