Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YrkD regulog to Bacillus megaterium QM B1551

Reference regulog properties
Source regulog: YrkD - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus megaterium QM B1551
Orthologous TF(s) BMQ_3345, BMQ_3874
Regulated genes 7
Built upon 39 sites [see more]
Predicted regulatory interactions in Bacillus megaterium QM B1551
Locus tag Position Score Sequence
Position: -38
Score: 5.2
Sequence: ATACCCCTACTAGTAT
Locus tag: BMQ_3340
BMQ_3340 -38 5.2 ATACCCCTACTAGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkF
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2347 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Bacillus amyloliquefaciens FZB42 RBAM_005450 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0793 -29 5.8 ATACCCCTACAGGTAT
Bacillus licheniformis DSM 13 BLi02793 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Bacillus pumilus SAFR-032 BPUM_0192 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Bacillus subtilis subsp. subtilis str. 168 BSU26530 -101 4.6 ATACCCCCTATGGTAT
-34 5.2 ATACCCGCAGGGGTAA
Geobacillus kaustophilus HTA426 GK2066 -69 5.5 ATACCCATATATGTAT
Oceanobacillus iheyensis HTE831 OB2651 -116 5.9 ATACCTGTACGGGTAT
-45 5.4 ATACCTATGCGGGTAT
Position: -44
Score: 5.8
Sequence: ATACCCTTACAGGTAT
Locus tag: BMQ_3344
BMQ_3344 -44 5.8 ATACCCTTACAGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkI
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2345 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Geobacillus kaustophilus HTA426 GK2070 -52 5.6 ATACCCATAGGGGTAA
Position: -87
Score: 5.8
Sequence: ATACCTATAGGGGTAT
Locus tag: BMQ_3346
BMQ_3346 -87 5.8 ATACCTATAGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK2072
Ortholog function: Rhodanese-like domain protein
Geobacillus kaustophilus HTA426 GK2072 -56 5.1 ATACTATTAGGGGTAT
Position: -96
Score: 5.3
Sequence: ATACCCTAATAGGTAT
Locus tag: BMQ_3874
BMQ_3874 -96 5.3 ATACCCTAATAGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkD
Ortholog function: Transcriptional regulator, RcnR family
Anoxybacillus flavithermus WK1 Aflv_1433 -28 5.2 ATACTGATAAGGGTAT
Bacillus amyloliquefaciens FZB42 RBAM_005420 -127 5.8 ATACCTGTAAGGGTAT
Bacillus cereus ATCC 14579 BC0792 -71 5 ATACCCTATAGGGTAT
Bacillus licheniformis DSM 13 BLi02795 -184 5.5 ATACGCATAGGGGTAT
Bacillus pumilus SAFR-032 BPUM_0189 -46 5.2 ATACCGCTTAGGGTAT
Bacillus subtilis subsp. subtilis str. 168 BSU26550 -508 5.4 ATACCtaTggGGGTAT
Geobacillus kaustophilus HTA426 GK2071 -56 5.1 ATACTATTAGGGGTAT
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