Propagation of TnrA regulog to Bacillus weihenstephanensis KBAB4
| Source regulog: | TnrA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor (activator) |
| Biological process: | Nitrogen assimilation |
| Effector: | NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus weihenstephanensis KBAB4 |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 19 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -8
Score: 3.7 Sequence: TGATAACTATGATTACA
Locus tag: BcerKBAB4_0452
|
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| BcerKBAB4_0452 | -8 | 3.7 | TGATAACTATGATTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygaF | ||||
| Ortholog function: Peroxiredoxin | ||||
| Paenibacillus sp. JDR-2 | Pjdr2_5899 | -34 | 3.6 | GGTTAGTAAACCTGACT |
|
Position: 20
Score: 3.3 Sequence: TGTAAATAAATATTATG
Locus tag: BcerKBAB4_0552
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| BcerKBAB4_0552 | 20 | 3.3 | TGTAAATAAATATTATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnQ | ||||
| Ortholog function: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU27430 | -28 | 4 | GGTCAAATTTTCTGATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_024530 | -123 | 3.5 | TATCAGAAATTACGAAA |
| Bacillus pumilus SAFR-032 | BPUM_2382 | -93 | 3.8 | TGTTAAAAATGAATACA |
| Bacillus clausii KSM-K16 | ABC0770 | -8 | 3.4 | GGACAGCAATGATCACA |
| Paenibacillus sp. JDR-2 | Pjdr2_2874 | -63 | 4.7 | TGTTATCTAACCTAACA |
|
Position: -70
Score: 3.4 Sequence: CGTGATAAATAGTAAGA
Locus tag: BcerKBAB4_0554
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| BcerKBAB4_0554 | -70 | 3.4 | CGTGATAAATAGTAAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnM | ||||
| Ortholog function: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU27450 | -28 | 4 | GGTCAAATTTTCTGATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_024550 | -123 | 3.5 | TATCAGAAATTACGAAA |
| Bacillus pumilus SAFR-032 | BPUM_2384 | -93 | 3.8 | TGTTAAAAATGAATACA |
| Bacillus clausii KSM-K16 | ABC0772 | -8 | 3.4 | GGACAGCAATGATCACA |
| Paenibacillus sp. JDR-2 | Pjdr2_2876 | -63 | 4.7 | TGTTATCTAACCTAACA |
|
Position: -71
Score: 4.3 Sequence: TGTCACTTTATATTAAA
Locus tag: BcerKBAB4_0574
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| BcerKBAB4_0574 | -71 | 4.3 | TGTCACTTTATATTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppD | ||||
| Ortholog function: Oligopeptide ABC transporter ATP-binding protein | ||||
| Bacillus halodurans C-125 | BH3640 | -180 | 4.3 | TGTGAGATAATTTAGCA |
| Bacillus clausii KSM-K16 | ABC3094 | -446 | 5 | TGTTATATCTTCTTACA |
| Oceanobacillus iheyensis HTE831 | OB2615 | -469 | 4.3 | TGTAATATTTTATGAAG |
| -325 | 3.9 | TGTTAATTTTTATCAAA | ||
|
Position: -104
Score: 4.1 Sequence: TGTAAGAAATATTGAAA
Position: -46
Score: 4 Sequence: TGTTATGATAAATCTCA
Locus tag: BcerKBAB4_2061
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| BcerKBAB4_2061 | -104 | 4.1 | TGTAAGAAATATTGAAA | |
| -46 | 4 | TGTTATGATAAATCTCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thyB | ||||
| Ortholog function: Thymidylate synthase (EC 2.1.1.45) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1455 | -43 | 5 | TGTCATAATAAATGACA |
| Oceanobacillus iheyensis HTE831 | OB1740 | -98 | 4 | TTTACGATTATGTAACA |
| Paenibacillus sp. JDR-2 | Pjdr2_2655 | -11 | 4.5 | TGATATAAAAAGTGACA |
|
Position: -84
Score: 5.1 Sequence: TGTAAGAAAAGCTAACA
Locus tag: BcerKBAB4_3470
|
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| BcerKBAB4_3470 | -84 | 5.1 | TGTAAGAAAAGCTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnR | ||||
| Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17450 | -82 | 4.3 | TGTTAAGAATCCTTACA |
| -59 | 5 | TGACACATAATATAACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_017250 | -82 | 4.3 | TGTTAAGATTCCTTACA |
| -59 | 4.9 | TGACACAAAATATAACA | ||
| Bacillus pumilus SAFR-032 | BPUM_1636 | -82 | 4.4 | TGTTAATATTCCTAACA |
| -59 | 5.1 | TGACATATAATATAACA | ||
| -54 | 4.2 | TATAATATAACATGACA | ||
| Bacillus licheniformis DSM 13 | BLi01992 | -81 | 4.2 | TGTAAAGAATCCTTACA |
| -58 | 5 | TGACACATTATATAACA | ||
| Anoxybacillus flavithermus WK1 | Aflv_1508 | -82 | 4.7 | TGTGATAAAATGTAACG |
| -59 | 4.3 | TGACATATAAGTTAACA | ||