Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NsrR regulog to Xenorhabdus bovienii SS-2004

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Xenorhabdus bovienii SS-2004
Orthologous TF(s) XBJ1_0326
Regulated genes 2
Built upon 73 sites [see more]
Predicted regulatory interactions in Xenorhabdus bovienii SS-2004
Locus tag Position Score Sequence
Position: -318
Score: 3.6
Sequence: GATTGATTCAGAATACCAC
Locus tag: XBJ1_2494
XBJ1_2494 -318 3.6 GATTGATTCAGAATACCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodB
Ortholog function: Superoxide dismutase [Fe] (EC 1.15.1.1)
Escherichia coli str. K-12 substr. MG1655 b1656 -217 4.8 GTTGCATTTCAAATATTCG
Salmonella typhimurium LT2 STM1431 -185 4.3 GTTGTATACAAAATATCTT
Enterobacter sp. 638 Ent638_1791 -223 3.9 GTTGCATTCGCAATATAGT
Edwardsiella tarda EIB202 ETAE_1676 -172 4.1 CAGTCAGCTAAAATACACC
Proteus mirabilis HI4320 PMI1397 -69 3.5 AATTCAGTTGAATTAGATG
Position: -62
Score: 5.6
Sequence: GTTGTATTTAAAATGCATG
Locus tag: XBJ1_3034
XBJ1_3034 -62 5.6 GTTGTATTTAAAATGCATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Escherichia coli str. K-12 substr. MG1655 b2552 -47 5.7 GATGCATTTGAGATACATC
Salmonella typhimurium LT2 STM2556 -79 4.8 GATCCATTTACAATGCAAG
-47 5.8 GATGCATTTGATATACATC
Citrobacter koseri ATCC BAA-895 CKO_00235 -47 5.5 GATGTATTTGACATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02877 -47 6.3 GATGCATTTAAAATGCATC
Enterobacter sp. 638 Ent638_3037 -47 6.2 GATGCATATAAAATACATC
Yersinia pestis KIM y1321 -58 6.1 GATGCATTTAAAATACATG
Serratia proteamaculans 568 Spro_3639 -59 6 GATGCATTTAAAATGCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3251 -51 5.9 GATTCATATAAAATACAAC
Edwardsiella tarda EIB202 ETAE_2822 -45 6.2 GTTGCATTTAAAATACAAC
Proteus mirabilis HI4320 PMI1868 -61 5.4 GTTGTATTAAAAATACATG
Photorhabdus luminescens subsp. laumondii TTO1 plu3292 -64 5.4 GTTGCATTTAAATTACATG
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