Propagation of Fur regulog to Escherichia coli APEC O1
| Source regulog: | Fur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Escherichia coli APEC O1 |
| Orthologous TF(s) | APECO1_1381 |
| Regulated genes | 46 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -57
Score: 4.7 Sequence: CTTTATAATAATCATTCTC
Position: -51
Score: 4.7 Sequence: AATAATCATTCTCGTTTAC
Locus tag: APECO1_1835
|
||||
| APECO1_1835 | -57 | 4.7 | CTTTATAATAATCATTCTC | |
| -51 | 4.7 | AATAATCATTCTCGTTTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuA | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0150 | -57 | 4.4 | CTTTATAATAATCATTCTC |
| -51 | 4.5 | AATAATCATTCTCGTTTAC | ||
| Salmonella typhimurium LT2 | STM0191 | -56 | 4.8 | GGTTATAATAATAATTATC |
| -50 | 4.8 | AATAATAATTATCGTTTAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03218 | -57 | 4 | GGTCATAAGAATAATTCTC |
| -51 | 4.3 | AAGAATAATTCTCGTTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00165 | -56 | 4 | CGTCATAATAATAATTCTC |
| -50 | 4.5 | AATAATAATTCTCGTTTAC | ||
| Enterobacter sp. 638 | Ent638_0690 | -58 | 4.3 | GGTCATAATAATAATTCTC |
| -52 | 4.5 | AATAATAATTCTCGTTTAC | ||
|
Position: -184
Score: 4.4 Sequence: ATTATTGATAACTATTTGC
Position: -178
Score: 4.2 Sequence: GATAACTATTTGCATTTGC
Locus tag: APECO1_1465
|
||||
| APECO1_1465 | -184 | 4.4 | ATTATTGATAACTATTTGC | |
| -178 | 4.2 | GATAACTATTTGCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepA | ||||
| Ortholog function: TonB-dependent siderophore receptor FepA | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0584 | -184 | 4.1 | ATTATTGATAACTATTTGC |
| -178 | 4 | GATAACTATTTGCATTTGC | ||
| Salmonella typhimurium LT2 | STM0585 | -132 | 4.1 | ATTATTGATAACTATTTGC |
| -126 | 4 | GATAACTATTTGCATTTGC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02579 | -246 | 4.4 | GATAACTATTTTCATTTGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00602 | -197 | 4.1 | ATTATTGATAACTATTTGC |
| -191 | 4 | GATAACTATTTGCATTTGC | ||
| Enterobacter sp. 638 | Ent638_1116 | -196 | 4.4 | ATTATTGATAACTATTTTC |
| -190 | 4.4 | GATAACTATTTTCATTTGC | ||
|
Position: -25
Score: 4.9 Sequence: GATAACGATAATTAATTTC
Position: -19
Score: 5 Sequence: GATAATTAATTTCATTATC
Locus tag: APECO1_1459
|
||||
| APECO1_1459 | -25 | 4.9 | GATAACGATAATTAATTTC | |
| -19 | 5 | GATAATTAATTTCATTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepD | ||||
| Ortholog function: iron-enterobactin (enterochelin) ABC transporter membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0590 | -37 | 4.8 | GATAACGATAATTAATTTC |
| -31 | 4.9 | GATAATTAATTTCATTATC | ||
| Salmonella typhimurium LT2 | STM0592 | -37 | 4.8 | GATAACGATAATTACTATC |
| -31 | 5 | GATAATTACTATCATTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02571 | -37 | 4.8 | GATAACGATAATTACTATC |
| -31 | 5 | GATAATTACTATCATTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00608 | -43 | 4.8 | GATAACGATAATTACTATC |
| -37 | 5 | GATAATTACTATCATTATC | ||
| Enterobacter sp. 638 | Ent638_1122 | -30 | 4.8 | GATAACGATAATTACTATC |
| -24 | 5 | GATAATTACTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_3424 | -48 | 4.4 | AATAATGATAATAAAACTC |
| -42 | 4.4 | GATAATAAAACTCATTTAT | ||
|
Position: -98
Score: 5 Sequence: GATAATGAAATTAATTATC
Position: -92
Score: 5 Sequence: GAAATTAATTATCGTTATC
Locus tag: APECO1_1458
|
||||
| APECO1_1458 | -98 | 5 | GATAATGAAATTAATTATC | |
| -92 | 5 | GAAATTAATTATCGTTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybdA | ||||
| Ortholog function: enterobactin exporter EntS, MFS family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0591 | -98 | 4.8 | GATAATGAAATTAATTATC |
| -92 | 4.9 | GAAATTAATTATCGTTATC | ||
| Salmonella typhimurium LT2 | STM0593 | -98 | 4.9 | GATAATGATAGTAATTATC |
| -92 | 4.8 | GATAGTAATTATCGTTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02570 | -99 | 4.9 | GATAATGATAGTAATTATC |
| -93 | 4.8 | GATAGTAATTATCGTTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00609 | -94 | 4.9 | GATAATGATAGTAATTATC |
| -88 | 4.8 | GATAGTAATTATCGTTATC | ||
| Enterobacter sp. 638 | Ent638_1123 | -94 | 4.9 | GATAATGATAGTAATTATC |
| -88 | 4.8 | GATAGTAATTATCGTTATC | ||
| Serratia proteamaculans 568 | Spro_3423 | -112 | 4.4 | ATAAATGAGTTTTATTATC |
| -106 | 4.4 | GAGTTTTATTATCATTATT | ||
|
Position: -159
Score: 5.3 Sequence: AATAATGATTATCATTTAT
Position: -44
Score: 4.7 Sequence: GAAAATGAGAAGCATTAAC
Locus tag: APECO1_1457
|
||||
| APECO1_1457 | -159 | 5.3 | AATAATGATTATCATTTAT | |
| -44 | 4.7 | GAAAATGAGAAGCATTAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepB | ||||
| Ortholog function: ferric enterobactin (enterochelin) binding protein; periplasmic component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0592 | -230 | 4.7 | GAAAATGAGAAGCATTATT |
| Citrobacter koseri ATCC BAA-895 | CKO_02569 | -203 | 4.7 | GAAAATGAGAAGCATTAAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00610 | -166 | 4.8 | GATATTAAGAATAATTATC |
| -160 | 4.6 | AAGAATAATTATCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1124 | -159 | 4.6 | AAGAATAATTATCATTTAT |
| -44 | 4.7 | GAAAATGAGAAGCATTAAC | ||
|
Position: -36
Score: 5.2 Sequence: ATAAATGATAATCATTATT
Locus tag: APECO1_1456
|
||||
| APECO1_1456 | -36 | 5.2 | ATAAATGATAATCATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: entC | ||||
| Ortholog function: isochorismate synthetase, siderophore biosynthesis | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0593 | -163 | 4.6 | AATAATGCTTCTCATTTTC |
| -48 | 5 | ATAAATGATAATCATTATT | ||
| Salmonella typhimurium LT2 | STM0595 | -170 | 4.9 | AGAAATAATAATCATTATT |
| -164 | 4.4 | AATAATCATTATTATACAC | ||
|
Position: -83
Score: 5 Sequence: TATAATGATACGCATTATC
Locus tag: APECO1_1381
|
||||
| APECO1_1381 | -83 | 5 | TATAATGATACGCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fur | ||||
| Ortholog function: ferric uptake transcription regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0683 | -83 | 4.9 | TATAATGATACGCATTATC |
| Salmonella typhimurium LT2 | STM0693 | -82 | 4.9 | TATAATGATACGCATTATC |
| Enterobacter sp. 638 | Ent638_1198 | -83 | 4.5 | TATAATGAAACGCATTATC |
| Edwardsiella tarda EIB202 | ETAE_2610 | -193 | 4.4 | TATAATGAATCTCACTATT |
| Proteus mirabilis HI4320 | PMI0543 | -179 | 4.2 | AATATTGAGAATGATAATT |
| -173 | 4.5 | GAGAATGATAATTATTCAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1327 | -106 | 4.2 | GGTTTTCATTTTCATTAGC |
|
Position: -47
Score: 5.2 Sequence: TATAATGAGAATTATTATC
Position: -41
Score: 4.9 Sequence: GAGAATTATTATCATTAAA
Locus tag: APECO1_1333
|
||||
| APECO1_1333 | -47 | 5.2 | TATAATGAGAATTATTATC | |
| -41 | 4.9 | GAGAATTATTATCATTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmA | ||||
| Ortholog function: phosphoglyceromutase 1 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0755 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.7 | GAGAATTATTATCATTAAA | ||
| Salmonella typhimurium LT2 | STM0772 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.5 | GAGAATTATTATCATTACA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02381 | -46 | 5 | TATAATGAGAATTATTATC |
| -40 | 4.5 | GAGAATTATTATCATTCAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00768 | -96 | 4.6 | TATAATGAGAATAGTTATC |
| Enterobacter sp. 638 | Ent638_1246 | -164 | 4.7 | TATAATGAGAATTGTTATC |
| -158 | 4.1 | GAGAATTGTTATCATTCAA | ||
| Yersinia pestis KIM | y3048 | -103 | 5.3 | TATAATGATAATAATTATC |
| -97 | 4.6 | GATAATAATTATCATTGAA | ||
| Serratia proteamaculans 568 | Spro_1288 | -51 | 4.9 | TATAATGATTTTCGTTATC |
| Edwardsiella tarda EIB202 | ETAE_2569 | -49 | 4.6 | CATGATGATAATAATTATC |
| -43 | 5.3 | GATAATAATTATCATTATA | ||
|
Position: -129
Score: 4.3 Sequence: GATAATACTTATCAAAATT
Position: -123
Score: 4.4 Sequence: ACTTATCAAAATTATTATC
Position: -117
Score: 4.4 Sequence: CAAAATTATTATCACTTGC
Locus tag: APECO1_1286
|
||||
| APECO1_1286 | -129 | 4.3 | GATAATACTTATCAAAATT | |
| -123 | 4.4 | ACTTATCAAAATTATTATC | ||
| -117 | 4.4 | CAAAATTATTATCACTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fiu | ||||
| Ortholog function: iron outer membrane transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0805 | -123 | 4.4 | GCTTATCAAAATTATTATC |
| -117 | 4.5 | CAAAATTATTATCACTTTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01250 | -126 | 4.2 | GCAAATGATAACTATTCTT |
| -120 | 4.1 | GATAACTATTCTTTTTATC | ||
|
Position: -69
Score: 4.5 Sequence: CGTAATGATAATCGCTATC
Locus tag: APECO1_107
|
||||
| APECO1_107 | -69 | 4.5 | CGTAATGATAATCGCTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD | ||||
| Ortholog function: iron permease FTR1 | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01045 | -76 | 5 | TGTAATGATAATCACTATC |
| -70 | 4.2 | GATAATCACTATCATAAAT | ||
| Enterobacter sp. 638 | Ent638_1545 | -76 | 4.9 | CGTAATGATAATCACTATC |
| Erwinia amylovora ATCC 49946 | EAM_2059 | -80 | 4.6 | GATAATGATAATCCCTATC |
| Yersinia pestis KIM | y2452 | -84 | 4.4 | CAGAATGATAATCACAATC |
| -78 | 4.3 | GATAATCACAATCGTTTTA | ||
| Serratia proteamaculans 568 | Spro_2929 | -109 | 4.8 | CAGAATGATAATCACTATC |
|
Position: -95
Score: 5.5 Sequence: GCTAATGATAATCATTTTC
Position: -89
Score: 4.9 Sequence: GATAATCATTTTCATTTTG
Locus tag: APECO1_274
|
||||
| APECO1_274 | -95 | 5.5 | GCTAATGATAATCATTTTC | |
| -89 | 4.9 | GATAATCATTTTCATTTTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sitA | ||||
| Ortholog function: iron ABC transporter, periplasmic substrate-binding protein | ||||
| Salmonella typhimurium LT2 | STM2861 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04090 | -84 | 4.5 | GTAAATAAGAATTATTTTC |
| -78 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00940 | -111 | 4.1 | GATAAAGATAATTTTTCTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03078 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1111 | -98 | 4.9 | TTTAATGATAATTATTTTC |
| -92 | 4.5 | GATAATTATTTTCATTTAA | ||
| Yersinia pestis KIM | y1897 | -39 | 5.2 | GGTATTGATAATCATTTTC |
| -33 | 4.7 | GATAATCATTTTCATTTGT | ||
| Serratia proteamaculans 568 | Spro_2133 | -41 | 5.4 | GATATTGATAATCATTTTC |
| -35 | 4.6 | GATAATCATTTTCATTTGA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2392 | -53 | 5.1 | GATATTGATAATTATTCTC |
| Proteus mirabilis HI4320 | PMI1027 | -63 | 4.2 | TGAAATGATATTGATAATC |
| -57 | 5.5 | GATATTGATAATCATTATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2672 | -49 | 5.2 | GATATTGATAATCGTTATC |
| -43 | 4.5 | GATAATCGTTATCATATAC | ||
|
Position: -173
Score: 4.9 Sequence: GGTAATGAGAATAATTAAC
Locus tag: APECO1_358
|
||||
| APECO1_358 | -173 | 4.9 | GGTAATGAGAATAATTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA | ||||
| Ortholog function: oligopeptide ABC transporter; periplasmic binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1243 | -245 | 4.7 | GGTAATGAGAATAATTAAC |
| Citrobacter koseri ATCC BAA-895 | CKO_01320 | -247 | 4.3 | GGTGATGAGAATTATTTTC |
| -241 | 4 | GAGAATTATTTTCAATAAG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02197 | -216 | 4.4 | GCAAATGAGAATTATTTTT |
| Enterobacter sp. 638 | Ent638_2302 | -247 | 4 | GTAGATGAGAATGATTTTC |
|
Position: -157
Score: 4.8 Sequence: GGGAATGGTAATCATTATT
Locus tag: APECO1_591
|
||||
| APECO1_591 | -157 | 4.8 | GGGAATGGTAATCATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yncD | ||||
| Ortholog function: TonB-dependent siderophore outer membrane receptor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1451 | -157 | 4.7 | GGGAATGGTAATCATTATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01493 | -181 | 4.5 | GCGAATAGTAATCATTATT |
|
Position: -103
Score: 4.9 Sequence: AATAATGATTACCATTCCC
Locus tag: APECO1_592
|
||||
| APECO1_592 | -103 | 4.9 | AATAATGATTACCATTCCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yncE | ||||
| Ortholog function: putative receptor, ATP binding | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1452 | -103 | 4.6 | AATAATGATTACCATTCCC |
| Salmonella typhimurium LT2 | STM1586 | -103 | 5.2 | AATAATGATTATTATTCTC |
| Citrobacter koseri ATCC BAA-895 | CKO_01494 | -202 | 4.5 | AATAATGATTACTATTCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01908 | -103 | 4.5 | AATAATGATTACTATTCGC |
| Enterobacter sp. 638 | Ent638_2098 | -100 | 4.8 | AATAATGATTACTATTCTC |
| Serratia proteamaculans 568 | Spro_0586 | -143 | 4.8 | AATAATGATTACTATTCTC |
|
Position: -4
Score: 4.7 Sequence: GCTAATGATAACCATTCCC
Locus tag: APECO1_624
|
||||
| APECO1_624 | -4 | 4.7 | GCTAATGATAACCATTCCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yddA | ||||
| Ortholog function: fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1496 | -4 | 4.4 | GCTAATGATAACCATTCCC |
|
Position: -331
Score: 4.2 Sequence: TAAAGTTATTTTTATTTTC
Position: -268
Score: 4.6 Sequence: TCAAATGATAATAAATATC
Position: -262
Score: 4.2 Sequence: GATAATAAATATCACTTCA
Locus tag: APECO1_753
|
||||
| APECO1_753 | -331 | 4.2 | TAAAGTTATTTTTATTTTC | |
| -268 | 4.6 | TCAAATGATAATAAATATC | ||
| -262 | 4.2 | GATAATAAATATCACTTCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydhY | ||||
| Ortholog function: oxidoreductase, Fe-S subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1674 | -267 | 4.5 | TCAAATGATAATAAATATC |
| Citrobacter koseri ATCC BAA-895 | CKO_01699 | -215 | 4.4 | CTAAATGATAATAAATATC |
| Proteus mirabilis HI4320 | PMI0070 | -300 | 4.1 | ACTAACGATAATTAATTTT |
|
Position: -198
Score: 4.6 Sequence: TTAGATAATAATCATTATC
Position: -65
Score: 4.6 Sequence: TGAACTGATAATCATTATC
Position: -59
Score: 5.2 Sequence: GATAATCATTATCACTAAC
Locus tag: APECO1_761
|
||||
| APECO1_761 | -198 | 4.6 | TTAGATAATAATCATTATC | |
| -65 | 4.6 | TGAACTGATAATCATTATC | ||
| -59 | 5.2 | GATAATCATTATCACTAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: scaffold protein for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -65 | 4.4 | TGAACTGATAATCATTATC |
| -59 | 5.1 | GATAATCATTATCACTAAC | ||
| Salmonella typhimurium LT2 | STM1369 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01717 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Enterobacter sp. 638 | Ent638_1760 | -67 | 4.4 | TGAAGTGATAATCGTTATC |
| -61 | 4.7 | GATAATCGTTATCACTAAC | ||
| Yersinia pestis KIM | y1934 | -129 | 4.5 | TGAAGTGATAATTATTATC |
| -123 | 4.8 | GATAATTATTATCACTACC | ||
| Serratia proteamaculans 568 | Spro_2179 | -77 | 4.4 | TGAAGTGATAATCGTTATC |
| -71 | 4.7 | GATAATCGTTATCACTAAC | ||
| Proteus mirabilis HI4320 | PMI1416 | -66 | 4.4 | GATAAGGGTTATCATTACC |
| -60 | 4 | GGTTATCATTACCATTAGA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -87 | 4.4 | GATAAAGGTTATCATTACC |
| -81 | 4.3 | GGTTATCATTACCATTATA | ||
|
Position: -126
Score: 3.7 Sequence: GGTAATGCGTTTTATTCCC
Position: -94
Score: 4.1 Sequence: ATAAATGATATTTATATTT
Locus tag: APECO1_950
|
||||
| APECO1_950 | -126 | 3.7 | GGTAATGCGTTTTATTCCC | |
| -94 | 4.1 | ATAAATGATATTTATATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftnA | ||||
| Ortholog function: ferritin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1905 | -127 | 3.4 | GgTAATGcgttTtATTccC |
| -121 | 3 | GcgttTtATtccCATTcgt | ||
| Salmonella typhimurium LT2 | STM1935 | -100 | 4 | AATAATTAAATTTAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01042 | -97 | 4.3 | AATAATTAAATTTATTATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02402 | -161 | 4 | ATAAATTAAAAGCATTCTC |
| -155 | 3.8 | TAAAAGCATTCTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_2486 | -103 | 3.7 | TATTTTAATAAATAATATC |
| -97 | 3.6 | AATAAATAATATCTTTATT | ||
| Erwinia amylovora ATCC 49946 | EAM_2940 | -131 | 4.4 | TGGAATGATTATCAATTAC |
| Yersinia pestis KIM | y2524 | -93 | 4.4 | AATAATGTGAATGATTATC |
| -87 | 4.1 | GTGAATGATTATCATGATG | ||
| Serratia proteamaculans 568 | Spro_1942 | -174 | 4.5 | GAAAATAGTTATCATAATT |
| -168 | 4 | AGTTATCATAATTATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2473 | -158 | 4.6 | TTAAATGATAATGAATATC |
| -152 | 4.8 | GATAATGAATATCAATAGC | ||
| Proteus mirabilis HI4320 | PMI1007 | -184 | 4.7 | GTTAATGATAATCAATTCC |
| -178 | 4.1 | GATAATCAATTCCATTAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2689 | -147 | 4.4 | TTAAATGAGATTCATTTTC |
| -141 | 4.4 | GAGATTCATTTTCATTTTT | ||
|
Position: -38
Score: 4.5 Sequence: ATAAATGATACTCACTCTC
Locus tag: APECO1_957
|
||||
| APECO1_957 | -38 | 4.5 | ATAAATGATACTCACTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdiA | ||||
| Ortholog function: transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1916 | -38 | 4.4 | ATAAATGATACTCACTCTC |
| Salmonella typhimurium LT2 | STM1950 | -44 | 4.4 | ATTCATAATAATGATTATC |
| -38 | 5.3 | AATAATGATTATCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01029 | -44 | 4.4 | AAACATTATAATGATTATC |
| -38 | 5 | TATAATGATTATCAATCTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02414 | -78 | 4.6 | ATTTATAATAATGATTATC |
| -72 | 4.4 | AATAATGATTATCAATCAG | ||
| Enterobacter sp. 638 | Ent638_2503 | -39 | 4.2 | AATAATGATTAGTTTTTTC |
|
Position: -95
Score: 5 Sequence: GATAATGGTTATTATTCAC
Locus tag: APECO1_1056
|
||||
| APECO1_1056 | -95 | 5 | GATAATGGTTATTATTCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybtP | ||||
| Ortholog function: yersiniabactin-iron ABC transporter, ATPase/permease components | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_01250 | -191 | 4.4 | GTTATTGATAATGGTTATT |
| -185 | 4.7 | GATAATGGTTATTATTCAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00913 | -191 | 4.4 | GTTATTGATAATGGTTATT |
| -185 | 4.7 | GATAATGGTTATTATTCAC | ||
| Yersinia pestis KIM | y2397 | -101 | 4.4 | GTTATTGATAATGGTTATT |
| -95 | 4.7 | GATAATGGTTATTATTCAC | ||
|
Position: -90
Score: 5 Sequence: GTGAATAATAACCATTATC
Position: -84
Score: 4.8 Sequence: AATAACCATTATCAATAAC
Locus tag: APECO1_1057
|
||||
| APECO1_1057 | -90 | 5 | GTGAATAATAACCATTATC | |
| -84 | 4.8 | AATAACCATTATCAATAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybtA | ||||
| Ortholog function: AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00912 | -90 | 4.7 | GTGAATAATAACCATTATC |
| -84 | 4.6 | AATAACCATTATCAATAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01249 | -90 | 4.7 | GTGAATAATAACCATTATC |
| -84 | 4.6 | AATAACCATTATCAATAAC | ||
| Yersinia pestis KIM | y2398 | -90 | 4.7 | GTGAATAATAACCATTATC |
| -84 | 4.6 | AATAACCATTATCAATAAC | ||
|
Position: -45
Score: 5.2 Sequence: GTTAATAATTATTATTCTC
Locus tag: APECO1_1058
|
||||
| APECO1_1058 | -45 | 5.2 | GTTAATAATTATTATTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: irp2 | ||||
| Ortholog function: non-ribosomal peptide synthase (siderophore synthase) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00911 | -63 | 4.9 | GTTAATAATTATTATTCTC |
| Yersinia pestis KIM | y2399 | -63 | 5.1 | GTTAATAATTATTATTATC |
|
Position: -74
Score: 4.8 Sequence: AGAAATAGTTATCATTTTC
Locus tag: APECO1_1063
|
||||
| APECO1_1063 | -74 | 4.8 | AGAAATAGTTATCATTTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fyuA | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00905 | -74 | 4.6 | AGAAATAGTTATCATTTTC |
| Citrobacter koseri ATCC BAA-895 | CKO_01243 | -74 | 4.6 | AGAAATAGTTATCATTTTC |
| Yersinia pestis KIM | y2404 | -74 | 4.6 | AGAAATAGTTATCATTTTC |
| Proteus mirabilis HI4320 | PMI2596 | -64 | 4.2 | GCAAATGATATTAATTCGC |
| -58 | 4.4 | GATATTAATTCGCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2316 | -160 | 5.1 | ATTAATGAGAATCATTATC |
| -154 | 4.6 | GAGAATCATTATCAATAGT | ||
|
Position: -68
Score: 4.9 Sequence: GAGTTTGATAATCATTCTC
Position: -62
Score: 4.8 Sequence: GATAATCATTCTCATTTAA
Locus tag: APECO1_4146
|
||||
| APECO1_4146 | -68 | 4.9 | GAGTTTGATAATCATTCTC | |
| -62 | 4.8 | GATAATCATTCTCATTTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mntH | ||||
| Ortholog function: Mn2+/Fe2+ transporter, NRAMP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2392 | -68 | 4.7 | GAATTTGATAATCATTCTC |
| -62 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Salmonella typhimurium LT2 | STM2408 | -68 | 4.5 | GCACTTGATAATCATTATC |
| -62 | 4.8 | GATAATCATTATCAATAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00404 | -50 | 4.3 | GCACTTGATAATCATTCTC |
| -44 | 4.5 | GATAATCATTCTCAATAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02743 | -68 | 4.3 | GAACTTGATAATCATTCGC |
| -62 | 4.3 | GATAATCATTCGCATTTTG | ||
| Enterobacter sp. 638 | Ent638_2926 | -67 | 4.8 | GATCTTGATAATCATTCTC |
| -61 | 4.8 | GATAATCATTCTCATTTTG | ||
| Yersinia pestis KIM | y1500 | -78 | 4 | GCGCTTGATAATTATTCTC |
| -72 | 4.6 | GATAATTATTCTCATTTAA | ||
| Serratia proteamaculans 568 | Spro_3415 | -66 | 4.3 | GCACTTGATAATTATTATC |
| -60 | 5.2 | GATAATTATTATCATTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0843 | -63 | 4.5 | GCACTTGATAATCATTATC |
| -57 | 5.2 | GATAATCATTATCATTTTT | ||
| Edwardsiella tarda EIB202 | ETAE_1142 | -134 | 4.5 | GCAGTTGATAATCATTATC |
|
Position: -82
Score: 4.2 Sequence: AGTAATGAGAACGACTATC
Locus tag: APECO1_3418
|
||||
| APECO1_3418 | -82 | 4.2 | AGTAATGAGAACGACTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exbB | ||||
| Ortholog function: TonB-dependent siderophore transporter component ExbB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3006 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Salmonella typhimurium LT2 | STM3159 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Citrobacter koseri ATCC BAA-895 | CKO_04401 | -97 | 4.1 | AGTAATGAGAACGACTATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03426 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Enterobacter sp. 638 | Ent638_3417 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Yersinia pestis KIM | y3495 | -71 | 4.8 | ACTAATGATAATTACTATC |
| Serratia proteamaculans 568 | Spro_4211 | -94 | 4.4 | AATAATGAGAACTACTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0358 | -206 | 4.3 | AATAATGAGAACGACTATC |
| Proteus mirabilis HI4320 | PMI0029 | -170 | 4.8 | AGTAATGATAATTACTATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3941 | -98 | 5.1 | AATAATGATAATTACTATC |
|
Position: -345
Score: 4.7 Sequence: AAAAATAAAACTCATTCTC
Position: -117
Score: 4.3 Sequence: TTGAATGATTCTCAATTAC
Locus tag: APECO1_3384
|
||||
| APECO1_3384 | -345 | 4.7 | AAAAATAAAACTCATTCTC | |
| -117 | 4.3 | TTGAATGATTCTCAATTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_02848 | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02848 | -175 | 4.1 | TTGAATGATTCTCAATTAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02105 | -210 | 4.1 | TTGAATGATTCTCAATTAC |
| Enterobacter sp. 638 | Ent638_3442 | -118 | 4.1 | TTGAATGATTCTCAATTAC |
| Yersinia pestis KIM | y3343 | -41 | 4.2 | ACAAACGATTTTGATTATC |
| -35 | 4.6 | GATTTTGATTATCATTCGC | ||
| Serratia proteamaculans 568 | Spro_1016 | -52 | 4.3 | GCTAATGAGAGTGATTATC |
|
Position: -216
Score: 4 Sequence: AAGTATAAAAATGATTTTT
Position: -71
Score: 4.3 Sequence: ATGATTAACAATCATTATC
Position: -65
Score: 4.9 Sequence: AACAATCATTATCATTTGC
Locus tag: APECO1_3346
|
||||
| APECO1_3346 | -216 | 4 | AAGTATAAAAATGATTTTT | |
| -71 | 4.3 | ATGATTAACAATCATTATC | ||
| -65 | 4.9 | AACAATCATTATCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqjH | ||||
| Ortholog function: FAD-binding 9, siderophore-interacting domain protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3070 | -71 | 4.2 | ATGATTAACAATCATTATC |
| -65 | 4.6 | AACAATCATTATCATTTGC | ||
| Salmonella typhimurium LT2 | STM3214 | -62 | 4.3 | AACAATCATTATCATTTAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03499 | -62 | 4.5 | GGCAATCATTATCATTTGC |
| Enterobacter sp. 638 | Ent638_3524 | -61 | 4.1 | AGCAATCATTATCATTTAA |
|
Position: -318
Score: 4.2 Sequence: TGAAATAAGAACTATTTTC
Position: -312
Score: 4.1 Sequence: AAGAACTATTTTCATTTAT
Locus tag: APECO1_3116
|
||||
| APECO1_3116 | -318 | 4.2 | TGAAATAAGAACTATTTTC | |
| -312 | 4.1 | AAGAACTATTTTCATTTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfr | ||||
| Ortholog function: bacterioferrin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3336 | -51 | 3.9 | tgaAATaAgAActATTtTC |
| -45 | 3.9 | aAgAActATttTCATTtat | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04743 | -55 | 4.3 | TGTAATCATAACTATTCTC |
| -49 | 4.2 | CATAACTATTCTCATTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03722 | -55 | 4.6 | TGTAATCATAACCATTCTC |
| -49 | 3.9 | cATAAccATtcTCATTtaa | ||
|
Position: -309
Score: 5.6 Sequence: GATAATAATTCTCATTATC
Locus tag: APECO1_2948
|
||||
| APECO1_2948 | -309 | 5.6 | GATAATAATTCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemR | ||||
| Ortholog function: TonB-dependent outer membrane hemin receptor | ||||
| Enterobacter sp. 638 | Ent638_1741 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
|
Position: -48
Score: 4.5 Sequence: TCAAATGATAATCATGATC
Position: -42
Score: 5 Sequence: GATAATCATGATCATTCTC
Locus tag: APECO1_2947
|
||||
| APECO1_2947 | -48 | 4.5 | TCAAATGATAATCATGATC | |
| -42 | 5 | GATAATCATGATCATTCTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemT | ||||
| Ortholog function: hemin ABC transporter, substrate-binding protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02655 | -45 | 4.2 | GCGAATGATAATGATGATC |
| -39 | 4.7 | GATAATGATGATCATTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03089 | -133 | 4 | GATAATACCTATCATTACC |
| Enterobacter sp. 638 | Ent638_1739 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
| Erwinia amylovora ATCC 49946 | EAM_1641 | -65 | 4.2 | TTTGTTGATAATGATTATC |
| -59 | 4.8 | GATAATGATTATCATTCCA | ||
| Yersinia pestis KIM | y0541 | -48 | 3.7 | GATAATGCTTATCACACTG |
| -30 | 4.1 | GATAGTCGTTATCATTAAG | ||
| Serratia proteamaculans 568 | Spro_2167 | -68 | 4 | TCACATGATAATGATTCTC |
| -62 | 4.6 | GATAATGATTCTCACTTTG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1845 | -59 | 4.7 | GAAAATGATTCTCATTCAT |
| Edwardsiella tarda EIB202 | ETAE_1799 | -10 | 4.1 | TTATACGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTAAG | ||
| Proteus mirabilis HI4320 | PMI1428 | -52 | 5.1 | GATAACGATAATGATTATC |
| -46 | 5.4 | GATAATGATTATCATAATC | ||
| -40 | 4.4 | GATTATCATAATCATAACC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2634 | -54 | 4.7 | TATAACGATAATAATTCTC |
| -48 | 4.6 | GATAATAATTCTCACTATG | ||
|
Position: -93
Score: 4.9 Sequence: GGCATTGATAATCATTTTC
Position: -87
Score: 5.2 Sequence: GATAATCATTTTCAATATC
Locus tag: APECO1_2560
|
||||
| APECO1_2560 | -93 | 4.9 | GGCATTGATAATCATTTTC | |
| -87 | 5.2 | GATAATCATTTTCAATATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: manganese/iron superoxide dismutase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3908 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Salmonella typhimurium LT2 | STM4055 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03093 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4.4 | GATAAGCATTTTCAATATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04217 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4 | GATAAGCATTTTCAATACC | ||
| Enterobacter sp. 638 | Ent638_4063 | -100 | 4.7 | GGCATTGATAATCATTTTC |
| -94 | 5 | GATAATCATTTTCAATATC | ||
| Yersinia pestis KIM | y4080 | -104 | 4.4 | AGGTTTGATAATCATTTTC |
| -98 | 5 | GATAATCATTTTCAATATC | ||
| Serratia proteamaculans 568 | Spro_0081 | -105 | 4.7 | GGCATTGATAATCATTTTC |
| -99 | 5 | GATAATCATTTTCAATATC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0092 | -105 | 4.9 | AATAATCATTTTCAATATC |
| Proteus mirabilis HI4320 | PMI3036 | -95 | 4.6 | GGATATGATAATGATTTTC |
| -89 | 5.2 | GATAATGATTTTCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0075 | -102 | 4.3 | GGTATTGATAAGCATTTCC |
|
Position: -99
Score: 4.7 Sequence: GATAATTTTTATCATTTGC
Locus tag: APECO1_2057
|
||||
| APECO1_2057 | -99 | 4.7 | GATAATTTTTATCATTTGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuF | ||||
| Ortholog function: ferric iron reductase involved in ferric hydroximate transport | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4367 | -122 | 5.1 | GATAATGATAACCAATATC |
| -99 | 4.5 | GATAATTTTTATCATTTGC | ||
| -34 | 4 | AGCAATCATTATCATTTAG | ||
| Salmonella typhimurium LT2 | STM4550 | -238 | 4 | GGAATTGATAATGATAACC |
| -232 | 5.1 | GATAATGATAACCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03429 | -234 | 4.8 | GATAATGATAACCAATAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04821 | -44 | 4.5 | AATATCAGTAATCATTATC |
| -38 | 4.4 | AGTAATCATTATCATTTAG | ||
| Enterobacter sp. 638 | Ent638_0527 | -237 | 5.1 | GATAATGATAACCAATATC |
| Yersinia pestis KIM | y2642 | -67 | 4.9 | GCTATTGATAATCACTATC |
| -61 | 4.4 | GATAATCACTATCATTCTG | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4627 | -100 | 4.3 | GACAATGATAATAATAATA |
| -94 | 5.3 | GATAATAATAATAATTATC | ||
| -88 | 4.9 | AATAATAATTATCATAATT | ||
| -82 | 4.1 | AATTATCATAATTATATTT | ||
|
Position: 2
Score: 5.3 Sequence: GATATTGGTTATCATTATC
Locus tag: APECO1_2056
|
||||
| APECO1_2056 | 2 | 5.3 | GATATTGGTTATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjjZ | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4567 | -60 | 4.4 | GCAAATGATAAAAATTATC |
| -37 | 5.2 | GATATTGGTTATCATTATC | ||
| Salmonella typhimurium LT2 | STM4552 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4.2 | GGTTATCATTATCAATTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03427 | 2 | 4.9 | GCTATTGGTTATCATTATC |
| 8 | 4.1 | GGTTATCATTATCGGTATC | ||
| Enterobacter sp. 638 | Ent638_0529 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4 | GGTTATCATTATCATATTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0565 | -70 | 4.3 | CAAAGTGATAATGATTAAC |
| -64 | 4.3 | GATAATGATTAACATATGC | ||
| -47 | 4.9 | GCTATTGGTAATCATTATC | ||
| -41 | 4.8 | GGTAATCATTATCATTTAT | ||
| Yersinia pestis KIM | y3754 | -4 | 4.9 | GATATTGGTTATGATTATC |
| 2 | 5.2 | GGTTATGATTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_0646 | -39 | 4.7 | GATATTAGTTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0738 | -89 | 5 | GATATTAGTTATCATTATC |
| -83 | 4.5 | AGTTATCATTATCATTTTT | ||
| Proteus mirabilis HI4320 | PMI2497 | -27 | 5.3 | AATAATGAAAATCATTATC |
| -21 | 5.2 | GAAAATCATTATCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4253 | -92 | 5.2 | GATATTGGTAATCATTATC |
| -86 | 4.7 | GGTAATCATTATCATTTGT | ||
|
Position: -71
Score: 4.8 Sequence: AATAATGAGTTTCATTTGC
Locus tag: APECO1_O1CoBM102
|
||||
| APECO1_O1CoBM102 | -71 | 4.8 | AATAATGAGTTTCATTTGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: eitA | ||||
| Ortholog function: citrate-dependent iron(III) ABC transporter, peiplasmic component | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02149 | -101 | 4.6 | AATAATGAGTTTCATTTGC |
| Enterobacter sp. 638 | Ent638_3205 | -73 | 4.8 | TAAAATGAGTTTCATTATC |
| -67 | 4.2 | GAGTTTCATTATCATTAAA | ||
|
Position: -4
Score: 5.4 Sequence: GATAATGAGAATCATTATT
Position: 17
Score: 4.2 Sequence: CATAATTGTTATTATTTTA
Locus tag: APECO1_O1CoBM172
|
||||
| APECO1_O1CoBM172 | -4 | 5.4 | GATAATGAGAATCATTATT | |
| 17 | 4.2 | CATAATTGTTATTATTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iucA2 | ||||
| Ortholog function: aerobactin synthetase (subunit alpha) | ||||
| Yersinia pestis KIM | y3380 | -63 | 4.8 | GATAATGATAACCACTATT |
| Yersinia pestis KIM | y3381 | -63 | 4.8 | GATAATGATAACCACTATT |
| Serratia proteamaculans 568 | Spro_0922 | -63 | 4.2 | GATAACAATAAATATTATT |
| -45 | 4.1 | TGATATAAGAATCATTCTC | ||
|
Position: -93
Score: 5.1 Sequence: GCTAATGATAATTATTTAC
Position: -87
Score: 4.3 Sequence: GATAATTATTTACATTTTA
Locus tag: APECO1_O1CoBM180
|
||||
| APECO1_O1CoBM180 | -93 | 5.1 | GCTAATGATAATTATTTAC | |
| -87 | 4.3 | GATAATTATTTACATTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sitA | ||||
| Ortholog function: iron ABC transporter, periplasmic substrate-binding protein | ||||
| Salmonella typhimurium LT2 | STM2861 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04090 | -84 | 4.5 | GTAAATAAGAATTATTTTC |
| -78 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00940 | -111 | 4.1 | GATAAAGATAATTTTTCTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03078 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1111 | -98 | 4.9 | TTTAATGATAATTATTTTC |
| -92 | 4.5 | GATAATTATTTTCATTTAA | ||
| Yersinia pestis KIM | y1897 | -39 | 5.2 | GGTATTGATAATCATTTTC |
| -33 | 4.7 | GATAATCATTTTCATTTGT | ||
| Serratia proteamaculans 568 | Spro_2133 | -41 | 5.4 | GATATTGATAATCATTTTC |
| -35 | 4.6 | GATAATCATTTTCATTTGA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2392 | -53 | 5.1 | GATATTGATAATTATTCTC |
| Proteus mirabilis HI4320 | PMI1027 | -63 | 4.2 | TGAAATGATATTGATAATC |
| -57 | 5.5 | GATATTGATAATCATTATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2672 | -49 | 5.2 | GATATTGATAATCGTTATC |
| -43 | 4.5 | GATAATCGTTATCATATAC | ||