Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GntR regulog to Dickeya dadantii Ech703

Reference regulog properties
Source regulog: GntR - Enterobacteriales  
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya dadantii Ech703
Orthologous TF(s) Dd703_0265
Regulated genes 2
Built upon 61 sites [see more]
Predicted regulatory interactions in Dickeya dadantii Ech703
Locus tag Position Score Sequence
Position: -129
Score: 4.4
Sequence: TCACGTTATGCGTAACATGT
Locus tag: Dd703_0221
Dd703_0221 -129 4.4 TCACGTTATGCGTAACATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: idnD
Ortholog function: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Escherichia coli str. K-12 substr. MG1655 b4267 -146 3.8 TAtTtcTACtGaTAAgAaTT
-116 3.8 TcAcGTTAtgcGTAACATag
Salmonella typhimurium LT2 STM4484 -116 4.3 TcAcGTTAtgcGTAACATTg
Serratia proteamaculans 568 Spro_3287 -120 4.2 TcAcGTTAaaGGTAACAgcT
Position: -91
Score: 5.5
Sequence: TGATGTTACGGGTATCATGA
Position: -77
Score: 5.7
Sequence: TCATGATACCGGTAACATGT
Locus tag: Dd703_0266
Dd703_0266 -91 5.5 TGATGTTACGGGTATCATGA
-77 5.7 TCATGATACCGGTAACATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Yersinia pestis KIM y3876 -91 5.6 ATTTGTTACCGGTATCATGA
-77 5.5 TCATGATACCGGTAACATGG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4159 -77 5.3 ATATGATACGGGTAACATGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1839 -91 5.4 ACTTGTTACCGGTATCATGA
-77 5.1 TCATGATACCGGTAACGTGA
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