Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NsrR regulog to Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 73 sites [see more]
Predicted regulatory interactions in Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
Locus tag Position Score Sequence
Position: -92
Score: 3.7
Sequence: ATAAGATTTAAAATACAGT
Locus tag: HDEF_0059
HDEF_0059 -92 3.7 ATAAGATTTAAAATACAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -248 4.1 TAGTCATTTTCAATACAAC
Salmonella typhimurium LT2 STM1369 -248 3.8 TAGTCATTTTCTATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -116 4 TATGCTTATAAAAAGCACT
Enterobacter sp. 638 Ent638_1760 -249 3.8 TAGGCATTATCTATACATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -191 3.9 AATAAATTAAAGATATACC
Position: -39
Score: 3.9
Sequence: GTAGTTTTATAAATATAAA
Position: 23
Score: 4.3
Sequence: GTTTCAAATAAAAAATAAC
Locus tag: HDEF_1491
HDEF_1491 -39 3.9 GTAGTTTTATAAATATAAA
23 4.3 GTTTCAAATAAAAAATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: grxD
Ortholog function: Probable monothiol glutaredoxin ydhD
Escherichia coli str. K-12 substr. MG1655 b1654 -135 4.4 CGAATATTTGAAATGCAAC
Salmonella typhimurium LT2 STM1433 -208 3.7 GATGTAAAAAAATAGCAAT
-135 3.7 AAGATATTTTGTATACAAC
Citrobacter koseri ATCC BAA-895 CKO_01665 -134 4.3 GAGATATTTAGAATGCAAC