Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AbgR regulog to Dickeya dadantii Ech703

Reference regulog properties
Source regulog: AbgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor (activator)
Biological process: p-aminobenzoyl-glutamate utilization
Effector: p-aminobenzoyl-glutamate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya dadantii Ech703
Orthologous TF(s) Dd703_0515
Regulated genes 2
Built upon 12 sites [see more]
Predicted regulatory interactions in Dickeya dadantii Ech703
Locus tag Position Score Sequence
Position: -27
Score: 5.3
Sequence: GATAACTCATGGTTATC
Locus tag: Dd703_0515
Dd703_0515 -27 5.3 GATAACTCATGGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: abgR
Ortholog function: transcriptional regulator AbgR
Escherichia coli str. K-12 substr. MG1655 b1339 -130 5.1 GATAGTTTTTACTTATC
-26 5.6 GATAAATAACGGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01535 -121 5.3 GATAGCTTTTGTTTATC
-26 5.5 GATAAGCAACGGTTATC
Serratia proteamaculans 568 Spro_4199 -28 5.6 GATAAACAACGGTTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3727 -30 5.1 TATAATTAAAAGTTATC
Position: -163
Score: 5.3
Sequence: GATAACCATGAGTTATC
Locus tag: Dd703_0516
Dd703_0516 -163 5.3 GATAACCATGAGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: abgA
Ortholog function: aminobenzoyl-glutamate utilization protein A
Escherichia coli str. K-12 substr. MG1655 b1338 -166 5.6 GATAACCGTTATTTATC
-62 5.1 GATAAGTAAAAACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01534 -157 5.5 GATAACCGTTGCTTATC
-62 5.3 GATAAACAAAAGCTATC
Serratia proteamaculans 568 Spro_4200 -260 5.6 GATAACCGTTGTTTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3726 -261 5.1 GATAACTTTTAATTATA