Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GntR regulog to Erwinia carotovora subsp. atroseptica SCRI1043

Reference regulog properties
Source regulog: GntR - Enterobacteriales  
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Erwinia carotovora subsp. atroseptica SCRI1043
Orthologous TF(s) ECA4160, ECA1838
Regulated genes 4
Built upon 61 sites [see more]
Predicted regulatory interactions in Erwinia carotovora subsp. atroseptica SCRI1043
Locus tag Position Score Sequence
Position: -91
Score: 5.4
Sequence: ACTTGTTACCGGTATCATGA
Locus tag: ECA1839
ECA1839 -91 5.4 ACTTGTTACCGGTATCATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Yersinia pestis KIM y3876 -91 5.6 ATTTGTTACCGGTATCATGA
-77 5.5 TCATGATACCGGTAACATGG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4159 -77 5.3 ATATGATACGGGTAACATGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1839 -91 5.4 ACTTGTTACCGGTATCATGA
-77 5.1 TCATGATACCGGTAACGTGA
Position: -239
Score: 5.5
Sequence: TCACGTTACCGGTATCATGA
Position: -225
Score: 5.6
Sequence: TCATGATACCGGTAACAAGT
Locus tag: ECA1840
ECA1840 -239 5.5 TCACGTTACCGGTATCATGA
-225 5.6 TCATGATACCGGTAACAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntT
Ortholog function: High-affinity H+/gluconate symporter
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1840 -239 5.5 TCACGTTACCGGTATCATGA
-225 5.6 TCATGATACCGGTAACAAGT
Position: -100
Score: 5.5
Sequence: ACATGTTACCCGTATCATAT
Locus tag: ECA4158
ECA4158 -100 5.5 ACATGTTACCCGTATCATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntU
Ortholog function: Low-affinity gluconate transporter
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4158 -100 5.5 ACATGTTACCCGTATCATAT
Position: -77
Score: 5.3
Sequence: ATATGATACGGGTAACATGT
Locus tag: ECA4159
ECA4159 -77 5.3 ATATGATACGGGTAACATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Yersinia pestis KIM y3876 -91 5.6 ATTTGTTACCGGTATCATGA
-77 5.5 TCATGATACCGGTAACATGG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4159 -77 5.3 ATATGATACGGGTAACATGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1839 -91 5.4 ACTTGTTACCGGTATCATGA
-77 5.1 TCATGATACCGGTAACGTGA
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