Propagation of MalR regulog to Bacillus megaterium QM B1551
| Source regulog: | MalR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | CitB |
| Regulation mode: | activator |
| Biological process: | Malate utilization |
| Effector: | MalK, sensor histidine kinase (malate) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus megaterium QM B1551 |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -348
Score: 5.1 Sequence: TTTTTATAATT-(8)-TTTCCATATTA
Position: -337
Score: 6.1 Sequence: AAACATTTTTT-(13)-TTATTTTGACT
Position: -336
Score: 5.7 Sequence: AACATTTTTTC-(12)-TTATTTTGACT
Position: -332
Score: 5.3 Sequence: TTTTTTCCATA-(8)-TTATTTTGACT
Position: -329
Score: 5.4 Sequence: TTTCCATATTA-(5)-TTATTTTGACT
Position: -313
Score: 5.6 Sequence: TTATTTTGACT-(12)-TGAATAGAATA
Position: -155
Score: 5.1 Sequence: TAAAATATACT-(4)-TCAAATGAATT
Position: -88
Score: 5.2 Sequence: TGAGTAATATC-(11)-TTAATTACTTA
Position: -66
Score: 5.5 Sequence: TTAATTACTTA-(8)-CAACTTGTATG
Position: -62
Score: 6.3 Sequence: TTACTTAAATC-(4)-CAACTTGTATG
Locus tag: BMQ_2057
|
||||
| BMQ_2057 | -348 | 5.1 | TTTTTATAATT-(8)-TTTCCATATTA | |
| -337 | 6.1 | AAACATTTTTT-(13)-TTATTTTGACT | ||
| -336 | 5.7 | AACATTTTTTC-(12)-TTATTTTGACT | ||
| -332 | 5.3 | TTTTTTCCATA-(8)-TTATTTTGACT | ||
| -329 | 5.4 | TTTCCATATTA-(5)-TTATTTTGACT | ||
| -313 | 5.6 | TTATTTTGACT-(12)-TGAATAGAATA | ||
| -155 | 5.1 | TAAAATATACT-(4)-TCAAATGAATT | ||
| -88 | 5.2 | TGAGTAATATC-(11)-TTAATTACTTA | ||
| -66 | 5.5 | TTAATTACTTA-(8)-CAACTTGTATG | ||
| -62 | 6.3 | TTACTTAAATC-(4)-CAACTTGTATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywkA | ||||
| Ortholog function: NAD-dependent malate dehydrogenase (EC 1.1.1.38) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034210 | -206 | -0.8 | AACTTAAAAAA-(10)-AAATTAAGTAA |
| Bacillus licheniformis DSM 13 | BLi03953 | -242 | -0.8 | AACTTAATTAA-(10)-AAATTAACTAA |
| Bacillus pumilus SAFR-032 | BPUM_3348 | -209 | 0.5 | AAATTAAATAA-(10)-AAATTATCTAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37050 | -156 | -1 | AATTTAAATAA-(10)-AAATTAAGTAA |
|
Position: 10
Score: 5.1 Sequence: GTCAAATTTTT-(13)-CTATCTTTTTT
Position: 11
Score: 6.2 Sequence: TCAAATTTTTC-(12)-CTATCTTTTTT
Position: 12
Score: 5.8 Sequence: CAAATTTTTCT-(11)-CTATCTTTTTT
Position: 13
Score: 5.2 Sequence: AAATTTTTCTC-(10)-CTATCTTTTTT
Position: 16
Score: 5.5 Sequence: TTTTTCTCATT-(7)-CTATCTTTTTT
Position: 18
Score: 5.1 Sequence: TTTCTCATTCT-(5)-CTATCTTTTTT
Locus tag: BMQ_2632
|
||||
| BMQ_2632 | 10 | 5.1 | GTCAAATTTTT-(13)-CTATCTTTTTT | |
| 11 | 6.2 | TCAAATTTTTC-(12)-CTATCTTTTTT | ||
| 12 | 5.8 | CAAATTTTTCT-(11)-CTATCTTTTTT | ||
| 13 | 5.2 | AAATTTTTCTC-(10)-CTATCTTTTTT | ||
| 16 | 5.5 | TTTTTCTCATT-(7)-CTATCTTTTTT | ||
| 18 | 5.1 | TTTCTCATTCT-(5)-CTATCTTTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywkB | ||||
| Ortholog function: Malate permease | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034200 | -206 | -0.8 | AACTTAAAAAA-(10)-AAATTAAGTAA |
| Bacillus licheniformis DSM 13 | BLi03952 | -242 | -0.8 | AACTTAATTAA-(10)-AAATTAACTAA |
| Bacillus pumilus SAFR-032 | BPUM_3347 | -209 | 0.5 | AAATTAAATAA-(10)-AAATTATCTAA |
|
Position: -175
Score: 5.6 Sequence: TTTATTGTTAG-(12)-TTTCATTTATC
Position: -174
Score: 5.9 Sequence: TTATTGTTAGG-(11)-TTTCATTTATC
Position: -168
Score: 5.6 Sequence: TTAGGTTGAAC-(5)-TTTCATTTATC
Position: -101
Score: 6.1 Sequence: TCAATCTCTTT-(2)-TTGTTTTCATT
Position: -97
Score: 6 Sequence: TCTCTTTTTTT-(2)-TTTCATTAAAA
Position: -93
Score: 5.1 Sequence: TTTTTTTGTTT-(4)-TAAAAATAAAT
Position: -89
Score: 5.1 Sequence: TTTGTTTTCAT-(13)-TTAAAAATATA
Position: -88
Score: 5.8 Sequence: TTGTTTTCATT-(12)-TTAAAAATATA
Locus tag: BMQ_2633
|
||||
| BMQ_2633 | -175 | 5.6 | TTTATTGTTAG-(12)-TTTCATTTATC | |
| -174 | 5.9 | TTATTGTTAGG-(11)-TTTCATTTATC | ||
| -168 | 5.6 | TTAGGTTGAAC-(5)-TTTCATTTATC | ||
| -101 | 6.1 | TCAATCTCTTT-(2)-TTGTTTTCATT | ||
| -97 | 6 | TCTCTTTTTTT-(2)-TTTCATTAAAA | ||
| -93 | 5.1 | TTTTTTTGTTT-(4)-TAAAAATAAAT | ||
| -89 | 5.1 | TTTGTTTTCAT-(13)-TTAAAAATATA | ||
| -88 | 5.8 | TTGTTTTCATT-(12)-TTAAAAATATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywkA | ||||
| Ortholog function: NAD-dependent malate dehydrogenase (EC 1.1.1.38) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034210 | -206 | -0.8 | AACTTAAAAAA-(10)-AAATTAAGTAA |
| Bacillus licheniformis DSM 13 | BLi03953 | -242 | -0.8 | AACTTAATTAA-(10)-AAATTAACTAA |
| Bacillus pumilus SAFR-032 | BPUM_3348 | -209 | 0.5 | AAATTAAATAA-(10)-AAATTATCTAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37050 | -156 | -1 | AATTTAAATAA-(10)-AAATTAAGTAA |
|
Position: -340
Score: 5.3 Sequence: TTAAGCATCTT-(10)-GTGTTTTTTTT
Position: -335
Score: 5.4 Sequence: CATCTTTCATT-(5)-GTGTTTTTTTT
Position: -268
Score: 6.1 Sequence: TTACTAAGGTT-(6)-TTACTGTATTG
Position: -265
Score: 5.5 Sequence: CTAAGGTTGTA-(3)-TTACTGTATTG
Position: -251
Score: 5.9 Sequence: TTACTGTATTG-(10)-TTTGTGTGATT
Position: -230
Score: 5.4 Sequence: TTTGTGTGATT-(5)-TTAAATAAATG
Position: -52
Score: 5.7 Sequence: ATAATTATCTT-(10)-CAAATTTATAT
Position: -51
Score: 5.4 Sequence: TAATTATCTTT-(13)-TTTATATGATT
Position: -49
Score: 5.2 Sequence: ATTATCTTTCT-(11)-TTTATATGATT
Position: -48
Score: 5.9 Sequence: TTATCTTTCTA-(10)-TTTATATGATT
Position: -32
Score: 5.6 Sequence: GCAAATTTATA-(3)-TTGATTCTAAT
Position: -31
Score: 5.6 Sequence: CAAATTTATAT-(2)-TTGATTCTAAT
Position: -27
Score: 5.5 Sequence: TTTATATGATT-(4)-CTAATCTAAAC
Position: 22
Score: 5.9 Sequence: TTAGTCAAATC-(4)-TTATTTTAACC
Locus tag: BMQ_2642
|
||||
| BMQ_2642 | -340 | 5.3 | TTAAGCATCTT-(10)-GTGTTTTTTTT | |
| -335 | 5.4 | CATCTTTCATT-(5)-GTGTTTTTTTT | ||
| -268 | 6.1 | TTACTAAGGTT-(6)-TTACTGTATTG | ||
| -265 | 5.5 | CTAAGGTTGTA-(3)-TTACTGTATTG | ||
| -251 | 5.9 | TTACTGTATTG-(10)-TTTGTGTGATT | ||
| -230 | 5.4 | TTTGTGTGATT-(5)-TTAAATAAATG | ||
| -52 | 5.7 | ATAATTATCTT-(10)-CAAATTTATAT | ||
| -51 | 5.4 | TAATTATCTTT-(13)-TTTATATGATT | ||
| -49 | 5.2 | ATTATCTTTCT-(11)-TTTATATGATT | ||
| -48 | 5.9 | TTATCTTTCTA-(10)-TTTATATGATT | ||
| -32 | 5.6 | GCAAATTTATA-(3)-TTGATTCTAAT | ||
| -31 | 5.6 | CAAATTTATAT-(2)-TTGATTCTAAT | ||
| -27 | 5.5 | TTTATATGATT-(4)-CTAATCTAAAC | ||
| 22 | 5.9 | TTAGTCAAATC-(4)-TTATTTTAACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywkB | ||||
| Ortholog function: Malate permease | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034200 | -206 | -0.8 | AACTTAAAAAA-(10)-AAATTAAGTAA |
| Bacillus licheniformis DSM 13 | BLi03952 | -242 | -0.8 | AACTTAATTAA-(10)-AAATTAACTAA |
| Bacillus pumilus SAFR-032 | BPUM_3347 | -209 | 0.5 | AAATTAAATAA-(10)-AAATTATCTAA |
|
Position: -248
Score: 6.1 Sequence: TAAAACTAATT-(9)-TTAACTATGTT
Position: -246
Score: 5.4 Sequence: AAACTAATTTT-(7)-TTAACTATGTT
Position: -243
Score: 6.9 Sequence: CTAATTTTTCT-(4)-TTAACTATGTT
Position: -242
Score: 6.6 Sequence: TAATTTTTCTT-(3)-TTAACTATGTT
Position: -146
Score: 6 Sequence: TTAATTATATG-(12)-CTTCTTCGTTT
Position: -73
Score: 5.2 Sequence: ATAATGATATC-(12)-AAAATATTGTT
Position: -50
Score: 6.2 Sequence: AAAATATTGTT-(5)-TTACATTCTTT
Position: -48
Score: 5.7 Sequence: AATATTGTTTT-(3)-TTACATTCTTT
Position: -47
Score: 6.6 Sequence: ATATTGTTTTT-(2)-TTACATTCTTT
Position: -46
Score: 5.1 Sequence: TATTGTTTTTT-(2)-TACATTCTTTT
Position: -45
Score: 5.5 Sequence: ATTGTTTTTTT-(5)-TTCTTTTAAGA
Position: -44
Score: 6.2 Sequence: TTGTTTTTTTT-(4)-TTCTTTTAAGA
Position: -43
Score: 5.5 Sequence: TGTTTTTTTTT-(3)-TTCTTTTAAGA
Locus tag: BMQ_3748
|
||||
| BMQ_3748 | -248 | 6.1 | TAAAACTAATT-(9)-TTAACTATGTT | |
| -246 | 5.4 | AAACTAATTTT-(7)-TTAACTATGTT | ||
| -243 | 6.9 | CTAATTTTTCT-(4)-TTAACTATGTT | ||
| -242 | 6.6 | TAATTTTTCTT-(3)-TTAACTATGTT | ||
| -146 | 6 | TTAATTATATG-(12)-CTTCTTCGTTT | ||
| -73 | 5.2 | ATAATGATATC-(12)-AAAATATTGTT | ||
| -50 | 6.2 | AAAATATTGTT-(5)-TTACATTCTTT | ||
| -48 | 5.7 | AATATTGTTTT-(3)-TTACATTCTTT | ||
| -47 | 6.6 | ATATTGTTTTT-(2)-TTACATTCTTT | ||
| -46 | 5.1 | TATTGTTTTTT-(2)-TACATTCTTTT | ||
| -45 | 5.5 | ATTGTTTTTTT-(5)-TTCTTTTAAGA | ||
| -44 | 6.2 | TTGTTTTTTTT-(4)-TTCTTTTAAGA | ||
| -43 | 5.5 | TGTTTTTTTTT-(3)-TTCTTTTAAGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywkA | ||||
| Ortholog function: NAD-dependent malate dehydrogenase (EC 1.1.1.38) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034210 | -206 | -0.8 | AACTTAAAAAA-(10)-AAATTAAGTAA |
| Bacillus licheniformis DSM 13 | BLi03953 | -242 | -0.8 | AACTTAATTAA-(10)-AAATTAACTAA |
| Bacillus pumilus SAFR-032 | BPUM_3348 | -209 | 0.5 | AAATTAAATAA-(10)-AAATTATCTAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37050 | -156 | -1 | AATTTAAATAA-(10)-AAATTAAGTAA |
|
Position: -251
Score: 5.3 Sequence: TGCAGTTTATT-(5)-TTGATAAAATA
Position: -250
Score: 5.1 Sequence: GCAGTTTATTT-(4)-TTGATAAAATA
Position: -181
Score: 5.3 Sequence: TAAATATTGTC-(10)-ATAAAATAATA
Position: -102
Score: 6.4 Sequence: AAACGTATTTT-(5)-TTATTTTATTT
Position: -98
Score: 6.4 Sequence: GTATTTTTACA-(6)-TTATTTTAAAT
Position: -95
Score: 5.9 Sequence: TTTTTACAATT-(3)-TTATTTTAAAT
Locus tag: BMQ_5242
|
||||
| BMQ_5242 | -251 | 5.3 | TGCAGTTTATT-(5)-TTGATAAAATA | |
| -250 | 5.1 | GCAGTTTATTT-(4)-TTGATAAAATA | ||
| -181 | 5.3 | TAAATATTGTC-(10)-ATAAAATAATA | ||
| -102 | 6.4 | AAACGTATTTT-(5)-TTATTTTATTT | ||
| -98 | 6.4 | GTATTTTTACA-(6)-TTATTTTAAAT | ||
| -95 | 5.9 | TTTTTACAATT-(3)-TTATTTTAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yflS | ||||
| Ortholog function: Putative malate transporter | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007730 | -89 | 5.2 | TTTTTTAATTA-(9)-TTTATTAACTT |
| Bacillus halodurans C-125 | BH3327 | -63 | 7.4 | TTGCTCTTTTA-(6)-CTACTTTTTTT |
| -46 | 7.7 | CTACTTTTTTT-(6)-TTAGGTTAATC | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU07570 | -91 | 5.2 | TTTTTTAATTA-(9)-TTTATTAACTT |