Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FabR regulog to Dickeya dadantii Ech703

Reference regulog properties
Source regulog: FabR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya dadantii Ech703
Orthologous TF(s) Dd703_3786
Regulated genes 4
Built upon 40 sites [see more]
Predicted regulatory interactions in Dickeya dadantii Ech703
Locus tag Position Score Sequence
Position: -40
Score: 5.8
Sequence: AACGTACACCTGTTCGCT
Locus tag: Dd703_0633
Dd703_0633 -40 5.8 AACGTACACCTGTTCGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lcfH
Ortholog function: putative long-chain-fatty-acid--CoA ligase
Yersinia pestis KIM y3641 -84 5.8 AGTGAACACCTGTACGCT
Serratia proteamaculans 568 Spro_0747 -82 5.5 AGTAAACACGTGTAAGCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3830 -60 5.6 AATGTACAGCTGTACGCT
Edwardsiella tarda EIB202 ETAE_0624 -82 5.5 AGTGCACAGCTGTACGCT
Proteus mirabilis HI4320 PMI2081 -92 6.1 AGCGAACAGGTGTAAGCT
Photorhabdus luminescens subsp. laumondii TTO1 plu3671 -114 5.9 AGCTAACACCTGTAAGCT
Position: -55
Score: 6.2
Sequence: AGCGTACATCTGTACGCT
Locus tag: Dd703_1563
Dd703_1563 -55 6.2 AGCGTACATCTGTACGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabA
Ortholog function: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase
Escherichia coli str. K-12 substr. MG1655 b0954 -56 6.3 AGCGTACACGTGTTAGCT
Salmonella typhimurium LT2 STM1067 -56 6.3 AGCGTACACGTGTTAGCT
Citrobacter koseri ATCC BAA-895 CKO_02114 -56 6.3 AGCGTACACGTGTTAGCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00983 -57 6 AGCTTACACGTGTTAGCT
Enterobacter sp. 638 Ent638_1466 -56 6.3 AGCGTACACGTGTTAGCT
Erwinia amylovora ATCC 49946 EAM_1374 -57 5.8 TGCTTACAACTGTAAGCT
Yersinia pestis KIM y2740 -56 6.3 AGCGTACAGCTGTACGCT
Serratia proteamaculans 568 Spro_1751 -56 6.5 AGCGTACACGTGTAAGCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1748 -56 6.4 AGCGTACAGGTGTACGCT
Edwardsiella tarda EIB202 ETAE_1264 -56 6.2 AGCGTACACCTGTTAGCT
Proteus mirabilis HI4320 PMI0782 -56 6.5 AGCGTACAAGTGTAAGCT
Photorhabdus luminescens subsp. laumondii TTO1 plu1772 -57 6.1 AGCGTACAAGTGTACTCT
Position: -110
Score: 5.9
Sequence: AGCGTACAGGTGTACACT
Locus tag: Dd703_3307
Dd703_3307 -110 5.9 AGCGTACAGGTGTACACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hyIII
Ortholog function: COG1272: Predicted membrane protein, hemolysin III homolog
Escherichia coli str. K-12 substr. MG1655 b2899 -81 5.1 AGCTAACAGGTGTTCACT
Salmonella typhimurium LT2 STM3049 -82 4.9 AGCTAACATGTGTTCACT
Citrobacter koseri ATCC BAA-895 CKO_04262 -80 5.1 AGCTAACAGGTGTTCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03327 -80 5.1 AGCTAACAGGTGTTCACT
Enterobacter sp. 638 Ent638_3317 -86 5.1 AGCTAACAGGTGTTCACT
Erwinia amylovora ATCC 49946 EAM_2786 -108 5.9 AGCTTACAAGTGTACTCT
Yersinia pestis KIM y3285 -121 5.9 AGCGTACAGGTGTACACT
Serratia proteamaculans 568 Spro_3900 -89 5.9 AGCGTACACGTGTACACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0757 -157 5.7 AGCTTACACGTGTACACT
Edwardsiella tarda EIB202 ETAE_2937 -139 5.9 AGCGTACACGTGTACACT
© 2009-2020 RegPrecise