Propagation of AraC regulog to Escherichia coli APEC O1

Reference regulog properties
Source regulog:	AraC - Enterobacterales
Regulator type:	Transcription factor
Regulator family:	AraC
Regulation mode:	activator (repressor)
Biological process:	Arabinose utilization
Effector:	Arabinose
Phylum:	Proteobacteria
Propagated regulon:
Target genome	Escherichia coli APEC O1
Orthologous TF(s)	APECO1_1920
Regulated genes	4

Built upon 56 sites [see more]

Predicted regulatory interactions in *Escherichia coli APEC O1*
	Locus tag	Position	Score	Sequence
Position: -173 Score: 8.7 Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA Locus tag: APECO1_1921
	APECO1_1921	-173	8.7	TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: Ribulokinase (EC 2.7.1.16)
Citrobacter koseri ATCC BAA-895	CKO_03319	-174	8.3	TAACAAAAGTGTCTATA-(4)-CGACAGAAATGTCCACA
		-100	8.1	TAGCATTTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Enterobacter sp. 638	Ent638_0610	-172	8.6	TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA
		-98	8.1	CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Escherichia coli str. K-12 substr. MG1655	b0063	-173	8.7	TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
		-99	8	TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00062	-172	8.7	TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
		-98	8.5	CAGCAAAATAATCCATA-(4)-TAGCGAATCCGGCCTGA
Salmonella typhimurium LT2	STM0103	-173	8.4	TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA
		-99	8.1	TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA

Position: -99 Score: 6.8 Sequence: TAGCAATTTAATCCATA-(4)-TGCTATTTCCGACCTGA Locus tag: APECO1_3665
	APECO1_3665	-99	6.8	TAGCAATTTAATCCATA-(4)-TGCTATTTCCGACCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araE
Ortholog function: Low-affinity L-arabinose transport system proton symport protein
Enterobacter sp. 638	Ent638_3294	-179	4.6	TATAAATTAAGTATTTA-(4)-TAAATGATGATTATTCA
		-158	4.8	TAAATGATGATTATTCA-(4)-AAGTTTAAATTGGAATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03264	-159	7.5	CAGCAATATAGTCCATA-(4)-TGGCTTATCCTGCCTGA
		-73	4.9	TGGCAGGAAAAAAATGA-(4)-AATCAGTAACGACTCTA
Salmonella typhimurium LT2	STM3016	-99	6.9	TAGCCATTTAATCCATA-(4)-TGCCGTTTCCAGCCTGA

Position: -188 Score: 7.8 Sequence: GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA Locus tag: APECO1_2164
	APECO1_2164	-188	7.8	GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytfQ
Ortholog function: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Citrobacter koseri ATCC BAA-895	CKO_03603	-189	7.5	TGACAGGAAAATCCATA-(4)-CAGCTGCTTTTTTCATA
Enterobacter sp. 638	Ent638_0412	-189	7.3	TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Escherichia coli str. K-12 substr. MG1655	b4227	-188	7.8	GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04622	-324	7.4	TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of AraC regulog to Escherichia coli APEC O1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --