Propagation of Crp regulog to Erwinia carotovora subsp. atroseptica SCRI1043
| Source regulog: | Crp - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Erwinia carotovora subsp. atroseptica SCRI1043 |
| Orthologous TF(s) | ECA4064 |
| Regulated genes | 170 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -265
Score: 4.2 Sequence: CTTTGTGATCCCTTTCACGGTG
Locus tag: ECA0029
|
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| ECA0029 | -265 | 4.2 | CTTTGTGATCCCTTTCACGGTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnA | ||||
| Ortholog function: glutamine synthetase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3870 | -269 | 4.2 | CTTTGTGATCGCTTTCACGGAG |
| Salmonella typhimurium LT2 | STM4007 | -272 | 4.2 | CTTTGTGATCGCTTTCACGGAG |
| -114 | 3.8 | CAATGTGAAAGTTGGCACAGAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03140 | -250 | 4.2 | CTTTGTGATCGCTTTCACGGAG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04178 | -299 | 3.9 | CTTTGTGACCGCTTTCACGGAG |
| Serratia proteamaculans 568 | Spro_4881 | -267 | 4 | GTATGTGATCCCTTTCACGGTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0029 | -265 | 4.2 | CTTTGTGATCCCTTTCACGGTG |
| Edwardsiella tarda EIB202 | ETAE_3493 | -267 | 4.2 | GTTTGTGATCCTATTCACGATG |
| Proteus mirabilis HI4320 | PMI2882 | -270 | 4.7 | AATTGTGATCCTTTTCACGCCT |
| -215 | 3.8 | AATTGTGCAACTATTCAGACTT | ||
| -181 | 3.9 | ATTTGTGCAATAATTAAAAAAT | ||
|
Position: -234
Score: 3.6 Sequence: TTTTGTTATATAACAAAAACTT
Position: 27
Score: 3.7 Sequence: TTTCTTGATTCTGTTCAACAAC
Locus tag: ECA0051
|
||||
| ECA0051 | -234 | 3.6 | TTTTGTTATATAACAAAAACTT | |
| 27 | 3.7 | TTTCTTGATTCTGTTCAACAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gdhA | ||||
| Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1761 | -106 | 3.5 | TTTCTTGCTTACCGTCACATTC |
| Salmonella typhimurium LT2 | STM1299 | -107 | 3.6 | TTTCTTGCTTACCGTCACATTG |
| -55 | 3.6 | TATTCTGATAAAACGCAAATAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01789 | -107 | 3.4 | TTTCTTGCTTACCGTCACACTG |
| Enterobacter sp. 638 | Ent638_1685 | -110 | 3.3 | AATTTTCACTTGCCTCGCAAAG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0051 | -234 | 3.6 | TTTTGTTATATAACAAAAACTT |
| Proteus mirabilis HI4320 | PMI3008 | -195 | 3.4 | AATCCTGATTTTATTAGCCTTT |
| -88 | 3.5 | AAACAATATCAACCTCACATAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0122 | -92 | 3.5 | AAACACAACTTACCTCACATTT |
|
Position: -347
Score: 5.5 Sequence: AATTGTGATTAACATCACATAA
Position: -303
Score: 5.8 Sequence: AAATGTGATGTAAATCACATTT
Position: -230
Score: 5.1 Sequence: TTTTGTGAAGTAAATCACCTAT
Locus tag: ECA0087
|
||||
| ECA0087 | -347 | 5.5 | AATTGTGATTAACATCACATAA | |
| -303 | 5.8 | AAATGTGATGTAAATCACATTT | ||
| -230 | 5.1 | TTTTGTGAAGTAAATCACCTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3599 | -206 | 4.5 | TTTTGTGATGAACGTCACGTCA |
| -162 | 5.4 | TTATGTGATTGATATCACACAA | ||
| -113 | 3.3 | TTCAGTGCCAGATTTCGCAGTA | ||
| Salmonella typhimurium LT2 | STM3685 | -207 | 4.8 | CTTTGTGATCAATATCACATCA |
| -163 | 5.4 | TTATGTGACGCAAATCACATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05054 | -203 | 5.2 | TTTTGTGATCAATATCACATCA |
| -159 | 5 | TCATGTGATCCAAATCACACAA | ||
| -110 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03942 | -208 | 4.9 | TTTTGTGATCATCATCACTAAA |
| -164 | 5.2 | TCATGTGATCCAAATCACATAA | ||
| -115 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Enterobacter sp. 638 | Ent638_0136 | -224 | 3.4 | TATTTTTTTCATACTCTCATTT |
| -205 | 4.8 | TTTTGTGATGGCGATCACCTCA | ||
| -161 | 5.1 | TTGCGTGATGCAGATCACACAA | ||
| Erwinia amylovora ATCC 49946 | EAM_3416 | -229 | 3.3 | CATTGCGAATATCTTTACACTT |
| -210 | 3.9 | CTTCGTGACTCATGTCACTAAA | ||
| -166 | 4.8 | TTAAGTGACCCGCATCACACTT | ||
| -95 | 3.2 | CGTTTTGATCGTGATCCCTCAA | ||
| -34 | 3.5 | ACATGAGATTTGCATCATTAAT | ||
| Yersinia pestis KIM | y4087 | -223 | 4.6 | AGATGTGATCTTAATCAACAAA |
| -179 | 4.5 | TTGTGTGACTTTCGTCACGAAA | ||
| Serratia proteamaculans 568 | Spro_0072 | -195 | 5.2 | AAATGTGATGTATATCACTATA |
| -151 | 4.5 | GTTGGTGATCTGCATCACAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0087 | -230 | 5.1 | TTTTGTGAAGTAAATCACCTAT |
| -186 | 4.5 | TTGTGTGATTTTTGTCACGTTG | ||
|
Position: -223
Score: 4.7 Sequence: TTTTTTGATGCGGGTCATATTT
Position: -135
Score: 4.4 Sequence: TTTTGCGACACAGCGCACATTT
Locus tag: ECA0097
|
||||
| ECA0097 | -223 | 4.7 | TTTTTTGATGCGGGTCATATTT | |
| -135 | 4.4 | TTTTGCGACACAGCGCACATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3565 | -224 | 3.9 | ATTTATGACCGAGATCTTACTT |
| -134 | 4.2 | TTTTGCGAGCGAGCGCACACTT | ||
| Salmonella typhimurium LT2 | STM3661 | -260 | 3.9 | TTATGCGAAATTCATCACAGCA |
| -133 | 4.4 | TTTTGAGAGCCAGAGCACATTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05021 | -214 | 4.1 | AATTATGACCGAGATCGTACTT |
| -122 | 4.2 | TTTTGCGAGGCGGCGCACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03929 | -234 | 4.1 | TTTTGCGAGCTGGCGCACGTTT |
| Enterobacter sp. 638 | Ent638_0156 | -231 | 3.8 | ATTTATGACCGTGATCTGATTT |
| -135 | 3.9 | TTTTGGGAGCCAGCGCACGTTT | ||
| Yersinia pestis KIM | y4057 | -220 | 4.6 | TTATGAGATCTACACCACAATT |
| Serratia proteamaculans 568 | Spro_0098 | -222 | 3.9 | TTTTATGATGGCGGTCATGCTT |
| -129 | 4.6 | TTATGAGATCTGTCGCACATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0097 | -223 | 4.7 | TTTTTTGATGCGGGTCATATTT |
| -135 | 4.4 | TTTTGCGACACAGCGCACATTT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2275 | -251 | 4.6 | ATTTATGAGATAAATCACACAA |
|
Position: -272
Score: 4.5 Sequence: AAATATGACCCGCATCAAAAAA
Locus tag: ECA0098
|
||||
| ECA0098 | -272 | 4.5 | AAATATGACCCGCATCAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylF | ||||
| Ortholog function: Xylose ABC transporter, periplasmic xylose-binding protein XylF | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3566 | -253 | 4.2 | AAGTGTGCGCTCGCTCGCAAAA |
| -163 | 3.7 | AAGTAAGATCTCGGTCATAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05022 | -254 | 4.1 | AAGTGTGCGCCGCCTCGCAAAA |
| -162 | 3.8 | AAGTACGATCTCGGTCATAATT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03930 | -234 | 3.8 | AAATACGATCGCCGTCATAATT |
| Enterobacter sp. 638 | Ent638_0155 | -264 | 3.9 | AAACGTGCGCTGGCTCCCAAAA |
| Yersinia pestis KIM | y4056 | -264 | 4.8 | AATTGTGGTGTAGATCTCATAA |
| -160 | 4.2 | AAACATGATCGTTATCATAAAA | ||
| Serratia proteamaculans 568 | Spro_0099 | -259 | 4.4 | AAATGTGCGACAGATCTCATAA |
| -166 | 3.7 | AAGCATGACCGCCATCATAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0098 | -272 | 4.5 | AAATATGACCCGCATCAAAAAA |
|
Position: -36
Score: 3.6 Sequence: AAGTATGACGGGTATATCACTT
Locus tag: ECA0118
|
||||
| ECA0118 | -36 | 3.6 | AAGTATGACGGGTATATCACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aldA | ||||
| Ortholog function: aldehyde dehydrogenase A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1415 | -112 | 4.3 | TTTTATGAAGCCCTTCACAGAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01448 | -137 | 4.7 | TTTTATGAAGCACATCACAAAA |
| -91 | 3.9 | ACATGTGATTGTTATTACTTAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01501 | -137 | 4.4 | TTTTATGAATCAGCTCACAGAA |
| Enterobacter sp. 638 | Ent638_1953 | -113 | 4.7 | TTTTATGAGATATCTCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0118 | -36 | 3.6 | AAGTATGACGGGTATATCACTT |
|
Position: -197
Score: 5.1 Sequence: AAAAGTGATTTAAGTCACATTT
Locus tag: ECA0185
|
||||
| ECA0185 | -197 | 5.1 | AAAAGTGATTTAAGTCACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: udp | ||||
| Ortholog function: Uridine phosphorylase (EC 2.4.2.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3831 | -144 | 5.2 | TTATGTGATTTGCATCACTTTT |
| -92 | 4.2 | CATGGTGATGAGTATCACGAAA | ||
| Salmonella typhimurium LT2 | STM3968 | -144 | 5.1 | TATTGTGATGAACATCACTTTT |
| -92 | 4.1 | CATAGTGATGGCTGTCACGAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00173 | -143 | 5.2 | TTATGTGATGTAAATCACTATT |
| -91 | 3.9 | CATGGTGATGAGCGTCACGAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04327 | -143 | 5.2 | TAATGTGATGTGTATCACTATT |
| -91 | 4.1 | CTTGGTGACTATCATCACAAAA | ||
| Enterobacter sp. 638 | Ent638_3962 | -143 | 4.7 | TAGTGTGATGCATGTCACTATT |
| Erwinia amylovora ATCC 49946 | EAM_0200 | -143 | 4.6 | AATTGCGACTTGTATCACCTTT |
| -90 | 4 | ATTAAGGATGTTCATCACATAA | ||
| Yersinia pestis KIM | y0444 | -149 | 5.4 | ATGTGTGATTTAAATCACAATT |
| -97 | 4 | CAAGGTGACATAAATCACGAAA | ||
| Serratia proteamaculans 568 | Spro_0244 | -143 | 5.3 | TTTTGTGACTTTAATCACAAAA |
| -125 | 3.7 | AAAAGTTATGTAGATTGCATTC | ||
| -91 | 4.1 | CATAGTGATGGTTGTCACGAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0185 | -197 | 5.1 | AAAAGTGATTTAAGTCACATTT |
| Edwardsiella tarda EIB202 | ETAE_0143 | -148 | 4.7 | TATTGTGAAAATAATCACAGTT |
| Proteus mirabilis HI4320 | PMI3532 | -145 | 5.1 | ATTTGTGATAACTATCACGTTT |
| -93 | 3.6 | ACAGGTGACGTCAATCACTAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4417 | -271 | 5.2 | TTTTGTGATTTATATCTCAAAA |
| -219 | 4 | TGAAGTGACATTTATCACTAAA | ||
|
Position: -65
Score: 4 Sequence: TATTGTATTTTTATTCAAAATA
Locus tag: ECA0191
|
||||
| ECA0191 | -65 | 4 | TATTGTATTTTTATTCAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argE | ||||
| Ortholog function: acetylornithine deacetylase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3957 | -66 | 3.7 | TAGTGTATTTTTATTCATAAAT |
| Salmonella typhimurium LT2 | STM4120 | -66 | 3.9 | TAATGTATTTTTATTCATAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03037 | -27 | 4.3 | TAATGTATTTTTATTCACAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04246 | -27 | 4 | TATTGTATTTTTATTCAAAATA |
| Enterobacter sp. 638 | Ent638_4029 | -66 | 4.2 | TAGTGTATTTTTATTCACATTT |
| Erwinia amylovora ATCC 49946 | EAM_0137 | -66 | 3.8 | TATTGTATTTTTATTCACTATT |
| Yersinia pestis KIM | y0309 | -223 | 3.6 | TATTTTTATTTATGTCAATAAA |
| Serratia proteamaculans 568 | Spro_4782 | -71 | 4.3 | TATTGTATTTTTATTCACAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0191 | -65 | 4 | TATTGTATTTTTATTCAAAATA |
| Edwardsiella tarda EIB202 | ETAE_3483 | -65 | 3.9 | TATTGTATTTTTATTCATAATT |
| Proteus mirabilis HI4320 | PMI3236 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4745 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
|
Position: -159
Score: 3.5 Sequence: TATTTTGAATAAAAATACAATA
Locus tag: ECA0192
|
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| ECA0192 | -159 | 3.5 | TATTTTGAATAAAAATACAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argC | ||||
| Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | ||||
| Salmonella typhimurium LT2 | STM4121 | -44 | 3.5 | AATTATGAATAAAAATACATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_03036 | -110 | 4 | ATTTGTGAATAAAAATACATTA |
| Enterobacter sp. 638 | Ent638_4028 | -44 | 3.8 | AAATGTGAATAAAAATACACTA |
| Yersinia pestis KIM | y0310 | -43 | 3.7 | TTTATTGACATAAATAAAAATA |
| Serratia proteamaculans 568 | Spro_4781 | -167 | 4 | TATTGTGAATAAAAATACAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0192 | -159 | 3.5 | TATTTTGAATAAAAATACAATA |
| Edwardsiella tarda EIB202 | ETAE_3482 | -160 | 3.4 | AATTATGAATAAAAATACAATA |
| Proteus mirabilis HI4320 | PMI3237 | -57 | 3.6 | TTTTTTGAATAAAAATACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4744 | -59 | 3.6 | TTTTTTGAATAAAAATACATTA |
|
Position: -197
Score: 3.3 Sequence: AAACGTGATTTAAGGCCTGAAA
Locus tag: ECA0238
|
||||
| ECA0238 | -197 | 3.3 | AAACGTGATTTAAGGCCTGAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hupA | ||||
| Ortholog function: DNA-binding protein HU-alpha (HU-2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4000 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_02986 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04382 | -179 | 3.4 | AAACGTGATTTACCGCCTGAAT |
| Enterobacter sp. 638 | Ent638_0213 | -179 | 3.5 | AAACGTGATTTAACGCCTGTTT |
| Yersinia pestis KIM | y0499 | -181 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Serratia proteamaculans 568 | Spro_0290 | -181 | 3.4 | AAACGTGATTTAACGCCTCATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0238 | -197 | 3.3 | AAACGTGATTTAAGGCCTGAAA |
| Edwardsiella tarda EIB202 | ETAE_0183 | -182 | 3.3 | AAACGTGATTTAACACCTGATT |
| Proteus mirabilis HI4320 | PMI2771 | -183 | 3.7 | AAACGTGATTTAGTGCTTGAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0492 | -179 | 3.4 | AAACGTGATTTAATGCTTTAAA |
|
Position: -37
Score: 5.1 Sequence: TAGTGTGATCTAAATCACTTTT
Locus tag: ECA0276
|
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| ECA0276 | -37 | 5.1 | TAGTGTGATCTAAATCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aaeR | ||||
| Ortholog function: LysR-family transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3243 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Salmonella typhimurium LT2 | STM3367 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04651 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03652 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Enterobacter sp. 638 | Ent638_3680 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Erwinia amylovora ATCC 49946 | EAM_3128 | -37 | 5.3 | AAATGTGATCTAAATCACTTTT |
| Yersinia pestis KIM | y0180 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Serratia proteamaculans 568 | Spro_4393 | -37 | 4.9 | ATCTGTGATCTAAATCACTTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0276 | -37 | 5.1 | TAGTGTGATCTAAATCACTTTT |
| Edwardsiella tarda EIB202 | ETAE_3129 | -131 | 4.5 | ATCTGTGACGCAAATCACTTTT |
|
Position: -72
Score: 3.7 Sequence: ATGTGTGATGTAGATTAGTGTT
Locus tag: ECA0316
|
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| ECA0316 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: elbB | ||||
| Ortholog function: sigma cross-reacting protein 27A (SCRP-27A) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3209 | -91 | 3.7 | ATTTGTTACATGAATCAGTTAA |
| -69 | 4 | ATGTGTGATGCGTACCATTTTT | ||
| Salmonella typhimurium LT2 | STM3327 | -91 | 3.9 | ATTTGTTACATGAATCATTTAA |
| -69 | 3.6 | ATGTGTGAAGCGTAGCATTTTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04612 | -92 | 3.7 | TTTTGTTACATGAATCAGTTAA |
| -70 | 3.6 | ATGTGTGAAGCGCAGCATTTTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03618 | -93 | 3.6 | ATTTGTTACATGAATCAGTAAA |
| -71 | 3.8 | ATATGTGAAGCATAGCGAGTTA | ||
| Serratia proteamaculans 568 | Spro_4341 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0316 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT |
| Proteus mirabilis HI4320 | PMI3679 | -174 | 4.1 | TTTTTTGATTATCATTACATAG |
|
Position: -144
Score: 3.9 Sequence: CGGTGTGATCCTTGCCACACTT
Locus tag: ECA0441
|
||||
| ECA0441 | -144 | 3.9 | CGGTGTGATCCTTGCCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaS | ||||
| Ortholog function: L-rhamnose operon regulatory protein RhaS | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3905 | -182 | 4.5 | GAACGTGATGATGTTCACAATT |
| -147 | 4.5 | TGATGTGATGCTCACCGCATTT | ||
| Salmonella typhimurium LT2 | STM4048 | -182 | 4.3 | GAACGTGATAGCGTTCACAGTT |
| -147 | 4 | CGGTGTGATGTCGTCCGCATTT | ||
| -62 | 3.8 | TAAGGTGAGGCCGATAACCCTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03099 | -194 | 4.5 | GAACGTGATAGCGTTCACAATT |
| -34 | 4.3 | ATTTCTGACATGTTTCTCATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04214 | -204 | 3.8 | GACCGTGAGGGACATCACAGTT |
| Enterobacter sp. 638 | Ent638_4066 | -194 | 4.2 | GAACGTGAGGGAGTTCACAGTT |
| Yersinia pestis KIM | y0590 | -214 | 3.9 | GAAAGTGAAACAGCTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0441 | -144 | 3.9 | CGGTGTGATCCTTGCCACACTT |
|
Position: -193
Score: 3.6 Sequence: TTTTGTGATCCTGCCTATATCA
Locus tag: ECA0450
|
||||
| ECA0450 | -193 | 3.6 | TTTTGTGATCCTGCCTATATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaT | ||||
| Ortholog function: L-rhamnose-proton symport | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3907 | -145 | 4.1 | AGATGTGAAGCAAATCACCCAC |
| Salmonella typhimurium LT2 | STM4050 | -293 | 3.6 | TTATGTGACCTCACGCAGCGTT |
| -149 | 3.9 | AAACGTGAAGTTAATCACTTCA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03094 | -148 | 4.1 | ATATGTGAGCCAAATCACCCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04216 | -149 | 4.7 | TTTTGTGATGTAGAACAACTAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0450 | -193 | 3.6 | TTTTGTGATCCTGCCTATATCA |
|
Position: -177
Score: 4.3 Sequence: TGTTTTGATTTGTTTCGCCTTT
Locus tag: ECA0469
|
||||
| ECA0469 | -177 | 4.3 | TGTTTTGATTTGTTTCGCCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: osmY | ||||
| Ortholog function: Osmotically inducible protein OsmY | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0469 | -177 | 4.3 | TGTTTTGATTTGTTTCGCCTTT |
|
Position: -182
Score: 4.9 Sequence: AATTGTGACGAAGATCACTTTT
Locus tag: ECA0473
|
||||
| ECA0473 | -182 | 4.9 | AATTGTGACGAAGATCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC2 | ||||
| Ortholog function: Na+ dependent nucleoside transporter | ||||
| Yersinia pestis KIM | y3744 | -154 | 3.8 | CTTTGTCAATAACCTCACATAT |
| -115 | 5.5 | TAATGTGATTATGATCACATTT | ||
| Serratia proteamaculans 568 | Spro_0659 | -181 | 3.9 | AACCGTGACGCATGTCACGTAC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0473 | -182 | 4.9 | AATTGTGACGAAGATCACTTTT |
| Edwardsiella tarda EIB202 | ETAE_0482 | -232 | 4.9 | TGATGTGATATGCATCACTTTT |
| Proteus mirabilis HI4320 | PMI2418 | -180 | 5.2 | TAGTGTGATTTAGATCTCATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0519 | -178 | 5.5 | TTGTGTGATTCACATCACATTT |
|
Position: -272
Score: 4 Sequence: ACTCGTGACTACAATCACAGTT
Locus tag: ECA0621
|
||||
| ECA0621 | -272 | 4 | ACTCGTGACTACAATCACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aspA | ||||
| Ortholog function: aspartate ammonia-lyase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4139 | -206 | 4.5 | AGCGGTGATCTATTTCACAAAT |
| -156 | 4.2 | TAAAGTGATCCAGATTACGGTA | ||
| Salmonella typhimurium LT2 | STM4326 | -209 | 4.2 | AGCGGTGACCTATTTCACAAAA |
| -159 | 4.2 | TTAAGTGATCCAGATTACGGTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03696 | -54 | 4.2 | AGCGGTGACCTATTTCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04529 | -204 | 3.9 | AGCGGTGACCCATTTCACAGAT |
| -154 | 3.8 | ATAAGTGATCAAGCTTACTGAT | ||
| Enterobacter sp. 638 | Ent638_0326 | -205 | 4.1 | AGCGGTGATTCATTTCACAGAT |
| Erwinia amylovora ATCC 49946 | EAM_0416 | -228 | 4.2 | CAATGTGACCTGGAACAGATAT |
| Yersinia pestis KIM | y0606 | -224 | 4.6 | AAGTGTGAGAGCAATCACAGAT |
| Serratia proteamaculans 568 | Spro_0406 | -205 | 4.7 | AAACGTGAATGAGATCACAGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0621 | -272 | 4 | ACTCGTGACTACAATCACAGTT |
| Edwardsiella tarda EIB202 | ETAE_0311 | -197 | 4.4 | ATCTGTGAGTATTATCACAGAT |
| Proteus mirabilis HI4320 | PMI2546 | -206 | 4.1 | ATCCATGAGATAGATCACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4137 | -274 | 3.8 | AGATATAATTGGGGTCACAGTT |
| -211 | 5.6 | AATTGTGATAAATATCACATAT | ||
|
Position: -245
Score: 3.7 Sequence: AACTGTGATTGTAGTCACGAGT
Position: -185
Score: 3.6 Sequence: AAATGTGCAAAGGCGCACCCAT
Locus tag: ECA0623
|
||||
| ECA0623 | -245 | 3.7 | AACTGTGATTGTAGTCACGAGT | |
| -185 | 3.6 | AAATGTGCAAAGGCGCACCCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fxsA | ||||
| Ortholog function: suppressor of F plamsid exlusion of phage T7 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4140 | -202 | 4.1 | TACCGTAATCTGGATCACTTTA |
| -152 | 4.3 | ATTTGTGAAATAGATCACCGCT | ||
| Salmonella typhimurium LT2 | STM4327 | -203 | 4.1 | TACCGTAATCTGGATCACTTAA |
| -153 | 4.1 | TTTTGTGAAATAGGTCACCGCT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03695 | -156 | 4.1 | TTTTGTGAAATAGGTCACCGCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04530 | -140 | 3.7 | ATCTGTGAAATGGGTCACCGCT |
| Enterobacter sp. 638 | Ent638_0327 | -151 | 3.8 | ATCTGTGAAATGAATCACCGCT |
| Erwinia amylovora ATCC 49946 | EAM_0417 | -161 | 3.9 | ATATCTGTTCCAGGTCACATTG |
| Yersinia pestis KIM | y0607 | -245 | 4.8 | ATCTGTGATTGCTCTCACACTT |
| Serratia proteamaculans 568 | Spro_0407 | -117 | 4.9 | TTCTGTGATCTCATTCACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0623 | -245 | 3.7 | AACTGTGATTGTAGTCACGAGT |
| -185 | 3.6 | AAATGTGCAAAGGCGCACCCAT | ||
| Edwardsiella tarda EIB202 | ETAE_0312 | -189 | 4.6 | ATCTGTGATAATACTCACAGAT |
| Proteus mirabilis HI4320 | PMI2545 | -188 | 4.7 | TTTTGTGATCTATCTCATGGAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4136 | -188 | 5.6 | ATATGTGATATTTATCACAATT |
|
Position: -208
Score: 4.8 Sequence: TTTTGTGATATCACTCAACTTT
Locus tag: ECA0644
|
||||
| ECA0644 | -208 | 4.8 | TTTTGTGATATCACTCAACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuT | ||||
| Ortholog function: Hexuronate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3093 | -274 | 4.2 | TTTCGTGAGTTAGATCAATAAA |
| -152 | 5.1 | ATTTGTGATGGCTCTCACCTTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04495 | -250 | 5.2 | ATTTGTGATGTCACTCACCTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03521 | -263 | 4.4 | TTTTGTGACAGCTCTCAACTTT |
| Enterobacter sp. 638 | Ent638_3547 | -261 | 4.2 | TTTCGTGAGTTAGATCAATAAA |
| -139 | 5.2 | TTTTGTGATGTCACTCACCTTT | ||
| Serratia proteamaculans 568 | Spro_4322 | -180 | 4.8 | TTTTGTGATATCACTCAACTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0644 | -208 | 4.8 | TTTTGTGATATCACTCAACTTT |
|
Position: -229
Score: 4.1 Sequence: AAAGTTGAGTGATATCACAAAA
Locus tag: ECA0645
|
||||
| ECA0645 | -229 | 4.1 | AAAGTTGAGTGATATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3092 | -232 | 4.5 | AAAGGTGAGAGCCATCACAAAT |
| -110 | 4.4 | TTTATTGATCTAACTCACGAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04494 | -169 | 4.6 | AAAGGTGAGTGACATCACAAAT |
| -47 | 4.3 | TTTATTGATCCAACTCACGAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03520 | -251 | 3.8 | AAAGTTGAGAGCTGTCACAAAA |
| -129 | 4.4 | TTTATTGATCTAACTCACGAAA | ||
| Enterobacter sp. 638 | Ent638_3546 | -231 | 4.6 | AAAGGTGAGTGACATCACAAAA |
| -109 | 4.4 | TTTATTGATCTAACTCACGAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0645 | -229 | 4.1 | AAAGTTGAGTGATATCACAAAA |
| -109 | 3.8 | TTTTGCGATCATGACCTCACAA | ||
| -86 | 3.7 | TCCTGTGAGATATTGCGCATAA | ||
|
Position: -96
Score: 4.4 Sequence: CAATTTGAGCCGGTTCACACTT
Locus tag: ECA0718
|
||||
| ECA0718 | -96 | 4.4 | CAATTTGAGCCGGTTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deaD | ||||
| Ortholog function: ATP-independent RNA helicase | ||||
| Salmonella typhimurium LT2 | STM3280.S | -154 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04559 | -103 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -48 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03570 | -154 | 3.8 | TTTTTTGCTTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACAT | ||
| Enterobacter sp. 638 | Ent638_3599 | -154 | 4.1 | TCTTATGATTGCCATCACCTTA |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Erwinia amylovora ATCC 49946 | EAM_3065 | -99 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Yersinia pestis KIM | y0696 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Serratia proteamaculans 568 | Spro_0495 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0718 | -96 | 4.4 | CAATTTGAGCCGGTTCACACTT |
| Edwardsiella tarda EIB202 | ETAE_0411 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Proteus mirabilis HI4320 | PMI3424 | -80 | 5 | TAATTTGAGCCAGTTCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4523 | -95 | 5 | TAATTTGAGCCAGTTCACATTT |
|
Position: -282
Score: 4.4 Sequence: AAGTGTGAATGAATGCACAAAA
Locus tag: ECA0727
|
||||
| ECA0727 | -282 | 4.4 | AAGTGTGAATGAATGCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC | ||||
| Ortholog function: 2-deoxyribose-5-phosphate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4381 | -149 | 4.6 | TTATTTGAACCAGATCGCATTA |
| -96 | 4.5 | AATTGTGATGTGTATCGAAGTG | ||
| Salmonella typhimurium LT2 | STM4567 | -133 | 4.9 | TAATTTGATTCAGATCTCATTA |
| -80 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03410 | -134 | 4.2 | TTATTTGAAGTGGATCTCGTTA |
| -81 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04837 | -158 | 5.2 | ATTTGTGATTTTAATCACGTTA |
| -105 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Enterobacter sp. 638 | Ent638_0541 | -151 | 4.6 | AAATTTGAAGTGGATCTCATTA |
| -98 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0615 | -233 | 4.6 | TGATGTGATAATTCTAACATTA |
| Yersinia pestis KIM | y3743 | -169 | 3.7 | TGCGGTGAGATGGATCTCAATT |
| Serratia proteamaculans 568 | Spro_0660 | -262 | 4.6 | ATTTGTGAACGATATCGCGTTA |
| -240 | 5.5 | TTTTGTGATGGTCTTCACATAT | ||
| -188 | 3.8 | TAGTGTGACTGTGAACGCGAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0727 | -282 | 4.4 | AAGTGTGAATGAATGCACAAAA |
| Proteus mirabilis HI4320 | PMI2416 | -267 | 4.4 | ATATGTGAGTTACTTCGCAACT |
| -135 | 5.6 | TTTTGTGATTCTGATCACAATT | ||
| -83 | 4.5 | TATTGTGACAGAAAGCACATCT | ||
|
Position: -222
Score: 4.7 Sequence: AATTGTGTGCGATCTCACATAT
Locus tag: ECA0769
|
||||
| ECA0769 | -222 | 4.7 | AATTGTGTGCGATCTCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhjE | ||||
| Ortholog function: Inner membrane metabolite transport protein YhjE | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3523 | -155 | 4.5 | TTATGTGAAGCATTTCATAGAA |
| Salmonella typhimurium LT2 | STM3609 | -154 | 4.2 | TTATGTGAAGCATTTCATAGAC |
| Citrobacter koseri ATCC BAA-895 | CKO_04963 | -155 | 4 | TTGTGTGAAGCATTTCATAGAC |
| -94 | 3.7 | TTATTTGAGCGAAATCCCGCTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03874 | -154 | 4.3 | TTGTGTGAAGCATTTCATAGAA |
| Enterobacter sp. 638 | Ent638_3920 | -155 | 4.2 | AACTGTGAAGCATTTCATAGAA |
| Erwinia amylovora ATCC 49946 | EAM_3376 | -134 | 3.6 | AAATATGCCGTATTGAACATTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0769 | -222 | 4.7 | AATTGTGTGCGATCTCACATAT |
|
Position: -154
Score: 3.7 Sequence: TAGTATGATTCAATAAACACAA
Locus tag: ECA1162
|
||||
| ECA1162 | -154 | 3.7 | TAGTATGATTCAATAAACACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tesB | ||||
| Ortholog function: Acyl-CoA thioesterase II (EC 3.1.2.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0452 | -138 | 3.9 | AAGTGTGGCACACATCACGCAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02706 | -135 | 3.9 | AAGTGTGGCATATCTCACTTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00415 | -139 | 3.8 | AAGTGTGGCACAGATCTCAGAT |
| Enterobacter sp. 638 | Ent638_0920 | -131 | 4 | AAGTGTGGCACATATCACTTAT |
| Yersinia pestis KIM | y1043 | -153 | 3.6 | TAGCGTGCTAATTATAGCATAA |
| Serratia proteamaculans 568 | Spro_1111 | -54 | 3.6 | TGCCGTGATATTCCGCACACTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1162 | -154 | 3.7 | TAGTATGATTCAATAAACACAA |
|
Position: -57
Score: 3.7 Sequence: TATTTTTCTACAGCTAACAAAA
Locus tag: ECA1187
|
||||
| ECA1187 | -57 | 3.7 | TATTTTTCTACAGCTAACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cstA2 | ||||
| Ortholog function: Carbon starvation protein A paralog | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4354 | -231 | 5.7 | ATATGTGATATGAATCACATAT |
| Salmonella typhimurium LT2 | STM4532 | -229 | 5.4 | TATCGTGATCTCAATCACATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03443 | -228 | 5.2 | ATTAGTGATCTCAATCACATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04776 | -231 | 5.2 | TATTGTGAGCTTAATCACACAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1187 | -57 | 3.7 | TATTTTTCTACAGCTAACAAAA |
| Proteus mirabilis HI4320 | PMI0142 | -279 | 3.6 | ATTTTTTATGTAATTAATAGTT |
| -234 | 5.2 | ATTTGTTATCTCGATCACAAAA | ||
|
Position: -138
Score: 3.7 Sequence: TTCTGCAACGCAGTTCACAGTA
Locus tag: ECA1292
|
||||
| ECA1292 | -138 | 3.7 | TTCTGCAACGCAGTTCACAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yffB | ||||
| Ortholog function: FIG138056: a glutathione-dependent thiol reductase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2471 | -246 | 3.8 | GTATGTGATACACAGCAACATT |
| Salmonella typhimurium LT2 | STM2482 | -282 | 4 | TTATGTGACTTACTGCAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_00317 | -276 | 4 | TTATGTGACTTACTGCAATATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02804 | -218 | 4 | TAATGTGACGTAGAGCAACCTC |
| -179 | 4 | TAATGTTAAAGCCCTCACATCA | ||
| Enterobacter sp. 638 | Ent638_2966 | -254 | 4 | TTATGTGACCAATAGCAATATT |
| -77 | 3.6 | ATATGTTATGTTTTGCCAAATA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1292 | -138 | 3.7 | TTCTGCAACGCAGTTCACAGTA |
|
Position: -113
Score: 3.9 Sequence: TTTAGCGACTTTTATCACTTTT
Locus tag: ECA1294
|
||||
| ECA1294 | -113 | 3.9 | TTTAGCGACTTTTATCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cspE | ||||
| Ortholog function: cold shock protein E | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0623 | -114 | 4 | TAACGCGACTTTTATCACTTTT |
| Salmonella typhimurium LT2 | STM0629 | -114 | 4.3 | TAACGCGATATTTATCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02534 | -21 | 4.3 | TAACGCGATATTTATCACTTTT |
| Enterobacter sp. 638 | Ent638_1159 | -114 | 3.8 | TAACGCGACTTTTGTCACTTTT |
| Erwinia amylovora ATCC 49946 | EAM_1116 | -113 | 3.6 | AAAAACGATATTTATCACTTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1294 | -113 | 3.9 | TTTAGCGACTTTTATCACTTTT |
|
Position: -180
Score: 5 Sequence: TTATGTGATAAAAATCACCAAA
Locus tag: ECA1326
|
||||
| ECA1326 | -180 | 5 | TTATGTGATAAAAATCACCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagB | ||||
| Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0678 | -212 | 4.3 | AAATTTAATTCGTATCGCAAAT |
| -178 | 4.6 | TTTTGTGAGTTTTGTCACCAAA | ||
| Salmonella typhimurium LT2 | STM0684 | -205 | 3.7 | AAAATTAATTCGCCTCGCAAAT |
| -171 | 4.7 | TTTTGTGATTATAATCACTAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02486 | -218 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -184 | 5.2 | TTTTGTGATTTGAATCACCAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00699 | -217 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -183 | 5 | TTTTGTGATAATTATCACCAAA | ||
| Enterobacter sp. 638 | Ent638_1193 | -218 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -184 | 4.6 | TTTTGTGAGTTTTGTCACCAAA | ||
| Erwinia amylovora ATCC 49946 | EAM_1147 | -195 | 4.9 | ATATGTGATTAAAGTCACCTTA |
| Yersinia pestis KIM | y1202 | -214 | 5.1 | TTTTGTGATAAATATCACCAAA |
| Serratia proteamaculans 568 | Spro_1227 | -194 | 5.3 | TTTTGTGATTTACATCACCAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1326 | -180 | 5 | TTATGTGATAAAAATCACCAAA |
| Edwardsiella tarda EIB202 | ETAE_2617 | -190 | 5 | ATTTGTGATAACTATCACCAAT |
| Proteus mirabilis HI4320 | PMI0454 | -217 | 4.9 | ATTTGTGATTAAAGTCACCTAT |
|
Position: -202
Score: 5 Sequence: TTTGGTGATTTTTATCACATAA
Locus tag: ECA1327
|
||||
| ECA1327 | -202 | 5 | TTTGGTGATTTTTATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagE | ||||
| Ortholog function: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) | ||||
| Enterobacter sp. 638 | Ent638_1194 | -162 | 4.4 | TTTGGTGACAAAACTCACAAAA |
| -128 | 3.6 | ATTTGCGATACGAATTAATTTT | ||
| Yersinia pestis KIM | y1203 | -206 | 4.9 | TTTGGTGATATTTATCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1327 | -202 | 5 | TTTGGTGATTTTTATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_2616 | -157 | 4.8 | ATTGGTGATAGTTATCACAAAT |
| Proteus mirabilis HI4320 | PMI0455 | -150 | 4.6 | ATAGGTGACTTTAATCACAAAT |
|
Position: -265
Score: 4.7 Sequence: ATTCGTGATCTAAATCACTGTT
Locus tag: ECA1357
|
||||
| ECA1357 | -265 | 4.7 | ATTCGTGATCTAAATCACTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit | ||||
| Enterobacter sp. 638 | Ent638_1222 | -295 | 4.2 | TATCGTGACTGTGATCACTGTT |
| Erwinia amylovora ATCC 49946 | EAM_1168 | -249 | 4.4 | AAGTGTGATTTTTGTCACTGTT |
| -190 | 3.6 | TAATGAGATTGTGATCCACTTA | ||
| Yersinia pestis KIM | y3071 | -254 | 4.5 | AATCGTGATCCTAATCACTGTT |
| Serratia proteamaculans 568 | Spro_1263 | -253 | 4.3 | ATCCGTGATCTAAATCACTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1357 | -265 | 4.7 | ATTCGTGATCTAAATCACTGTT |
| Edwardsiella tarda EIB202 | ETAE_2588 | -261 | 3.7 | ATGCGTGACCGTTGTCACTGTT |
| Proteus mirabilis HI4320 | PMI0565 | -264 | 4.3 | AAAAGTGATCCCTCTCACTGTT |
|
Position: -72
Score: 3.7 Sequence: ATTCTCGCTGTAGATCACCTTT
Locus tag: ECA1389
|
||||
| ECA1389 | -72 | 3.7 | ATTCTCGCTGTAGATCACCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galE2 | ||||
| Ortholog function: UDP-galactose-4-epimerase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0759 | -78 | 3.8 | TAATTTATTCCATGTCACACTT |
| Salmonella typhimurium LT2 | STM0776 | -78 | 3.7 | TAATTTATTACATGTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02376 | -36 | 3.7 | TAATATATTCCATGTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00773 | -78 | 3.7 | TAACTTGTGCTATGTCACACTT |
| -44 | 4.1 | ATATGCTATCTTCCTCACAAAC | ||
| Yersinia pestis KIM | y3043 | -163 | 3.7 | TTATTTGTCTATGCTCACAGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1389 | -72 | 3.7 | ATTCTCGCTGTAGATCACCTTT |
| Edwardsiella tarda EIB202 | ETAE_2564 | -195 | 3.7 | TAGTGTAAGCGATACCACAAAC |
|
Position: -149
Score: 4.1 Sequence: CTTTGTGATCGCTTCCACTTTA
Position: -92
Score: 4.5 Sequence: ATATGTTATGGAAAACACAAAT
Locus tag: ECA1490
|
||||
| ECA1490 | -149 | 4.1 | CTTTGTGATCGCTTCCACTTTA | |
| -92 | 4.5 | ATATGTTATGGAAAACACAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lacZ | ||||
| Ortholog function: beta-D-galactosidase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0344 | -110 | 4.7 | TAATGTGAGTTAGCTCACTCAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02825 | -110 | 4.4 | TTGTGTGAGTCAGTTCACTCAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_pKPN3p05871 | -109 | 4.6 | TAATGTGAGTCAGCTCACTCAT |
| Enterobacter sp. 638 | Ent638_0928 | -100 | 4.4 | TTTTGTGATCGACTTCGCTTTG |
| Erwinia amylovora ATCC 49946 | EAM_0926 | -94 | 3.8 | TGTTGCGATAGCCATCACATCC |
| Yersinia pestis KIM | y1817 | -168 | 4 | ACATGTGCGACAGATCACATTC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1490 | -149 | 4.1 | CTTTGTGATCGCTTCCACTTTA |
| -92 | 4.5 | ATATGTTATGGAAAACACAAAT | ||
|
Position: -296
Score: 3.5 Sequence: TATTGCGAGCGAGATCTTTTAT
Position: -267
Score: 3.2 Sequence: AAATAGGACAAAGATAAAAATT
Position: -247
Score: 3.5 Sequence: TTAATAGATTTAGATCAAGAAA
Locus tag: ECA1533
|
||||
| ECA1533 | -296 | 3.5 | TATTGCGAGCGAGATCTTTTAT | |
| -267 | 3.2 | AAATAGGACAAAGATAAAAATT | ||
| -247 | 3.5 | TTAATAGATTTAGATCAAGAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dcuB | ||||
| Ortholog function: C4-dicarboxylate transporter DcuB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4123 | -53 | 3.5 | GACTGTGATCTATTCAGCAAAA |
| Salmonella typhimurium LT2 | STM4301 | -53 | 3.5 | GGCTGTGATCCATTTATCAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03748 | -52 | 3.9 | GACTGTGATCTATTTATCAAAA |
| Enterobacter sp. 638 | Ent638_2479 | -81 | 3.3 | AAATCTGATCTGGCTCCCAGCC |
| Serratia proteamaculans 568 | Spro_3863 | -77 | 3.6 | GTTTGTGATCGCTATCCCTCAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1533 | -296 | 3.5 | TATTGCGAGCGAGATCTTTTAT |
| -247 | 3.5 | TTAATAGATTTAGATCAAGAAA | ||
| Edwardsiella tarda EIB202 | ETAE_2844 | -194 | 3.6 | ATACTTTATTCAGATCAATTTT |
| Proteus mirabilis HI4320 | PMI0389 | -138 | 3.3 | AACTATAACAACGATCAAAAAA |
|
Position: -169
Score: 4.3 Sequence: AAACGTGATCGGGATCGCATCG
Locus tag: ECA1683
|
||||
| ECA1683 | -169 | 4.3 | AAACGTGATCGGGATCGCATCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: trg | ||||
| Ortholog function: Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1683 | -169 | 4.3 | AAACGTGATCGGGATCGCATCG |
|
Position: -200
Score: 3.9 Sequence: TCTTATGACACAAATCACATCA
Locus tag: ECA1751
|
||||
| ECA1751 | -200 | 3.9 | TCTTATGACACAAATCACATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompA | ||||
| Ortholog function: outer membrane protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0957 | -188 | 4 | ATGCCTGACGGAGTTCACACTT |
| Salmonella typhimurium LT2 | STM1070 | -188 | 4.3 | ATGTCTGACGGAGTTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02111 | -164 | 4 | ATGCCTGACGGAGTTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00986 | -185 | 3.9 | ATGCCTGACAGAGTTCACACTT |
| Enterobacter sp. 638 | Ent638_1469 | -189 | 4 | ATGCCTGACGGAGTTCACACTT |
| Serratia proteamaculans 568 | Spro_1754 | -195 | 3.8 | TTTTTAGAGCTTTATCACATCA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1751 | -200 | 3.9 | TCTTATGACACAAATCACATCA |
| Edwardsiella tarda EIB202 | ETAE_1267 | -196 | 3.7 | TTTGGTGAGCATAATCACATCG |
|
Position: -162
Score: 4.6 Sequence: AAACGTGATAGCAATCAAACAT
Locus tag: ECA1805
|
||||
| ECA1805 | -162 | 4.6 | AAACGTGATAGCAATCAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptsG | ||||
| Ortholog function: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1101 | -154 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Salmonella typhimurium LT2 | STM1203 | -155 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01957 | -229 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01099 | -155 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Enterobacter sp. 638 | Ent638_1616 | -155 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Erwinia amylovora ATCC 49946 | EAM_1466 | -162 | 4.6 | AAACGTGATAGCCATCAAACAA |
| Yersinia pestis KIM | y1767 | -166 | 4.4 | AAACGTGACGGCAATCAAACAT |
| Serratia proteamaculans 568 | Spro_1914 | -164 | 4.4 | AAACGTGACTGTCATCAAACAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1805 | -162 | 4.6 | AAACGTGATAGCAATCAAACAT |
| Proteus mirabilis HI4320 | PMI2292 | -156 | 4.5 | AAACGTGACAGCTATCATATAT |
|
Position: -153
Score: 4 Sequence: TAAATTGATATATATCAATTTT
Locus tag: ECA1815
|
||||
| ECA1815 | -153 | 4 | TAAATTGATATATATCAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndh | ||||
| Ortholog function: NADH dehydrogenase (EC 1.6.99.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1109 | -154 | 3.9 | AAACTTGATTAACATCAATTTT |
| Salmonella typhimurium LT2 | STM1211 | -154 | 4.1 | AAACTTGATGCACATCAATTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01106 | -152 | 4.1 | AAACTTGATGCACATCAATTTT |
| Enterobacter sp. 638 | Ent638_1624 | -153 | 4 | AAACTTGATTCATATCAATTTT |
| Erwinia amylovora ATCC 49946 | EAM_1473 | -55 | 3.7 | TAAGGTTATTTTATTAACCTTT |
| Yersinia pestis KIM | y1777 | -152 | 3.8 | AAAGTTGATATATATCAATTTT |
| Serratia proteamaculans 568 | Spro_1926 | -153 | 4.3 | AAGTTTGATGTACATCAATTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1815 | -153 | 4 | TAAATTGATATATATCAATTTT |
| Edwardsiella tarda EIB202 | ETAE_2070 | -166 | 4.3 | TTATTTGATTTGAATCAATTTT |
| Proteus mirabilis HI4320 | PMI0875 | -157 | 4.6 | TTTTTTGATATAAATCAACTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2821 | -154 | 3.8 | GAATTTGATGTTGTTCAATTTT |
|
Position: -171
Score: 3.6 Sequence: TAATGTGCGCCATTTCGTTTAT
Locus tag: ECA1851
|
||||
| ECA1851 | -171 | 3.6 | TAATGTGCGCCATTTCGTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroH | ||||
| Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1704 | -106 | 4.3 | AGGTGTGACACACCTCGCACTT |
| -64 | 4 | TATCGTGATGCGCATCACTTCC | ||
| Salmonella typhimurium LT2 | STM1347 | -106 | 4.3 | AGGTGTGACACGCCTCGCACTT |
| -64 | 4 | TATCGTGATGCCCATCACTTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01728 | -115 | 4.3 | AGGTGTGAAACGCCTCGCATTT |
| -64 | 4.3 | TATTGTGATGCCCATCACTTCC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02162 | -63 | 4 | TATCGTGATGCGCATCACTTCC |
| Enterobacter sp. 638 | Ent638_1743 | -126 | 3.6 | AGTTATGATCGCTTTCACTCTC |
| -62 | 3.6 | TAAGGTGATGCCCATCACTTCC | ||
| Yersinia pestis KIM | y1928 | -64 | 4.3 | TATTGTGATCGCCATCACTTCC |
| Serratia proteamaculans 568 | Spro_2172 | -135 | 3.9 | TTTTGTGCTTTTTTTAGCGATT |
| -64 | 4.3 | TATTGTGATCGCCATCACTTCC | ||
| Edwardsiella tarda EIB202 | ETAE_1792 | -63 | 4 | TATCGTGATCCCCATCACTTCC |
| Proteus mirabilis HI4320 | PMI1423 | -55 | 3.9 | TATTGTGATCTTAATCACTGGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2630 | -62 | 3.8 | TATTGTAATTTCCATTATCTAT |
|
Position: -56
Score: 3.6 Sequence: TTGTGTAATACTTGTAACGCTA
Locus tag: ECA1866
|
||||
| ECA1866 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lpp | ||||
| Ortholog function: major outer membrane lipoprotein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1677 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Salmonella typhimurium LT2 | STM1377 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_01710 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02134 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Enterobacter sp. 638 | Ent638_1767 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Erwinia amylovora ATCC 49946 | EAM_1656 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Serratia proteamaculans 568 | Spro_2186 | -55 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1866 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Edwardsiella tarda EIB202 | ETAE_1852 | -55 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Proteus mirabilis HI4320 | PMI1409 | -200 | 4.4 | TTTTGTGAAATAACACGCATTT |
|
Position: -21
Score: 4.8 Sequence: AAAAGTGAACGGGATCACAAAA
Locus tag: ECA1966
|
||||
| ECA1966 | -21 | 4.8 | AAAAGTGAACGGGATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_02295 | ||||
| Ortholog function: hypothetical protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02295 | -218 | 3.9 | TTTTGTTATCTCATTGAAAATT |
| -104 | 4.1 | TTTTGTGCAAGTTTTCTCATTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02295 | -218 | 3.9 | TTTTGTTATCTCATTGAAAATT |
| -104 | 4.1 | TTTTGTGCAAGTTTTCTCATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00854 | -103 | 3.9 | TGAAATGAGCGAGATCGCATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00854 | -103 | 3.9 | TGAAATGAGCGAGATCGCATAT |
| Enterobacter sp. 638 | Ent638_1314 | -122 | 4.1 | TTTTGTGCAAGCTTTCTCATAA |
| Enterobacter sp. 638 | Ent638_1314 | -122 | 4.1 | TTTTGTGCAAGCTTTCTCATAA |
| Yersinia pestis KIM | y3231 | -299 | 5.4 | TAATGTGACTTTGTTCACATTA |
| -122 | 3.8 | TTCTTTGAAAGAATTCTCATAA | ||
| -21 | 4.9 | TAATTTGAGGGAGATCACAAAA | ||
| Yersinia pestis KIM | y3231 | -299 | 5.4 | TAATGTGACTTTGTTCACATTA |
| -122 | 3.8 | TTCTTTGAAAGAATTCTCATAA | ||
| -21 | 4.9 | TAATTTGAGGGAGATCACAAAA | ||
| Serratia proteamaculans 568 | Spro_3600 | -130 | 3.7 | AAACGTGGTTTTTTGCAAAAAT |
| -21 | 4.6 | AAATTTGAAGGAGATCACAGAA | ||
| Serratia proteamaculans 568 | Spro_3600 | -130 | 3.7 | AAACGTGGTTTTTTGCAAAAAT |
| -21 | 4.6 | AAATTTGAAGGAGATCACAGAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -21 | 4.8 | AAAAGTGAACGGGATCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -21 | 4.8 | AAAAGTGAACGGGATCACAAAA |
|
Position: -255
Score: 3.9 Sequence: CATGGCGATCGTGGTCACATAA
Position: -212
Score: 3.9 Sequence: TATTGAAATCGCACTCATATAT
Locus tag: ECA2165
|
||||
| ECA2165 | -255 | 3.9 | CATGGCGATCGTGGTCACATAA | |
| -212 | 3.9 | TATTGAAATCGCACTCATATAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ascF | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2715 | -177 | 4.2 | TCAGGTGACCGGTTTCACAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04070 | -179 | 4.4 | ACAAGTGATCATTCTCACAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03051 | -168 | 4.1 | CTTAGCGATCAAAATCACAAAA |
| Enterobacter sp. 638 | Ent638_3188 | -128 | 4.4 | CAAAGTGATCGTTATCACGAAT |
| -54 | 3.7 | TTTTGTGAAACCGGTTTCCTAT | ||
| Serratia proteamaculans 568 | Spro_0576 | -189 | 4.4 | AAAAGTGACCACCATCACGAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2165 | -255 | 3.9 | CATGGCGATCGTGGTCACATAA |
| -212 | 3.9 | TATTGAAATCGCACTCATATAT | ||
|
Position: -117
Score: 3.8 Sequence: ATCTGTGATCCCTCCCGCAATC
Locus tag: ECA2185
|
||||
| ECA2185 | -117 | 3.8 | ATCTGTGATCCCTCCCGCAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ychH | ||||
| Ortholog function: membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1205 | -105 | 4.5 | AATTGTGATCACGCCCGCACAT |
| Salmonella typhimurium LT2 | STM1782 | -105 | 4.4 | ATTTGTGATCGCACCCGCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01260 | -104 | 4.1 | AATTGTGATCGCCCACGCACTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02241 | -100 | 4.1 | TAATGTGATCGTGGACGCACTC |
| Enterobacter sp. 638 | Ent638_2343 | -119 | 3.7 | TGTTGTGACGAGAGTCATTAAT |
| -101 | 4 | TAATGTGATCATTCACGCAACT | ||
| Erwinia amylovora ATCC 49946 | EAM_1581 | -97 | 3.9 | AAATGTGATCGCTGACTCATCA |
| Yersinia pestis KIM | y2296 | -145 | 3.9 | AGTTGTGATCGCTACCGCAACA |
| Serratia proteamaculans 568 | Spro_1985 | -117 | 4.2 | ATTTGTGATCGCCTACGCAATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2185 | -275 | 3.6 | TAGCGTGATTATGAGAACGCTA |
| -117 | 3.8 | ATCTGTGATCCCTCCCGCAATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2065 | -189 | 4.1 | AGTTGTGATCGTGTCCGCAATG |
|
Position: -226
Score: 4.4 Sequence: ATATGCGCGCTAAATCACATAA
Position: -184
Score: 3.5 Sequence: TTTAGTGAAAAGCCCCACCATA
Locus tag: ECA2258
|
||||
| ECA2258 | -226 | 4.4 | ATATGCGCGCTAAATCACATAA | |
| -184 | 3.5 | TTTAGTGAAAAGCCCCACCATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mlc | ||||
| Ortholog function: ROK family transcriptional regulatory protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1594 | -108 | 4.1 | AAATGTGCTGTTAATCACATGC |
| Salmonella typhimurium LT2 | STM1488 | -65 | 3.8 | AGTATTGAAGTGTTTCACCATA |
| Citrobacter koseri ATCC BAA-895 | CKO_01593 | -107 | 3.6 | AAaTGTGcagTAaATCACAcgg |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01574 | -104 | 3.8 | AAATGTGCGGTAAATCACAAGG |
| Enterobacter sp. 638 | Ent638_1919 | -107 | 3.8 | AAATGTGCGGTAAATCACAAGG |
| Erwinia amylovora ATCC 49946 | EAM_1710 | -143 | 4.9 | TTATGTGCTGTAAATCACATTC |
| Yersinia pestis KIM | y2110 | -146 | 4.8 | TTATGTGCAGCAAATCACATAA |
| Serratia proteamaculans 568 | Spro_2283 | -111 | 4.8 | ATTTGTGCAGCAAATCACATAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2258 | -226 | 4.4 | ATATGCGCGCTAAATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_1713 | -113 | 4.8 | ATTTGTGCACTTAATCACATAA |
| Proteus mirabilis HI4320 | PMI1292 | -126 | 4.7 | ATATGTGCTTTCCATCACGATT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2226 | -119 | 4.8 | TTTCGTGCTGAATATCACATAT |
|
Position: -262
Score: 3.7 Sequence: TTTTGTGAAGCTGGTCAAAGGT
Locus tag: ECA2273
|
||||
| ECA2273 | -262 | 3.7 | TTTTGTGAAGCTGGTCAAAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araF | ||||
| Ortholog function: L-arabinose-binding periplasmic protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1901 | -163 | 4.2 | CGATGTGATATTGCTCTCCTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_01050 | -164 | 4 | CGGTGTGATGCCGCTCTCCTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02396 | -161 | 4 | CGATGTGATAATGCTCTCGTAT |
| -72 | 3.6 | TGTTTTGATGACGATTAAATTG | ||
| Enterobacter sp. 638 | Ent638_2476 | -162 | 3.7 | CGGTGTGATGGCGCTCTCTTAT |
| Erwinia amylovora ATCC 49946 | EAM_1698 | -251 | 4.3 | TTATGTGATGGCCTTCATATGT |
| Yersinia pestis KIM | y2096 | -283 | 4.3 | TTTTGTGATGTCAGTCAAAAGT |
| Serratia proteamaculans 568 | Spro_2245 | -251 | 3.8 | TTTTGTGACGGCTGTCATAAGT |
|
Position: -133
Score: 3.9 Sequence: ACCTTTGACCAGCTTCACAAAA
Locus tag: ECA2274
|
||||
| ECA2274 | -133 | 3.9 | ACCTTTGACCAGCTTCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araB | ||||
| Ortholog function: L-ribulokinase | ||||
| Erwinia amylovora ATCC 49946 | EAM_1697 | -131 | 4.1 | ACATATGAAGGCCATCACATAA |
| Yersinia pestis KIM | y2095 | -146 | 4.3 | ACTTTTGACTGACATCACAAAA |
| Serratia proteamaculans 568 | Spro_2244 | -132 | 3.9 | ACTTATGACAGCCGTCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2274 | -133 | 3.9 | ACCTTTGACCAGCTTCACAAAA |
|
Position: -315
Score: 4.5 Sequence: AAGTTCGATGTTGATCACAAAA
Locus tag: ECA2326
|
||||
| ECA2326 | -315 | 4.5 | AAGTTCGATGTTGATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1241 | -241 | 5 | AAATTTGATTTGGATCACGTAA |
| Salmonella typhimurium LT2 | STM1749 | -242 | 4.9 | AATCTTGATTTAGATCACACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01318 | -242 | 4.9 | AAATTTGATCTGGATCACGCAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -237 | 4.7 | ATACTTGATCTAAATCACGTAA |
| Enterobacter sp. 638 | Ent638_2304 | -253 | 4.1 | TAAATTGATTCAGATCATGTTT |
| Erwinia amylovora ATCC 49946 | EAM_1900 | -223 | 3.9 | ATTGATGATCTGCATCATCTTT |
| Yersinia pestis KIM | y2023 | -286 | 5.3 | TTTTGTGATTTAAATCACGAAA |
| Serratia proteamaculans 568 | Spro_2704 | -278 | 5.1 | TTTTATGATTTAAATCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -315 | 4.5 | AAGTTCGATGTTGATCACAAAA |
| Edwardsiella tarda EIB202 | ETAE_1508 | -265 | 5 | TTTCGTGACCTTAATCACAAAA |
| Proteus mirabilis HI4320 | PMI1486 | -246 | 5.4 | TATTGTGATGTAGATCACTTTA |
| -187 | 3.7 | AAAGGAGATCTTTTTAAAATAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -237 | 3.7 | TATTTTTATTAGATTAAAAATT |
| -138 | 4.6 | TTATGTGATTAAGATCAATATA | ||
|
Position: -135
Score: 5.6 Sequence: TTATGTGATACACATCACAATT
Locus tag: ECA2343
|
||||
| ECA2343 | -135 | 5.6 | TTATGTGATACACATCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msrB | ||||
| Ortholog function: methionine sulfoxide reductase B | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1778 | -137 | 5.2 | AAATGTGATTTTCATCACGATT |
| Salmonella typhimurium LT2 | STM1291 | -107 | 4.7 | TAATGTGACATCAGTCACGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01799 | -107 | 4.9 | AAACGTGATTCCGATCACGATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01198 | -135 | 5.1 | AAACGTGATTTAAGTCACAATT |
| Enterobacter sp. 638 | Ent638_1676 | -137 | 5.2 | ATATGTGAGAAAGATCACAATT |
| Erwinia amylovora ATCC 49946 | EAM_1930 | -137 | 5.2 | AATGGTGATCTGCATCACAATT |
| Yersinia pestis KIM | y2164 | -85 | 5.1 | ATTTGCGATTTTTATCACATTT |
| Serratia proteamaculans 568 | Spro_2727 | -143 | 5.7 | ATATGTGATCGGTATCACATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2343 | -135 | 5.6 | TTATGTGATACACATCACAATT |
| Edwardsiella tarda EIB202 | ETAE_1484 | -91 | 4.9 | GTTTGTGATGCTCATCACAAAA |
| Proteus mirabilis HI4320 | PMI1503 | -137 | 5.3 | TTATGTGAAATGTATCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2557 | -267 | 4.6 | ATATGCGAGTCACATCACAATA |
|
Position: -235
Score: 5.8 Sequence: AATTGTGATGTGTATCACATAA
Locus tag: ECA2344
|
||||
| ECA2344 | -235 | 5.8 | AATTGTGATGTGTATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gapA | ||||
| Ortholog function: glyceraldehyde-3-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1779 | -226 | 5.3 | AATCGTGATGAAAATCACATTT |
| Salmonella typhimurium LT2 | STM1290 | -226 | 4.8 | AATCGTGACTGATGTCACATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_01800 | -226 | 5 | AATCGTGATCGGAATCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01197 | -225 | 5.2 | AATTGTGACTTAAATCACGTTT |
| Enterobacter sp. 638 | Ent638_1675 | -225 | 5.7 | AATTGTGATCTTTCTCACATAT |
| Erwinia amylovora ATCC 49946 | EAM_1931 | -215 | 5.4 | AATTGTGATGCAGATCACCATT |
| Yersinia pestis KIM | y2165 | -218 | 5.1 | AAATGTGATAAAAATCGCAAAT |
| Serratia proteamaculans 568 | Spro_2728 | -227 | 5.6 | ATATGTGATACCGATCACATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2344 | -235 | 5.8 | AATTGTGATGTGTATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_1483 | -227 | 5.1 | TTTTGTGATGAGCATCACAAAC |
| Proteus mirabilis HI4320 | PMI1504 | -226 | 5.6 | AAATGTGATACATTTCACATAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2558 | -224 | 5.4 | TATTGTGATGTGACTCGCATAT |
|
Position: -345
Score: 4.9 Sequence: TGTTGTGATGAATATCACGATT
Position: -223
Score: 4.8 Sequence: TTTTGTGAATGGTTTCACAGTT
Locus tag: ECA2351
|
||||
| ECA2351 | -345 | 4.9 | TGTTGTGATGAATATCACGATT | |
| -223 | 4.8 | TTTTGTGAATGGTTTCACAGTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dadA | ||||
| Ortholog function: D-amino acid dehydrogenase small subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1189 | -116 | 4.7 | AGATGTGAGCCAGCTCACCATA |
| Salmonella typhimurium LT2 | STM1803 | -107 | 4.6 | ATATGTGAAGCACGTCACCATA |
| Citrobacter koseri ATCC BAA-895 | CKO_01193 | -107 | 4.5 | AGATGTGAGGTGCGTCACCATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02309 | -106 | 4.1 | TGCTGTGAGTTAAGTCACCATA |
| Enterobacter sp. 638 | Ent638_2363 | -107 | 4.3 | AGGTGTGAGGTAAGTCACCATA |
| Serratia proteamaculans 568 | Spro_2746 | -113 | 4.6 | AATTGTGAATGTTGTCACGTTT |
| Proteus mirabilis HI4320 | PMI1509 | -121 | 4.7 | AAATGTGATTTGACTCTAAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2561 | -114 | 5.4 | AATTGTGATCTAAATCATAAAT |
|
Position: -211
Score: 4 Sequence: AACTGTAACCAGTATCACAATG
Locus tag: ECA2363
|
||||
| ECA2363 | -211 | 4 | AACTGTAACCAGTATCACAATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glgS | ||||
| Ortholog function: glycogen synthesis protein GlgS | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3049 | -225 | 3.4 | AATAGTTTCCTTGCTTACATTT |
| -203 | 3.4 | ATCTGTGTTAATAATAACACAG | ||
| -124 | 3.8 | AAGTGTGATCGGGGACAATATA | ||
| Salmonella typhimurium LT2 | STM3197 | -222 | 3.3 | TCGCGTGATAATTTTCATGCTT |
| -178 | 4.2 | TCATGTGACCCATATCTCCTTA | ||
| -117 | 4.2 | TATTGTGATTTTGCGCATTAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04437 | -118 | 3.4 | AAGTGTGATGTCAGGCAACTGA |
|
Position: -132
Score: 3.8 Sequence: ATTAGTGATCGTTCTCGCAACC
Position: -75
Score: 3.7 Sequence: TAAAATAATGTTAATAACAATA
Locus tag: ECA2372
|
||||
| ECA2372 | -132 | 3.8 | ATTAGTGATCGTTCTCGCAACC | |
| -75 | 3.7 | TAAAATAATGTTAATAACAATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadD | ||||
| Ortholog function: long-chain-fatty-acid--CoA ligase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1805 | -131 | 3.7 | AATAGTGACGCGCTTCGCAACC |
| Salmonella typhimurium LT2 | STM1818 | -131 | 3.7 | AATAGTGACGCGCTTCGCAACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02322 | -97 | 3.7 | AATAGTGACGCGCTTCGCAACC |
| Erwinia amylovora ATCC 49946 | EAM_1956 | -130 | 3.9 | TTTAGTGATGCGCTTCGCAACC |
| Yersinia pestis KIM | y2236 | -80 | 4.1 | AATAGTGATGTATATCTCAACC |
| Serratia proteamaculans 568 | Spro_2760 | -99 | 3.9 | ATTAGTGACGTACATCGCAACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2372 | -132 | 3.8 | ATTAGTGATCGTTCTCGCAACC |
| -75 | 3.7 | TAAAATAATGTTAATAACAATA | ||
| Proteus mirabilis HI4320 | PMI1166 | -121 | 4.4 | TTTAGTGATACACTTCGCATCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2134 | -288 | 3.8 | AAATGCTATCTTAAGCAAAAAA |
| -137 | 4 | ATTAGTGATGTGTATCTCAACC | ||
|
Position: -267
Score: 3.8 Sequence: TAGTGTTGTTTGCATCATAAAT
Locus tag: ECA2389
|
||||
| ECA2389 | -267 | 3.8 | TAGTGTTGTTTGCATCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: b1821 | ||||
| Ortholog function: hypothetical protein | ||||
| Salmonella typhimurium LT2 | STM1834 | -276 | 3.7 | AATTGTTATTTAATTTAACGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2389 | -267 | 3.8 | TAGTGTTGTTTGCATCATAAAT |
| Proteus mirabilis HI4320 | PMI1608 | -272 | 3.8 | AATTATTATCAATATCATCTTT |
| -237 | 3.9 | TAATATGTTGCCTTTCATAAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2701 | -281 | 3.9 | TATTGTGCTATCTTTTAAATTG |
| -179 | 3.7 | AAACGTGGTGCGGGTAACCTTA | ||
|
Position: -176
Score: 3.7 Sequence: TGACGTTATCTGCTGCACCCAT
Position: 23
Score: 4.1 Sequence: TATTCTGCTATTTATCGCATTA
Locus tag: ECA2410
|
||||
| ECA2410 | -176 | 3.7 | TGACGTTATCTGCTGCACCCAT | |
| 23 | 4.1 | TATTCTGCTATTTATCGCATTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tcyP | ||||
| Ortholog function: L-cystine uptake protein TcyP | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1729 | -90 | 3.9 | ATATAAGAGCCAGCTCACAGTT |
| Salmonella typhimurium LT2 | STM1320 | -91 | 3.9 | ATATAAGAGCCAGCTCACAGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01755 | -90 | 3.7 | ATATAAGAGGTCGGTCACAGTT |
| Yersinia pestis KIM | y1878 | -166 | 3.6 | TGATTTGATTTAATACAAATCA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2410 | -176 | 3.7 | TGACGTTATCTGCTGCACCCAT |
|
Position: -145
Score: 3.5 Sequence: TATCGCGATACAGTTCATCACT
Locus tag: ECA2429
|
||||
| ECA2429 | -145 | 3.5 | TATCGCGATACAGTTCATCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ugpB | ||||
| Ortholog function: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3453 | -182 | 3.6 | ATCCGTGCCCCATCTCCCATTT |
| Salmonella typhimurium LT2 | STM3557 | -184 | 3.5 | ATCCGTGCCGTAGCTCCCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04874 | -185 | 3.3 | TATTTTTCTGTCATTCGCGCAT |
| -162 | 3.2 | TCATGTTACCTCGCGAGCATAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03813 | -88 | 3.4 | TATTTTTCTGTAATTCGAACAT |
| Enterobacter sp. 638 | Ent638_3856 | -162 | 3.5 | AGTTATTATTCCCGCCACATTA |
| -58 | 3.2 | TCATGTTACCTCGCGAGCATAA | ||
| Erwinia amylovora ATCC 49946 | EAM_3285 | -171 | 3.9 | GTGTGTGATGCCGTTAACACAG |
| Yersinia pestis KIM | y0434 | -72 | 3.5 | AAAACTGATTTATTTCGCTCAT |
| -41 | 4.1 | TTTTTTGATGTGAGCCACACAG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2429 | -145 | 3.5 | TATCGCGATACAGTTCATCACT |
| Edwardsiella tarda EIB202 | ETAE_3321 | -63 | 3.4 | CAATATGTTGTTTATCACTCAA |
|
Position: -58
Score: 4.3 Sequence: TAGATTGATCTAAATCACAATC
Locus tag: ECA2434
|
||||
| ECA2434 | -58 | 4.3 | TAGATTGATCTAAATCACAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_01286 | ||||
| Ortholog function: hypothetical protein | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2434 | -58 | 4.3 | TAGATTGATCTAAATCACAATC |
| Edwardsiella tarda EIB202 | ETAE_1900 | -70 | 5 | TTATGTGAGTGCTATCACAATA |
|
Position: -104
Score: 3.9 Sequence: AAACGTGTTATTGCTCACAAGT
Locus tag: ECA2577
|
||||
| ECA2577 | -104 | 3.9 | AAACGTGTTATTGCTCACAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citA | ||||
| Ortholog function: signal transduction histidine kinase regulating citrate/malate metabolism | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00054 | -269 | 4.3 | TAATGTGAAGCTTCCCAAATTA |
| Enterobacter sp. 638 | Ent638_3378 | -292 | 4.1 | TTATGTGAGGAACGGCATATTA |
| Serratia proteamaculans 568 | Spro_3731 | -272 | 4.6 | TGCTGTGATTTTGTTCAAAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2577 | -104 | 3.9 | AAACGTGTTATTGCTCACAAGT |
|
Position: -285
Score: 3.2 Sequence: TAACGTGTCGTTTTGCATAATG
Position: -78
Score: 3.5 Sequence: AAGTATGACGGGTATAAAAATG
Locus tag: ECA2594
|
||||
| ECA2594 | -285 | 3.2 | TAACGTGTCGTTTTGCATAATG | |
| -78 | 3.5 | AAGTATGACGGGTATAAAAATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serC | ||||
| Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0907 | -155 | 4.8 | TTGTGTGATGCAAGCCACATTT |
| Salmonella typhimurium LT2 | STM0977 | -142 | 4.2 | TTGTGTGACGCATGCCGCATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02165 | -171 | 4.6 | TTGTGTGACGTAGCGCGCATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00935 | -145 | 3.7 | TTGTGTGACGGCGGCCGCGTTT |
| Enterobacter sp. 638 | Ent638_1427 | -119 | 4.4 | TTGTGTGACGGTGGACACATTT |
| Yersinia pestis KIM | y2784 | -39 | 3.3 | TATAACGATGGCAATCTCAGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2594 | -78 | 3.5 | AAGTATGACGGGTATAAAAATG |
| Proteus mirabilis HI4320 | PMI0711 | -119 | 3.5 | TATTTTTGTGTGCTACACATAA |
|
Position: -79
Score: 4.5 Sequence: CAATATGATCCACATCAAATTT
Locus tag: ECA2596
|
||||
| ECA2596 | -79 | 4.5 | CAATATGATCCACATCAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: focA | ||||
| Ortholog function: formate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0904 | -156 | 3.6 | TATTTTTATTTGGATAATCAAA |
| -78 | 3.8 | AGATATGATCTATATCAATTTC | ||
| Salmonella typhimurium LT2 | STM0974 | -78 | 4.4 | AGATATGATCTATATCAAATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_02167 | -198 | 3.6 | TATTTTTATTTGGATAATCAAA |
| -120 | 4.4 | AGATATGATCTATATCAAATTC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00932 | -121 | 3.8 | AGATATGATCTATATCAATTTC |
| Enterobacter sp. 638 | Ent638_1424 | -78 | 3.8 | AGATATGATCTATATCAATTTC |
| Yersinia pestis KIM | y2789 | -84 | 4 | CAATATGATCCATATCAATTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2596 | -79 | 4.5 | CAATATGATCCACATCAAATTT |
| Proteus mirabilis HI4320 | PMI0706 | -188 | 4 | TTTTTTGATAAAATTTAAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1614 | -88 | 4.7 | AATTATGATCTATATCAAATTC |
|
Position: -6
Score: 3.8 Sequence: ATTTGTATGCCTTCTCACACTA
Locus tag: ECA2710
|
||||
| ECA2710 | -6 | 3.8 | ATTTGTATGCCTTCTCACACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yeiB | ||||
| Ortholog function: conserved inner membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2152 | -101 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Salmonella typhimurium LT2 | STM2192 | -101 | 4 | TTATGTGCGCTACCTCACGCAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00639 | -98 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02590 | -84 | 3.5 | TTCTGTGCGCCACCTCACGCAC |
| Enterobacter sp. 638 | Ent638_2752 | -84 | 3.9 | TTATGTGCGCCACCTCACGCAC |
| Serratia proteamaculans 568 | Spro_1561 | -121 | 4.3 | AATCTTGACCGGGTTCACGTTA |
| Proteus mirabilis HI4320 | PMI0640 | -86 | 4.9 | TAATGTGATTCAGCTCATCTAA |
|
Position: -180
Score: 4.1 Sequence: AAATGTGCGTGATGTCAAAATT
Locus tag: ECA2729
|
||||
| ECA2729 | -180 | 4.1 | AAATGTGCGTGATGTCAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruB | ||||
| Ortholog function: PTS system, fructose-specific IIA/FPr component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2169 | -178 | 4.3 | AATTGTGCAGCACATCAAACTT |
| Salmonella typhimurium LT2 | STM2206 | -177 | 4.6 | AAATGTGCTTCACCTCAAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00613 | -50 | 4.1 | AAGTGTGCTTTATCTCTAAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02600 | -177 | 3.5 | AAGTGTGCAGTACCTCTAAGTT |
| Enterobacter sp. 638 | Ent638_2763 | -178 | 4.3 | AAATGTGCTGCACTTCTAAATT |
| Erwinia amylovora ATCC 49946 | EAM_2223 | -179 | 4.4 | AAATGTGCTGGCTGTCAAAAAT |
| Yersinia pestis KIM | y2887 | -178 | 4.1 | AAATGTGCGGAATGTCAAAAAT |
| Serratia proteamaculans 568 | Spro_3230 | -177 | 4 | AAGTGTGCGTGAGGTCAAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2729 | -180 | 4.1 | AAATGTGCGTGATGTCAAAATT |
| Edwardsiella tarda EIB202 | ETAE_2303 | -199 | 4.1 | AAATGTGCTGAAGGTCTAAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1992 | -180 | 4.7 | AAATGTGAGTAATCTCAAAAAA |
|
Position: -159
Score: 3.9 Sequence: TAATGTGCATTCTGGCACACTT
Locus tag: ECA2735
|
||||
| ECA2735 | -159 | 3.9 | TAATGTGCATTCTGGCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spr | ||||
| Ortholog function: predicted peptidase, outer membrane lipoprotein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2175 | -130 | 4.1 | TTTTGTGCGTTAGTCCACAGAT |
| Salmonella typhimurium LT2 | STM2214 | -128 | 3.7 | ATTTGTGCGTTCCGCCACAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02608 | -292 | 3.6 | TAGGGTAATCTCGTTCTCGTTT |
| -234 | 4.2 | AATTGTGCGTGACTGCACAAAT | ||
| Enterobacter sp. 638 | Ent638_2771 | -250 | 3.6 | AATCGCTTTGTCTATCACAATT |
| Yersinia pestis KIM | y2908 | -128 | 3.7 | GAATGTGCGTTCATGCACATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2735 | -159 | 3.9 | TAATGTGCATTCTGGCACACTT |
| Edwardsiella tarda EIB202 | ETAE_2298 | -131 | 4.4 | AAGTGTGTTCTGCTGCACAATT |
| Proteus mirabilis HI4320 | PMI0831 | -129 | 4.2 | TTACGTGCTTTAGAGCACGTTT |
|
Position: -178
Score: 4 Sequence: ATTCGTGATCAGTTTGGCATTA
Position: -101
Score: 3.8 Sequence: TGTTGTTTTTTTGTTCACGAAA
Locus tag: ECA2740
|
||||
| ECA2740 | -178 | 4 | ATTCGTGATCAGTTTGGCATTA | |
| -101 | 3.8 | TGTTGTTTTTTTGTTCACGAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yejG | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2181 | -158 | 3.7 | AAACGTGACCACGCCCGCAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02614 | -204 | 3.8 | AAAGTTGTTTTGGATCACAGAA |
| Erwinia amylovora ATCC 49946 | EAM_2233 | -177 | 3.6 | AAATGAGCATTACTTCTCAAAA |
| Yersinia pestis KIM | y2914 | -238 | 4.4 | AAATGGGATCTGAATCCCAAAT |
| Serratia proteamaculans 568 | Spro_3250 | -214 | 4.2 | AAATGCGAGCTGAGTCGCAAAA |
| -121 | 4.1 | GCTTGTGATGTTTTTTACATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2740 | -178 | 4 | ATTCGTGATCAGTTTGGCATTA |
| -101 | 3.8 | TGTTGTTTTTTTGTTCACGAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2865 | -185 | 4.1 | AAATGAGAGATTGATCTCACTT |
| -183 | 3.6 | ATGAGAGATTGATCTCACTTTT | ||
| -141 | 3.8 | TAATGTAATACTATAAACACAA | ||
|
Position: -69
Score: 4.5 Sequence: ATTCGTGATCTGTGGCACGTAA
Locus tag: ECA2828
|
||||
| ECA2828 | -69 | 4.5 | ATTCGTGATCTGTGGCACGTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yohJ | ||||
| Ortholog function: LrgA family protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2141 | -68 | 4.9 | TAATGTGATCGGTAGCACGTTT |
| Salmonella typhimurium LT2 | STM2181 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00648 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02582 | -68 | 5 | TGATGTGATCGGTAGCACATTT |
| Enterobacter sp. 638 | Ent638_2744 | -68 | 4.7 | TGATGTGATCCGTAGCACGTTT |
| Yersinia pestis KIM | y2654 | -32 | 4.7 | TAGTGTGATGGGTAGCACAGAA |
| Serratia proteamaculans 568 | Spro_1570 | -62 | 4.3 | ATTTGTGGCGGAGGTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2828 | -69 | 4.5 | ATTCGTGATCTGTGGCACGTAA |
| Edwardsiella tarda EIB202 | ETAE_1164 | -68 | 4.9 | TGATGTGATCAGTAGCACATTT |
| Proteus mirabilis HI4320 | PMI0645 | -71 | 5.2 | TATTGTGATCCATAGCACACTT |
|
Position: -130
Score: 4.6 Sequence: AATTGAGATACATCTCGCATTT
Position: -79
Score: 4.5 Sequence: TAAAGAGATTCCGATCACAATT
Locus tag: ECA2830
|
||||
| ECA2830 | -130 | 4.6 | AATTGAGATACATCTCGCATTT | |
| -79 | 4.5 | TAAAGAGATTCCGATCACAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cdd | ||||
| Ortholog function: cytidine deaminase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2143 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 5.1 | TAATGAGATTCAGATCACATAT | ||
| Salmonella typhimurium LT2 | STM2183 | -128 | 4.2 | ATTTGCGATACGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTAGATCACATAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00646 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTGGATCACATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02584 | -78 | 4.4 | GAATGAGATATTCATCACATAT |
| Enterobacter sp. 638 | Ent638_2746 | -127 | 4.2 | ATTTGCGATGCGTCGCGCAATT |
| -77 | 4.9 | TAATGAGAACTGGATCACATAT | ||
| Erwinia amylovora ATCC 49946 | EAM_2202 | -124 | 3.9 | ACTTGCGATAAGTCTCTCATTT |
| -104 | 4.1 | TTTGGTGATGCATTTCATTTAT | ||
| -74 | 4.7 | TAGAGCGATTTAGATCACATAT | ||
| Yersinia pestis KIM | y2657 | -75 | 5 | TAATGAGATATAAATCACAATT |
| Serratia proteamaculans 568 | Spro_1568 | -127 | 4.1 | ACTTGCGATACATCTCGCAATT |
| -77 | 4.5 | TAAAGAGATTTACATCACACTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2830 | -130 | 4.6 | AATTGAGATACATCTCGCATTT |
| -79 | 4.5 | TAAAGAGATTCCGATCACAATT | ||
| Edwardsiella tarda EIB202 | ETAE_1162 | -76 | 4.9 | AAAAGTGATTATTATCACAAAT |
| Proteus mirabilis HI4320 | PMI0643 | -132 | 4.4 | ATTTGAGATGTATCTCCCAATT |
| -82 | 5.1 | AAATATGATTTTAATCACATAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1547 | -75 | 4.7 | CTATATGATATTTATCACATTA |
|
Position: -41
Score: 4 Sequence: TAATGCGCGCCAAATCACATTC
Locus tag: ECA3010
|
||||
| ECA3010 | -41 | 4 | TAATGCGCGCCAAATCACATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybiT | ||||
| Ortholog function: ABC transporter ATP-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0820 | -124 | 4.4 | AGATGTGTACGAAATCACATTT |
| Salmonella typhimurium LT2 | STM0838 | -124 | 4 | AGATGTGTACGAAATCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02298 | -148 | 4.4 | AGATGTGTACGAAATCACATTT |
| Enterobacter sp. 638 | Ent638_1311 | -125 | 4.4 | AGATGTGTACGAAATCACATTT |
| Yersinia pestis KIM | y2677 | -295 | 3.9 | TATCGTTATACCCGTCATACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3010 | -41 | 4 | TAATGCGCGCCAAATCACATTC |
| Edwardsiella tarda EIB202 | ETAE_2518 | -40 | 4.8 | TAATGTGAACAAAATCACGTTA |
|
Position: -95
Score: 4.2 Sequence: AGGTATGATGTTAATCATAAAT
Locus tag: ECA3039
|
||||
| ECA3039 | -95 | 4.2 | AGGTATGATGTTAATCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: acetate kinase | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02687 | -95 | 3.8 | AGGCATGATGTTAATCATAAAT |
| Enterobacter sp. 638 | Ent638_2840 | -96 | 3.8 | TGGCATGATGTTAATCATAAAT |
| Serratia proteamaculans 568 | Spro_3316 | -125 | 3.8 | TCACATGATGTTAATCATAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3039 | -95 | 4.2 | AGGTATGATGTTAATCATAAAT |
| Proteus mirabilis HI4320 | PMI1771 | -123 | 3.6 | AAGCATGATGCGTATCATTAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3095 | -121 | 3.6 | TAGCATGATGTTAATCATTTAA |
|
Position: -262
Score: 4.9 Sequence: TTTAGTGATATCAGTCACATTA
Locus tag: ECA3081
|
||||
| ECA3081 | -262 | 4.9 | TTTAGTGATATCAGTCACATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadL | ||||
| Ortholog function: Long-chain fatty acid transport protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2344 | -269 | 4.8 | ATAAGTGACCGAAATCACACTT |
| -247 | 3.9 | AAAAATGATCTAAAACAAAATT | ||
| Salmonella typhimurium LT2 | STM2391 | -262 | 4.8 | TTAAGTGACCGAAATCACACTT |
| -240 | 3.9 | AAAAATGATCTAAAACAAAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00446 | -263 | 4.8 | ATAAGTGACCGAAATCACACTT |
| -241 | 3.9 | AAAAATGATCTAAAACAAAAAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02726 | -264 | 4.7 | TTAAGTGACAGAAATCACACTT |
| -242 | 3.9 | AAAAATGATCTAAAACAAAAAT | ||
| Enterobacter sp. 638 | Ent638_2884 | -269 | 4.2 | GTAAGTGACCGATATCACACTA |
| -247 | 4 | AAAAATGATCTAGCGCAAAAAT | ||
| -214 | 3.7 | ATGAGTGCGACGGCTCGCATTT | ||
| Erwinia amylovora ATCC 49946 | EAM_2348 | -194 | 3.9 | TTTTGTTAAGCAGATCTCTTTT |
| Serratia proteamaculans 568 | Spro_3381 | -271 | 5.1 | TTAAGTGATGGAAATCACAAAT |
| -196 | 3.8 | TTTTGTTAGCCAGATCTCTCTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3081 | -332 | 3.8 | AATTTTTATCTTCCTTATATTT |
| -262 | 4.9 | TTTAGTGATATCAGTCACATTA | ||
| Proteus mirabilis HI4320 | PMI1810 | -326 | 3.7 | AAGTGTTAATTATCTATCATAA |
| -186 | 4.2 | TAATGTTAACTAAATCCCAAAT | ||
|
Position: -195
Score: 3.7 Sequence: TTCTGTGATCGCCTCAATATTA
Locus tag: ECA3158
|
||||
| ECA3158 | -195 | 3.7 | TTCTGTGATCGCCTCAATATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdaC | ||||
| Ortholog function: Serine transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2796 | -179 | 4.2 | ATTTGAGATCAAGATCACTGAT |
| Salmonella typhimurium LT2 | STM2970 | -176 | 4.2 | ATTTGAGATCGGGATCACTGAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04152 | -176 | 4.1 | ATTTGGGATCGCGATCACTGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03139 | -158 | 4.2 | ATTTGAGATCGCGATCACTGAT |
| Enterobacter sp. 638 | Ent638_3249 | -176 | 4.1 | ATTTGGGATCAGGATCACTGAT |
| Erwinia amylovora ATCC 49946 | EAM_1294 | -300 | 3.6 | ATTTGTTAAAAATCGCAAAAAA |
| -180 | 3.9 | AAATGTGATTCCGATCACCGGC | ||
| Yersinia pestis KIM | y2862 | -286 | 4.3 | AATTGAGATCACGATCACGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3158 | -195 | 3.7 | TTCTGTGATCGCCTCAATATTA |
| Proteus mirabilis HI4320 | PMI0672 | -283 | 4.3 | ATTTGAGATGGTGATCACGGTA |
|
Position: -308
Score: 4.8 Sequence: TTATGTGATCGCTATCAACAAT
Position: -154
Score: 4 Sequence: TATAGTGAAACTGATTACATTG
Locus tag: ECA3171
|
||||
| ECA3171 | -308 | 4.8 | TTATGTGATCGCTATCAACAAT | |
| -154 | 4 | TATAGTGAAACTGATTACATTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galT | ||||
| Ortholog function: galactose-1-phosphate uridylyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0758 | -78 | 3.8 | TAATTTATTCCATGTCACACTT |
| Salmonella typhimurium LT2 | STM0775 | -78 | 3.7 | TAATTTATTACATGTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02377 | -36 | 3.7 | TAATATATTCCATGTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00772 | -78 | 3.7 | TAACTTGTGCTATGTCACACTT |
| -44 | 4.1 | ATATGCTATCTTCCTCACAAAC | ||
| Yersinia pestis KIM | y3044 | -163 | 3.7 | TTATTTGTCTATGCTCACAGAA |
| Serratia proteamaculans 568 | Spro_1292 | -143 | 4 | TTTTTCGCTCTGGATCACCTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3171 | -154 | 4 | TATAGTGAAACTGATTACATTG |
| Edwardsiella tarda EIB202 | ETAE_2565 | -195 | 3.7 | TAGTGTAAGCGATACCACAAAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0575 | -120 | 4.3 | TTGCGTGATTGGTATCTCAGAT |
|
Position: -84
Score: 3.7 Sequence: TTTTGCGTCCTTCCTCTCATTT
Position: -31
Score: 3.9 Sequence: AAATTTGGCCTGCCTCATATTT
Locus tag: ECA3183
|
||||
| ECA3183 | -84 | 3.7 | TTTTGCGTCCTTCCTCTCATTT | |
| -31 | 3.9 | AAATTTGGCCTGCCTCATATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC | ||||
| Ortholog function: Nucleoside permease NupC | ||||
| Yersinia pestis KIM | y1499 | -136 | 4.4 | TTATGTGATCAAGCCCACTAAT |
| -84 | 3.9 | ATTTGTGGTTCACATCTCTTTT | ||
| Serratia proteamaculans 568 | Spro_3416 | -84 | 3.6 | ATTTGCAATAGACCTCTCGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3183 | -84 | 3.7 | TTTTGCGTCCTTCCTCTCATTT |
| -31 | 3.9 | AAATTTGGCCTGCCTCATATTT | ||
|
Position: -199
Score: 4 Sequence: AAAATTGATTTAAGTCAAAGAT
Locus tag: ECA3288
|
||||
| ECA3288 | -199 | 4 | AAAATTGATTTAAGTCAAAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: grcA | ||||
| Ortholog function: Autonomous glycyl radical cofactor | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3288 | -199 | 4 | AAAATTGATTTAAGTCAAAGAT |
|
Position: -86
Score: 4 Sequence: AAAAGCGATCAATCTCACGCTT
Locus tag: ECA3349
|
||||
| ECA3349 | -86 | 4 | AAAAGCGATCAATCTCACGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: raiA | ||||
| Ortholog function: stationary phase translation inhibitor and ribosome stability factor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2597 | -81 | 4.8 | TTATGAGATTTTCATCACACAT |
| Citrobacter koseri ATCC BAA-895 | CKO_03918 | -40 | 5.2 | TAATGTGATTTAAATCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02919 | -88 | 5.6 | AAATGTGATTTATATCACACAT |
| Enterobacter sp. 638 | Ent638_3076 | -81 | 5.4 | ATGTGTGATTTAGATCACACAT |
| Erwinia amylovora ATCC 49946 | EAM_2617 | -83 | 5.2 | AAATGTGATTTCAATCACGATT |
| Serratia proteamaculans 568 | Spro_0882 | -83 | 4.8 | ATACGTGATTTTCATCACGCAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3349 | -86 | 4 | AAAAGCGATCAATCTCACGCTT |
| Edwardsiella tarda EIB202 | ETAE_2834 | -82 | 3.8 | ATCCGTGATTTTCCTCTCACAC |
| Proteus mirabilis HI4320 | PMI0391 | -82 | 4.6 | AAAAGTGATCTTGATCATGTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1266 | -87 | 5.1 | AATAGTGATTTAGATCACCTTT |
|
Position: -296
Score: 4.2 Sequence: TAGTGCGAGGTATTTCACGAAA
Position: -204
Score: 5.1 Sequence: AAATGTGATCAAACTCACCAAA
Locus tag: ECA3578
|
||||
| ECA3578 | -296 | 4.2 | TAGTGCGAGGTATTTCACGAAA | |
| -204 | 5.1 | AAATGTGATCAAACTCACCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: garD | ||||
| Ortholog function: D-galactarate dehydratase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3128 | -210 | 4.2 | TATTTTGAGCATATGCACATAA |
| -127 | 4.4 | ATGATTGACATTGATCACATTT | ||
| -52 | 3.7 | AAATGAGACCAGGTCCTCATTT | ||
| Salmonella typhimurium LT2 | STM3250 | -153 | 4.3 | TGCGGTGATCTGGATCACATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_04527 | -54 | 4 | AGTTGTTCTCTTTAACACATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03540 | -125 | 4.8 | AGGAGTGATGCCGATCACATTT |
| Enterobacter sp. 638 | Ent638_3570 | -143 | 4.7 | AGGGGTGATCTTGATCACATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3578 | -296 | 4.2 | TAGTGCGAGGTATTTCACGAAA |
| -204 | 5.1 | AAATGTGATCAAACTCACCAAA | ||
|
Position: -258
Score: 3.7 Sequence: TAAAGTGATTATCGTCTCTAAA
Locus tag: ECA3601
|
||||
| ECA3601 | -258 | 3.7 | TAAAGTGATTATCGTCTCTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysQ | ||||
| Ortholog function: PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4214 | -126 | 3.6 | AACAGTGAAGAATGCCACAATT |
| Salmonella typhimurium LT2 | STM4404 | -144 | 3.9 | TTTTTTGCGAGTGTTCACAGAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03615 | -178 | 4.1 | TTTTTAGATCTGAAACACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04608 | -178 | 4.1 | TTTTATGAGCGATAGCACAGAA |
| -126 | 3.7 | AAATGTGAATCTTGCCAGAAAA | ||
| -57 | 3.9 | TGATGCGATATAAATAAAACAA | ||
| Enterobacter sp. 638 | Ent638_0393 | -167 | 3.9 | TTTTTCGATCCAAGCCACAAAA |
| Erwinia amylovora ATCC 49946 | EAM_0455 | -158 | 4.2 | AAATGTGACACAGCACGAATAA |
| Serratia proteamaculans 568 | Spro_0454 | -180 | 3.7 | AACTGTGAAGTGTGGCAGAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3601 | -258 | 3.7 | TAAAGTGATTATCGTCTCTAAA |
|
Position: -246
Score: 4.5 Sequence: TAATGTGATTAACATCCAAAAA
Locus tag: ECA3772
|
||||
| ECA3772 | -246 | 4.5 | TAATGTGATTAACATCCAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_00488 | ||||
| Ortholog function: LacI-family transcriptional regulator | ||||
| Salmonella typhimurium LT2 | STM2345 | -192 | 4 | AGCTGCGATCGTTATCACAAAG |
| -143 | 4.6 | AATTGTGATAGCGCTATCAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00488 | -192 | 4.6 | ATCTGTGATCATATTCACAAAG |
| -143 | 4.5 | ATATGTGATAGCGCTATCAAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01748 | -155 | 4.2 | AACTGTGATACACCTCCCAAAG |
| -53 | 3.6 | AGTTATAATGCGATTCGCAGAT | ||
| Enterobacter sp. 638 | Ent638_2847 | -178 | 4.1 | AGCTGCGATCAAGATCACAAAG |
| -129 | 4.6 | AATTGTGATAGCGCTATCAAAT | ||
| Yersinia pestis KIM | y1619 | -208 | 5.4 | TAATGTGATCTGGATCTCAATT |
| -158 | 4.6 | ATTTGTGATAGCGCTATCATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3772 | -246 | 4.5 | TAATGTGATTAACATCCAAAAA |
| -196 | 4 | AACTGTGACCGGCTTAGCACAA | ||
| Edwardsiella tarda EIB202 | ETAE_3025 | -210 | 4.3 | TTTCGTGATAGCGCTATCATTT |
| Proteus mirabilis HI4320 | PMI1778 | -139 | 4.2 | AATTGTGATAGCGCTATTATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1978 | -195 | 3.8 | GCTAGTGATATTAGTCACAAAT |
| -145 | 4.7 | AATTGTGATAGCGCTATCATTT | ||
|
Position: -213
Score: 3.4 Sequence: GATAGTGACATTGGACACATAG
Position: -163
Score: 4.3 Sequence: TTATGTGAACGAATTAACAATC
Locus tag: ECA3778
|
||||
| ECA3778 | -213 | 3.4 | GATAGTGACATTGGACACATAG | |
| -163 | 4.3 | TTATGTGAACGAATTAACAATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acnB | ||||
| Ortholog function: Aconitate hydratase 2 (EC 4.2.1.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0118 | -144 | 3.5 | TTTTGTAAACAGATTAACACCT |
| Salmonella typhimurium LT2 | STM0158 | -157 | 3.9 | TTTTGTAAACAGATTAACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00124 | -260 | 3.5 | TTTTGTAAACAGATTAACACCT |
| Yersinia pestis KIM | y0771 | -276 | 4.3 | TTATGTGAACGAATTAACACTG |
| Serratia proteamaculans 568 | Spro_4008 | -192 | 3.9 | TTATGTGAACGAATTAACAACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3778 | -163 | 4.3 | TTATGTGAACGAATTAACAATC |
| Proteus mirabilis HI4320 | PMI2040 | -177 | 4.5 | TTATGTGAACGAATTAACATAG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3619 | -261 | 3.6 | TTCTGTGAACGAATTAACATCG |
|
Position: -64
Score: 3.8 Sequence: AATTTTGATGAAACTACCACAA
Locus tag: ECA3781
|
||||
| ECA3781 | -64 | 3.8 | AATTTTGATGAAACTACCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fepA | ||||
| Ortholog function: iron-enterobactin outer membrane transporter | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3781 | -64 | 3.8 | AATTTTGATGAAACTACCACAA |
|
Position: -120
Score: 3.7 Sequence: ATTGGTGATTTAGCTCAAGGTC
Position: -55
Score: 3.4 Sequence: TTTTGAAATTGGTATTACCAAT
Locus tag: ECA3790
|
||||
| ECA3790 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC | |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pdhR | ||||
| Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0113 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0151 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03260 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00117 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0659 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0746 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0766 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4012 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3790 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0658 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2047 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -129
Score: 4.4 Sequence: ATTTGCTATATCCATCACACTT
Locus tag: ECA3792
|
||||
| ECA3792 | -129 | 4.4 | ATTTGCTATATCCATCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araT | ||||
| Ortholog function: putative permease of the Na+:galactoside symporter family | ||||
| Erwinia amylovora ATCC 49946 | EAM_0744 | -128 | 5.3 | AATTGTTATCTGCTTCACATTA |
| Serratia proteamaculans 568 | Spro_4014 | -139 | 4.1 | TTTTGCAAGCTGGCTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3792 | -129 | 4.4 | ATTTGCTATATCCATCACACTT |
|
Position: -172
Score: 5.5 Sequence: TTATGTGATTAAAATCACATAA
Locus tag: ECA3796
|
||||
| ECA3796 | -172 | 5.5 | TTATGTGATTAAAATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tsx | ||||
| Ortholog function: Nucleoside-specific channel-forming protein Tsx precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0411 | -250 | 3.7 | TTTTGTTACTCTGCTTACATCA |
| -129 | 3.9 | AACTGTGAAACGAAACATATTT | ||
| Salmonella typhimurium LT2 | STM0413 | -129 | 4 | ATATGTGAAACAAGACATATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02750 | -131 | 3.7 | ATCTGTGAAACAAGACATATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00363 | -131 | 3.8 | TTATGTGAAACAACACGTATTT |
| Enterobacter sp. 638 | Ent638_0879 | -124 | 4.1 | ATATGTGAAACAACACATATTT |
| Erwinia amylovora ATCC 49946 | EAM_2589 | -218 | 5.3 | ATTTGTGATAAAAATCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3796 | -172 | 5.5 | TTATGTGATTAAAATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_2935 | -245 | 4.6 | TAATTTGATGAGAATCTCAATT |
|
Position: -53
Score: 3.9 Sequence: AAACGTGTTAAGTATCAAATAG
Locus tag: ECA3804
|
||||
| ECA3804 | -53 | 3.9 | AAACGTGTTAAGTATCAAATAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yacG | ||||
| Ortholog function: zinc-binding protein | ||||
| Erwinia amylovora ATCC 49946 | EAM_0725 | -75 | 4.4 | TCGTGTGATCTGCGCCACATTA |
| Yersinia pestis KIM | y0755 | -259 | 3.8 | AAATGTGATCGGGCGTAAAACA |
| Serratia proteamaculans 568 | Spro_0772 | -158 | 3.8 | CAGTGTGACCGCCCGCTCATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3804 | -53 | 3.9 | AAACGTGTTAAGTATCAAATAG |
| Edwardsiella tarda EIB202 | ETAE_0648 | -272 | 4 | AAATGTGATCATACAAACGATT |
| Proteus mirabilis HI4320 | PMI2054 | -80 | 3.8 | TCTTGTGATAAAAATCAGTTTA |
|
Position: -334
Score: 3.6 Sequence: TTTTATGAACGATTTAGCATAG
Position: -83
Score: 3.7 Sequence: AATCGTGATCGATTACACGTCC
Locus tag: ECA3892
|
||||
| ECA3892 | -334 | 3.6 | TTTTATGAACGATTTAGCATAG | |
| -83 | 3.7 | AATCGTGATCGATTACACGTCC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjtD | ||||
| Ortholog function: RNA methyltransferase, TrmH family, group 1 | ||||
| Salmonella typhimurium LT2 | STM4600 | -97 | 3.6 | TTCAGTGATATCAGTTAAAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03386 | -222 | 3.7 | AGGTGTGATTCATTCTAAATTA |
| -53 | 4.2 | TATGTTGACATTGGTCACATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04857 | -94 | 4 | TTTAGTGATTTTTGTTGCAAAT |
| Enterobacter sp. 638 | Ent638_0563 | -54 | 4.3 | TATGTTGAGGTGGATCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3892 | -83 | 3.7 | AATCGTGATCGATTACACGTCC |
|
Position: -214
Score: 3.9 Sequence: TTTGGTACTTAATATCACATTT
Locus tag: ECA3905
|
||||
| ECA3905 | -214 | 3.9 | TTTGGTACTTAATATCACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serA | ||||
| Ortholog function: D-3-phosphoglycerate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2913 | -210 | 4.1 | TTTGGTGACATGTGTCACGCTT |
| Salmonella typhimurium LT2 | STM3062 | -217 | 4.5 | TTTGGTGACATGTATCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03348 | -214 | 4.6 | TTTGGTGACTTCTGTCACATTT |
| Enterobacter sp. 638 | Ent638_3332 | -215 | 4.1 | TTCGGTGACTTGTATCACGTTT |
| Yersinia pestis KIM | y3301 | -126 | 4.8 | TTTGGTGATATATATCACATTC |
| Serratia proteamaculans 568 | Spro_3923 | -215 | 4.4 | TTTGGTGACATATGTCACATTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3905 | -214 | 3.9 | TTTGGTACTTAATATCACATTT |
| Proteus mirabilis HI4320 | PMI2031 | -210 | 4 | TTCAGTGATATATATCACACGA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3605 | -207 | 4.4 | TTTAGTGATATATTTCATATCT |
| -178 | 4.2 | TTATTTGATCTAAATCCTAATT | ||
| -105 | 4.4 | TTATGTGATGGGAATAGCAATC | ||
|
Position: -50
Score: 3.5 Sequence: AAATGTGGCATAGTGAAAAAAA
Locus tag: ECA3907
|
||||
| ECA3907 | -50 | 3.5 | AAATGTGGCATAGTGAAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iciA | ||||
| Ortholog function: chromosome replication initiation inhibitor protein | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03350 | -107 | 3.8 | CCCTGCGATGCAGATCACACAA |
| Enterobacter sp. 638 | Ent638_3334 | -126 | 3.9 | CCCTGTGACCGGTGTCACATTA |
| -48 | 3.7 | ATTTGTGTCATAGTGCAGAATA | ||
| Yersinia pestis KIM | y3303 | -249 | 3.7 | TAATTCTAGCGAGATCACAGTT |
| Edwardsiella tarda EIB202 | ETAE_2951 | -48 | 3.8 | TAACGTTTTATACATAACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3610 | -41 | 3.6 | CATAGTGATATTCAGAAAAATA |
|
Position: -194
Score: 4.1 Sequence: TTTTATGACGCAGGTCACTCTT
Locus tag: ECA3913
|
||||
| ECA3913 | -194 | 4.1 | TTTTATGACGCAGGTCACTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: epd | ||||
| Ortholog function: D-erythrose 4-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2927 | -213 | 4.7 | AAGTGTGATGTGAGTCAGATAA |
| Salmonella typhimurium LT2 | STM3070 | -213 | 5 | AAATGTGATGCAGGTCAGATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04297 | -213 | 4.8 | AAGTGTGATGCAGGTCAGATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03356 | -213 | 4.8 | AAATGTGATGTGAGTCATATAG |
| Enterobacter sp. 638 | Ent638_3340 | -215 | 4.5 | AAATGTGACGCAAGTCATATAG |
| Erwinia amylovora ATCC 49946 | EAM_2813 | -208 | 4.1 | TTTTGTGACGCAGATCGAAAGT |
| Yersinia pestis KIM | y3309 | -216 | 3.7 | AATTGTGCCCTTTTTCAGGGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3913 | -194 | 4.1 | TTTTATGACGCAGGTCACTCTT |
| Edwardsiella tarda EIB202 | ETAE_2958 | -233 | 4.9 | AATTGTGATGCAATGCACGTTT |
| Proteus mirabilis HI4320 | PMI0241 | -253 | 4.4 | AAATGTTAACAAGAGCACATTT |
|
Position: -185
Score: 3.3 Sequence: TTTTTTAATTTTAATCTTCATT
Locus tag: ECA3991
|
||||
| ECA3991 | -185 | 3.3 | TTTTTTAATTTTAATCTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceB | ||||
| Ortholog function: malate synthase A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4014 | -117 | 3.6 | AATTGTTTTTGATTTTGCATTT |
| Salmonella typhimurium LT2 | STM4183 | -168 | 3.3 | TTAATTTATATTGTTATCAATA |
| Citrobacter koseri ATCC BAA-895 | CKO_03906 | -166 | 3.3 | TATTTTTATTGTTATCAATAAG |
| Yersinia pestis KIM | y0015 | -254 | 3.3 | ATGAGTTATAGCCATTAAAAAT |
| Serratia proteamaculans 568 | Spro_4503 | -228 | 3.5 | TGTTGTTATGTTTATTAACCAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3991 | -185 | 3.3 | TTTTTTAATTTTAATCTTCATT |
| Proteus mirabilis HI4320 | PMI2764 | -68 | 3.7 | ATTTTTGATTTTTGTAAAAACT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4396 | -65 | 3.8 | GTTTTTGATTTATTTTAAATAT |
|
Position: -105
Score: 3.6 Sequence: TTACTCGATCCGTGTCACTTTT
Locus tag: ECA3993
|
||||
| ECA3993 | -105 | 3.6 | TTACTCGATCCGTGTCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yrdA | ||||
| Ortholog function: carbonic anhydrase, family 3 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3279 | -220 | 3.8 | TCCTGTGAAGTGTTTCACGTTG |
| Salmonella typhimurium LT2 | STM3399 | -222 | 4.3 | TTGTGTGAAGTGATTCACATCC |
| Citrobacter koseri ATCC BAA-895 | CKO_04691 | -221 | 3.9 | TCTTGTGAAGCGTTTCACTTTG |
| -81 | 3.8 | ATTTTTGATACCTGAAACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03680 | -221 | 4.6 | TTGTGTGAAGTGATTCACATCT |
| Enterobacter sp. 638 | Ent638_3711 | -222 | 4.6 | TTGTGTGAAGTGATTCACATCT |
| -47 | 3.6 | TAATGCGATCAAAGTCTTCTAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3993 | -105 | 3.6 | TTACTCGATCCGTGTCACTTTT |
| Edwardsiella tarda EIB202 | ETAE_3192 | -235 | 4.1 | TCCTGTGATGTTGTTCACATGT |
|
Position: -91
Score: 3 Sequence: GAATTTTATTTTTTTAGCAGTT
Position: -36
Score: 3.2 Sequence: ATTTGCGCAGTGAATTACAACA
Locus tag: ECA4064
|
||||
| ECA4064 | -91 | 3 | GAATTTTATTTTTTTAGCAGTT | |
| -36 | 3.2 | ATTTGCGCAGTGAATTACAACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: cyclic AMP receptor protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3357 | -154 | 3.3 | TACATTGATGTACTGCATGTAT |
| -136 | 3.3 | GTATGCAAAGGACGTCACATTA | ||
| Salmonella typhimurium LT2 | STM3466 | -159 | 3.1 | TACATTGACGTACTGCATGTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04777 | -160 | 3.1 | TACATTGACGTACTGCATGTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03743 | -158 | 3.3 | TACATTGATGTACTGCATGTAT |
| Enterobacter sp. 638 | Ent638_3784 | -128 | 2.9 | AAACATTACAGGCTGCAAACAT |
| Yersinia pestis KIM | y3956 | -309 | 3 | AATTTAGACTACCCTTTCATTT |
| Serratia proteamaculans 568 | Spro_4580 | -121 | 3.5 | ATTTATGACACGCCTCAAAACC |
| Proteus mirabilis HI4320 | PMI2820 | -135 | 3.3 | TATTATAATCTATTCCTTATTA |
|
Position: -81
Score: 4 Sequence: TTTTATGATTGCTATCGCGGTT
Locus tag: ECA4106
|
||||
| ECA4106 | -81 | 4 | TTTTATGATTGCTATCGCGGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pck | ||||
| Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3403 | -240 | 4.2 | GAATGCGATTCCACTCACAATA |
| -137 | 4 | TTTCGTGACAGGAATCACGGAG | ||
| Salmonella typhimurium LT2 | STM3500 | -241 | 4 | GAATGCGATTACAGTCACATTA |
| -107 | 3.9 | AATCGTGATTTTGTCCAGATAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04825 | -107 | 3.9 | AATCGTGATTTTGTCCAGATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03773 | -242 | 3.7 | GAAAGCGATTACATTCACATTT |
| -138 | 3.7 | CTTCGTGACAGGAGTCACCGTT | ||
| Enterobacter sp. 638 | Ent638_3816 | -241 | 4.1 | GTATGCGATTACATTCACATTA |
| Yersinia pestis KIM | y3918 | -130 | 4.2 | ATTCGTGTTCCATCTCTCATAA |
| -80 | 3.8 | ATATTTGATAGCTATCGCTGTT | ||
| Serratia proteamaculans 568 | Spro_4617 | -80 | 4.1 | ATATTTGATACCTATCGCGGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4106 | -81 | 4 | TTTTATGATTGCTATCGCGGTT |
| Edwardsiella tarda EIB202 | ETAE_3277 | -82 | 3.9 | TTTTTTGATGACTATCTCGGTT |
| Proteus mirabilis HI4320 | PMI3015 | -131 | 4 | ATTTGTGCATTAGTTCTCGTTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0100 | -86 | 3.8 | TTTTTTGATAACTATCGCTGTT |
|
Position: -144
Score: 4.3 Sequence: TAATGTGACAACTATCATCATA
Position: -124
Score: 4.4 Sequence: TATTGTTAGCTTCATCACGCAT
Position: -99
Score: 3.7 Sequence: TGTTTTTATTTGGTTAACCATT
Locus tag: ECA4141
|
||||
| ECA4141 | -144 | 4.3 | TAATGTGACAACTATCATCATA | |
| -124 | 4.4 | TATTGTTAGCTTCATCACGCAT | ||
| -99 | 3.7 | TGTTTTTATTTGGTTAACCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpD | ||||
| Ortholog function: glycerol-3-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3426 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Salmonella typhimurium LT2 | STM3526 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04845 | -116 | 4.5 | TAATGTTATATGTATCACTCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03792 | -119 | 3.7 | ATATGTTACACCCATCACTTCA |
| -58 | 3.7 | TATAGTGAGCGATATCGAGCAT | ||
| Enterobacter sp. 638 | Ent638_3835 | -116 | 4.4 | TTATGTTATCTCTATCACTCAA |
| -55 | 4 | TATTATGAGCGATATCGAACAT | ||
| Erwinia amylovora ATCC 49946 | EAM_3265 | -124 | 4 | AGACGTTATCGGCATCACGCAT |
| Yersinia pestis KIM | y3891 | -129 | 4.4 | AAATGTTACCTCCATCACGCAT |
| Serratia proteamaculans 568 | Spro_4642 | -129 | 3.6 | AACTGTTACCTCTATCACGCCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4141 | -144 | 4.3 | TAATGTGACAACTATCATCATA |
| -124 | 4.4 | TATTGTTAGCTTCATCACGCAT | ||
| Edwardsiella tarda EIB202 | ETAE_3312 | -124 | 4.3 | TTGTGTTATCCGCATCGCGTAA |
| Proteus mirabilis HI4320 | PMI2930 | -129 | 4.4 | AATTGTTATTTATATCACGCAG |
|
Position: -148
Score: 5.1 Sequence: TTTAGTGATGCAAATCACACTT
Locus tag: ECA4165
|
||||
| ECA4165 | -148 | 5.1 | TTTAGTGATGCAAATCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpA | ||||
| Ortholog function: sn-glycerol-3-phosphate dehydrogenase subunit A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2241 | -165 | 4.6 | AAATGTGAATTGCCGCACACAT |
| Salmonella typhimurium LT2 | STM2284 | -163 | 5 | TAATGTGAATTACAGCACATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00536 | -163 | 4.7 | TAATGTGAATTACAGCACAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02647 | -165 | 4.3 | TACTGTGAAACATCGCACAATT |
| -115 | 3.8 | ATGTGAGCACGAAATCACATAA | ||
| Enterobacter sp. 638 | Ent638_2805 | -163 | 4.1 | TACTGTGAATCAACGCACAGAT |
| Yersinia pestis KIM | y0404 | -231 | 3.6 | AATTGTTACCTATTTTATGAAA |
| -155 | 4.4 | ACCTGTGATTTTGATCACAATC | ||
| Serratia proteamaculans 568 | Spro_0200 | -231 | 3.6 | CGCTGTGATGGATGGCGCAATT |
| -138 | 4.9 | AATCGTGATTATGATCACATTC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4165 | -148 | 5.1 | TTTAGTGATGCAAATCACACTT |
| Edwardsiella tarda EIB202 | ETAE_3115 | -247 | 4 | TACTGTGAGAGATCGCTCATAT |
| -142 | 4.8 | TAGAGTGATTTTGATCACATTG | ||
| Proteus mirabilis HI4320 | PMI3592 | -262 | 3.7 | TACTGTGAAGTAATACTCAGTT |
| -170 | 5.5 | ATTTGTGATTAGTATCACATAT | ||
|
Position: -253
Score: 3.7 Sequence: ATGTTTGATAAAGAGCAAAAAC
Position: -193
Score: 4.9 Sequence: AAGTGTGATTTGCATCACTAAA
Locus tag: ECA4166
|
||||
| ECA4166 | -253 | 3.7 | ATGTTTGATAAAGAGCAAAAAC | |
| -193 | 4.9 | AAGTGTGATTTGCATCACTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpT | ||||
| Ortholog function: glycerol-3-phosphate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2240 | -219 | 3.7 | TTGTTTGATTTCGCGCATATTC |
| -179 | 3.6 | AAACGTGATTTCATGCGTCATT | ||
| -129 | 4.6 | ATGTGTGCGGCAATTCACATTT | ||
| Salmonella typhimurium LT2 | STM2283 | -220 | 3.6 | ATGTTTGATTTCGCGCATAATC |
| -180 | 4.2 | AAACGTGATTTCGTGCGCCTTT | ||
| -131 | 5.2 | ATATGTGCTGTAATTCACATTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00537 | -221 | 3.6 | TTGTTTGATTTCGCGCATAATC |
| -181 | 4 | AAACGTGATTTCGTGCGCTTTT | ||
| -132 | 4.8 | ATCTGTGCTGTAATTCACATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02646 | -218 | 3.8 | TTGTTTGATTTCGAGCATATTC |
| -178 | 4.6 | TTATGTGATTTCGTGCTCACAT | ||
| -128 | 4.5 | AATTGTGCGATGTTTCACAGTA | ||
| Enterobacter sp. 638 | Ent638_2804 | -201 | 3.6 | TTGTTTGATTTCGAACATAATC |
| -161 | 3.8 | AAGCGTGATCTCATGCGCTTAT | ||
| -111 | 4 | ATCTGTGCGTTGATTCACAGTA | ||
| Erwinia amylovora ATCC 49946 | EAM_0195 | -240 | 3.7 | AAACGCGATGCGGTTAACGATG |
| -147 | 3.7 | ATTTGTGCCTCTCTTCACGGTC | ||
| Serratia proteamaculans 568 | Spro_0199 | -249 | 4.5 | GAATGTGATCATAATCACGATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4166 | -253 | 3.7 | ATGTTTGATAAAGAGCAAAAAC |
| -193 | 4.9 | AAGTGTGATTTGCATCACTAAA | ||
| Edwardsiella tarda EIB202 | ETAE_3116 | -200 | 3.7 | ATATGAGCGATCTCTCACAGTA |
| Proteus mirabilis HI4320 | PMI3591 | -291 | 3.6 | ATGTTTGATAATGAGCAAAAAC |
| -232 | 5.4 | ATATGTGATACTAATCACAAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4119 | -250 | 4.9 | TATTGTGACAATTGTCACAATT |
|
Position: -118
Score: 4 Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: ECA4187
|
||||
| ECA4187 | -118 | 4 | AGGTGTTAAATTGATCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cyaA | ||||
| Ortholog function: Adenylate cyclase (EC 4.6.1.1) | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4187 | -118 | 4 | AGGTGTTAAATTGATCACGTTT |
|
Position: -130
Score: 3.7 Sequence: TTGTGCAACCTTGTTAACAAAT
Locus tag: ECA4218
|
||||
| ECA4218 | -130 | 3.7 | TTGTGCAACCTTGTTAACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putP | ||||
| Ortholog function: Proline/sodium symporter PutP (TC 2.A.21.2.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1015 | -207 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Salmonella typhimurium LT2 | STM1125 | -204 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Citrobacter koseri ATCC BAA-895 | CKO_02041 | -80 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Enterobacter sp. 638 | Ent638_1542 | -249 | 3.7 | TTTTATGCGGCACTTAACACTT |
| Serratia proteamaculans 568 | Spro_2930 | -211 | 3.9 | AAATGTGACGCAGGGTAAACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4218 | -130 | 3.7 | TTGTGCAACCTTGTTAACAAAT |
| Proteus mirabilis HI4320 | PMI1615 | -220 | 3.8 | TAGTGTGAAGTTACATACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1958 | -243 | 4.4 | AAATGTGATTCAGTAAACGTTT |
|
Position: -144
Score: 3.9 Sequence: AATTGCGACCCATTACGCACAA
Locus tag: ECA4230
|
||||
| ECA4230 | -144 | 3.9 | AATTGCGACCCATTACGCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yifB | ||||
| Ortholog function: magnesium chelatase family protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3765 | -266 | 4.2 | TTTTATGATGCGTTTAATAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04266 | -226 | 4.1 | TTATATGAAAAAAATCAAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4230 | -144 | 3.9 | AATTGCGACCCATTACGCACAA |
| Edwardsiella tarda EIB202 | ETAE_0086 | -128 | 3.7 | TATTGTTAATGTGTTAATAATT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4686 | -268 | 3.7 | TAATTTAATTTAAATTTCAAAA |
|
Position: -68
Score: 3.7 Sequence: TATTGTTAGCCTACTTACCATA
Locus tag: ECA4235
|
||||
| ECA4235 | -68 | 3.7 | TATTGTTAGCCTACTTACCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytfR | ||||
| Ortholog function: Putative sugar ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4485 | -98 | 3.7 | AAGTGTGATGTAACGCAATCTG |
| Citrobacter koseri ATCC BAA-895 | CKO_03602 | -130 | 3.7 | AGTTGTGATTAACCTTTTATTT |
| Yersinia pestis KIM | y0329 | -229 | 3.8 | TGGTGTGACGCCGCTCATTATT |
| Serratia proteamaculans 568 | Spro_4767 | -163 | 4.3 | TGATGTGATGCCGCTCATTATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4235 | -68 | 3.7 | TATTGTTAGCCTACTTACCATA |
|
Position: -153
Score: 4.3 Sequence: TTTTTTGACGCGCAACACACAT
Locus tag: ECA4266
|
||||
| ECA4266 | -153 | 4.3 | TTTTTTGACGCGCAACACACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: facilitator for glycerol uptake | ||||
| Yersinia pestis KIM | y0046 | -139 | 4 | TTTCATGACGAATAACACATAT |
| Serratia proteamaculans 568 | Spro_4797 | -183 | 4.1 | TTTTATGACGAAGCACACACAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4266 | -153 | 4.3 | TTTTTTGACGCGCAACACACAT |
| Edwardsiella tarda EIB202 | ETAE_3441 | -139 | 3.9 | TTTTTTGACGACACACACACAT |
|
Position: -92
Score: 4.5 Sequence: TTATGTGATAAAAATCACCACA
Locus tag: ECA4327
|
||||
| ECA4327 | -92 | 4.5 | TTATGTGATAAAAATCACCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbJ | ||||
| Ortholog function: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2736 | -90 | 4.9 | TTATGTGAATCAGATCACCATA |
| Salmonella typhimurium LT2 | STM2918 | -90 | 4 | TTTTGTGAAACAACTCACCGCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01605 | -91 | 5 | ATTCGTGATAACTCTCACATAT |
| Erwinia amylovora ATCC 49946 | EAM_1106 | -90 | 4.4 | TGATGTGAAGTTTATCACTAAT |
| Serratia proteamaculans 568 | Spro_1492 | -92 | 4.1 | AATTGTGACAACGATCGCTGAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4327 | -92 | 4.5 | TTATGTGATAAAAATCACCACA |
| Edwardsiella tarda EIB202 | ETAE_1922 | -93 | 3.9 | ATTTGTGAGGATAAACACGGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2507 | -147 | 3.8 | ATAAATAATATAAATCAAATAA |
| -90 | 3.7 | GAATGTGATAACCATCGTGTAT | ||
|
Position: -157
Score: 3.8 Sequence: TGACGTGATTCAGCTCTTGTTT
Locus tag: ECA4362
|
||||
| ECA4362 | -157 | 3.8 | TGACGTGATTCAGCTCTTGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctA | ||||
| Ortholog function: C4-dicarboxylate transport protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3528 | -143 | 4.1 | TTGTGCGAGCCAGCTCAAACTT |
| Salmonella typhimurium LT2 | STM3614 | -145 | 4.1 | TTGTGCGAGCCAGCTCAAACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04970 | -145 | 4 | TTGTGCGAGCCAGCTCAAAGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03878 | -143 | 3.9 | TTGTGCGAGTCAGCTCAAAGAT |
| Erwinia amylovora ATCC 49946 | EAM_3380 | -134 | 4.4 | TGAAGTGATTCAGCTCATAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4362 | -157 | 3.8 | TGACGTGATTCAGCTCTTGTTT |
| Edwardsiella tarda EIB202 | ETAE_3379 | -155 | 3.6 | TTATGCGTTTCAGCTCATAGAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3205 | -176 | 4.9 | TTATGTGATCTATATCTTAAAA |
|
Position: -164
Score: 4.2 Sequence: TTTTGTGATCCAGATTGTAGTA
Locus tag: ECA4419
|
||||
| ECA4419 | -164 | 4.2 | TTTTGTGATCCAGATTGTAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dgoR | ||||
| Ortholog function: GntR domain protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4479 | -154 | 4.2 | TTTTGTGATCTAAATTGTAGTA |
| Salmonella typhimurium LT2 | STM3830 | -154 | 4.2 | TTTTGTGATCTAAATTGTAGTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04098 | -154 | 4.1 | TTTTGTGATCCAAATTGTAGTA |
| Enterobacter sp. 638 | Ent638_0006 | -154 | 4.2 | TTTTGTGATCCAGATTGTAGTA |
| Serratia proteamaculans 568 | Spro_0041 | -103 | 4.2 | TTTTGTGATCTTGATTGTAGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4419 | -164 | 4.2 | TTTTGTGATCCAGATTGTAGTA |
|
Position: -228
Score: 3.8 Sequence: TTACGTTATACCCGTCATACTT
Locus tag: ECA4428
|
||||
| ECA4428 | -228 | 3.8 | TTACGTTATACCCGTCATACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yidA | ||||
| Ortholog function: Phosphatase YidA | ||||
| Yersinia pestis KIM | y4109 | -57 | 4.1 | ATTTGTGTGCTGAATCGCGTTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4428 | -228 | 3.8 | TTACGTTATACCCGTCATACTT |
|
Position: -254
Score: 5 Sequence: TTATGTGAGTCACATCACAGAT
Locus tag: ECA4519
|
||||
| ECA4519 | -254 | 5 | TTATGTGAGTCACATCACAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: atpI | ||||
| Ortholog function: ATP synthase subunit I | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3739 | -263 | 4.8 | ATATGTGATCTGAAGCACGCTT |
| Salmonella typhimurium LT2 | STM3872 | -262 | 4.6 | ATGTGTGATCTGGTGCACGCTT |
| -211 | 4.1 | TTTTGTACGATCGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00079 | -262 | 4.7 | ATATGTGATCCGAAGCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04144 | -262 | 4.7 | TTATGTGATCTGATGCACGCTT |
| Enterobacter sp. 638 | Ent638_4125 | -261 | 4.8 | TTTTGTGATCTCGTGCACGCTT |
| Erwinia amylovora ATCC 49946 | EAM_3481 | -264 | 4.4 | ATTTGTGATCGTGGACACGCTT |
| Yersinia pestis KIM | y4142 | -263 | 5.4 | TTATGTGATGTATTTCACGTTT |
| Serratia proteamaculans 568 | Spro_0001 | -265 | 4.4 | TATTGTGAGCAACTACACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4519 | -254 | 5 | TTATGTGAGTCACATCACAGAT |
| Edwardsiella tarda EIB202 | ETAE_3526 | -297 | 3.7 | AATCGTGAAAATATTTAAATTA |
| Proteus mirabilis HI4320 | PMI3057 | -259 | 5 | TTGTGTGTTCTAGATCACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0047 | -265 | 5.7 | TTATGTGATTTAAATCACATTT |