Propagation of ExuR regulog to Enterobacter sakazakii ATCC BAA-894
| Source regulog: | ExuR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization |
| Effector: | Galacturonate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Enterobacter sakazakii ATCC BAA-894 |
| Orthologous TF(s) | ESA_03505 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -164
Score: 4.8 Sequence: AAAGTTATATGACAACAAA
Position: -33
Score: 5.7 Sequence: ATATTGGTATAACAACTTT
Locus tag: ESA_01068
|
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| ESA_01068 | -164 | 4.8 | AAAGTTATATGACAACAAA | |
| -33 | 5.7 | ATATTGGTATAACAACTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuA | ||||
| Ortholog function: Mannonate dehydratase (EC 4.2.1.8) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00609 | -31 | 5.3 | AATTTGGTATAACAACTTG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02604 | -34 | 5.5 | TTATTGGTATAACAACTTT |
| Enterobacter sp. 638 | Ent638_2767 | -32 | 5.7 | ATATTGGTATAACAACTTT |
| Yersinia pestis KIM | y2902 | -240 | 5.2 | AAATCGGTATAACAACATT |
| Serratia proteamaculans 568 | Spro_3238 | -80 | 5 | AATTTGGTATAACAAGATT |
| Edwardsiella tarda EIB202 | ETAE_2289 | -101 | 4.7 | GATTTGGTATGACAGATTA |
|
Position: -162
Score: 4.8 Sequence: AAAGTTGTACGACAACCTG
Locus tag: ESA_02511
|
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| ESA_02511 | -162 | 4.8 | AAAGTTGTACGACAACCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaR | ||||
| Ortholog function: putative transcriptional regulator, LacI family | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02295 | -157 | 5.8 | TAAGTTGTGTGACAAGTTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00854 | -195 | 4.5 | TCATTGGTATAACTAGTAT |
| Enterobacter sp. 638 | Ent638_1314 | -175 | 5.6 | GAAGTTGTGTGACAAGTTC |
| Serratia proteamaculans 568 | Spro_3600 | -196 | 4.8 | TAATTGGACTGATAAATCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -176 | 4.8 | AAATTGGTTTACCAAATTG |
|
Position: -125
Score: 4.4 Sequence: AAACGTGTATGACAACCCC
Locus tag: ESA_02512
|
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| ESA_02512 | -125 | 4.4 | AAACGTGTATGACAACCCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaT | ||||
| Ortholog function: Putative MFS superfamily hexuronate transporter | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02296 | -59 | 4.6 | AAATTTGTGTGACACCAAA |
| Enterobacter sp. 638 | Ent638_1313 | -60 | 4.4 | TAATCTGTGTGACAACCGA |
| Serratia proteamaculans 568 | Spro_3599 | -209 | 5.2 | GAATTGGTATACCAACTTT |
|
Position: -69
Score: 6.2 Sequence: AAATTGGTGTGATAACTTT
Locus tag: ESA_03503
|
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| ESA_03503 | -69 | 6.2 | AAATTGGTGTGATAACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3092 | -71 | 6.2 | AAATTGGTGTGATAACTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04494 | -8 | 6.2 | AAATTGGTGTGATAACTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03520 | -90 | 6.2 | AAATTGGTGTGATAACTTT |
| Enterobacter sp. 638 | Ent638_3546 | -70 | 6.2 | AAATTGGTGTGATAACTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0645 | -67 | 5.4 | TAATTGGTGTGATATCTTT |
|
Position: -239
Score: 5.7 Sequence: AAAGCTGTATGACAAGTTA
Locus tag: ESA_03504
|
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| ESA_03504 | -239 | 5.7 | AAAGCTGTATGACAAGTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuT | ||||
| Ortholog function: Hexuronate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3093 | -129 | 6.2 | AAAGTTGTATGACAAGTTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04495 | -227 | 5.7 | GAAGTTGTATGACAAGTTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03521 | -240 | 6.2 | AAAGTTGTATGACAAGTTA |
| Enterobacter sp. 638 | Ent638_3547 | -116 | 6.2 | AAAGTTGTATGACAAGTTA |
| Yersinia pestis KIM | y3601 | -515 | 5.6 | AAAtctGTATGACAAgTTa |
| Serratia proteamaculans 568 | Spro_4322 | -157 | 5.6 | AAATCTGTATGACAAGTTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0644 | -185 | 6.2 | AAAGTTGTATGACAAATTA |
| Edwardsiella tarda EIB202 | ETAE_0435 | -282 | 5.2 | GAATCTGTATGACAAGTTA |
|
Position: -48
Score: 6.1 Sequence: AAAGTGGTATAACAAATCT
Locus tag: ESA_03505
|
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| ESA_03505 | -48 | 6.1 | AAAGTGGTATAACAAATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuR | ||||
| Ortholog function: D-galacturonate transcriptional repressor, GntR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3094 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04496 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03522 | -48 | 5.8 | AAAGTGGTATAACAAATCG |
| Enterobacter sp. 638 | Ent638_3548 | -45 | 6.1 | AAAGTGGTATAACAAATCA |
| Yersinia pestis KIM | y3602 | -105 | 5.8 | TAAGTGGTATAACAAATCC |
| Serratia proteamaculans 568 | Spro_4323 | -57 | 5.8 | TAAGTGGTATAACAAATCC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0643 | -98 | 5.9 | TAAGTGGTATAACAAATCA |
| Edwardsiella tarda EIB202 | ETAE_0434 | -68 | 5.8 | AAAGTGGTATAACAACTCG |