Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NagC regulog to Dickeya dadantii 3937

Reference regulog properties
Source regulog: NagC - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya dadantii 3937
Orthologous TF(s) null
Regulated genes 2
Built upon 68 sites [see more]
Predicted regulatory interactions in Dickeya dadantii 3937
Locus tag Position Score Sequence
Position: -241
Score: 5.7
Sequence: AATAATTCGTTACGCAAATTAAT
Locus tag: null
null -241 5.7 AATAATTCGTTACGCAAATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Escherichia coli str. K-12 substr. MG1655 b0678 -209 5.9 TTTAATTCGTATCGCAAATTAAA
-115 4.6 CTTATTTTATCATTCAAAAAATC
Salmonella typhimurium LT2 STM0684 -202 5.8 ATTAATTCGCCTCGCAAATTAAA
-108 4.8 CTTATTTTATGATTCAAAAAATC
Citrobacter koseri ATCC BAA-895 CKO_02486 -215 6 ATTAATTCGTATCGCAAATTAAA
-121 4.6 CTTATTTTATCATTCAAAAAATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00699 -214 6 ATTAATTCGTATCGCAAATTAAA
-120 4.6 CTTATTTTATCATTCAAAAAATC
Enterobacter sp. 638 Ent638_1193 -215 6 ATTAATTCGTATCGCAAATTAAA
-121 4.6 CTTATTTTATCATTCAAAAAATC
Erwinia amylovora ATCC 49946 EAM_1147 -225 5.4 ATAAATTCGTACAGCAAATTAAT
-131 4.8 CTTATTTTATGATTCAAAAAATC
Yersinia pestis KIM y1202 -245 6 ATTATTTCGTAACGCAAATTAAA
-151 5.2 CTTATTTTATCATCCGAAAAAAT
Serratia proteamaculans 568 Spro_1227 -225 6 ATTATTTCGTATCGCAAATTAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1326 -211 5.7 AATAATTCGCTACACAAATTAAA
-118 4.6 CTTATTTCAAGATTAAAAAAAAC
Edwardsiella tarda EIB202 ETAE_2617 -221 5.6 ATTATTTTTCTCCGCAAATTAAA
-127 4.6 CTTATTTTATCATTCGAAAAATC
Proteus mirabilis HI4320 PMI0454 -248 6.1 ATTATTTTGTATCGCAAATTAAT
-154 4.8 CTTATTTTATGATTAAAAATATC
Photorhabdus luminescens subsp. laumondii TTO1 plu1317 -232 5 TTTATTTTTCTTGCAAAAATAAG
-138 4.7 CTTATTTTAATATAAAAAATATC
Position: -117
Score: 5.7
Sequence: ATTAATTTGCGTAACGAATTATT
Locus tag: null
null -117 5.7 ATTAATTTGCGTAACGAATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagE
Ortholog function: PTS system, N-acetylglucosamine-specific IIABC component
Enterobacter sp. 638 Ent638_1194 -132 6 TTTAATTTGCGATACGAATTAAT
Yersinia pestis KIM y1203 -270 5.2 ATTTTTTCGGATGATAAAATAAG
-176 6 TTTAATTTGCGTTACGAAATAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1327 -172 5.7 TTTAATTTGTGTAGCGAATTATT
Edwardsiella tarda EIB202 ETAE_2616 -127 5.6 TTTAATTTGCGGAGAAAAATAAT
Proteus mirabilis HI4320 PMI0455 -120 6.1 ATTAATTTGCGATACAAAATAAT
© 2009-2020 RegPrecise