Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LsrR regulog to Xenorhabdus bovienii SS-2004

Reference regulog properties
Source regulog: LsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: SorC
Regulation mode: repressor
Biological process: Quorum sensing; Biofilm formation
Effector: 4,5-dihydroxypentan-2,3-dione
Phylum: Proteobacteria
Propagated regulon:
Target genome Xenorhabdus bovienii SS-2004
Orthologous TF(s) XBJ1_4108
Regulated genes 1
Built upon 19 sites [see more]
Predicted regulatory interactions in Xenorhabdus bovienii SS-2004
Locus tag Position Score Sequence
Position: -300
Score: 6.5
Sequence: GAACATTTATCAATTTAAAATACTTTTGTTC
Locus tag: XBJ1_4108
XBJ1_4108 -300 6.5 GAACATTTATCAATTTAAAATACTTTTGTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lsrR
Ortholog function: Quorum sensing transcriptional repgulator of LsrR, SorC family
Enterobacter sp. 638 Ent638_3537 -201 6.6 GAACAAATGATTTTTTGATTTAATAATGTTC
-35 6 GAACATATGATCTAAATTTTTATAAGAGTTC
Escherichia coli str. K-12 substr. MG1655 b1512 -216 6.6 GAACAAATGTATTTCTGCTTTTAATTTGTTC
-48 6.7 GAACAATTGCATTAAAGATTTAAATATGTTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03508 -203 6.7 GAACAAATGATTTTTAAATTTAATAATGTTC
-36 6 GAACATATGATCTAAATTTTTATAAGAGTTC
Photorhabdus luminescens subsp. laumondii TTO1 plu3142 -184 6.8 GAACATTTATCTATTTAAAAAACAATTGTTC
Salmonella typhimurium LT2 STM4073 -219 6.6 GAACAAATGTTTTTTGAAAAAGAAATTGTTC
-53 6.5 GAACAATTGTGTTAATGATTTAGAAATGTTC