Propagation of CcpA regulog to Bacillus coahuilensis m4-4
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus coahuilensis m4-4 |
| Orthologous TF(s) | Bcoam_010100015411, Bcoam_010100015416, Bcoam_010100015421 |
| Regulated genes | 18 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -65
Score: 4.3 Sequence: ATGTAAGTGCTTTCGT
Position: -32
Score: 5 Sequence: ATGAAAGCACTTTCAA
Locus tag: Bcoam_010100005090
|
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| Bcoam_010100005090 | -65 | 4.3 | ATGTAAGTGCTTTCGT | |
| -32 | 5 | ATGAAAGCACTTTCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmX | ||||
| Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2303 | -30 | 4.4 | ATGAAATCGATTACAT |
| Bacillus clausii KSM-K16 | ABC1514 | -48 | 4.6 | ATGAAAGGGGTTACAA |
| Bacillus halodurans C-125 | BH1140 | -47 | 4.6 | TTGTAAGCGCTACAAT |
| Bacillus licheniformis DSM 13 | BLi01052 | -34 | 4.6 | GTTAAAGCGCTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_0922 | -41 | 4.1 | AGTGAAGCGCTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB1134 | -37 | 4.1 | ATGTAATCGTTAACAC |
|
Position: -94
Score: 4.7 Sequence: ATGAAAGCGTTACAAA
Locus tag: Bcoam_010100005750
|
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| Bcoam_010100005750 | -94 | 4.7 | ATGAAAGCGTTACAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cycB | ||||
| Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein | ||||
| Bacillus clausii KSM-K16 | ABC3520 | -37 | 4.6 | AAGAAAGCGGTTACTT |
| Bacillus halodurans C-125 | BH2019 | -55 | 4.4 | TATAAAACGCTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3613 | -51 | 4.8 | AAGAAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34160 | -39 | 5 | TTTAAAGCGCTTTCAT |
|
Position: -99
Score: 5.3 Sequence: TTGAAAACGCTATCAA
Locus tag: Bcoam_010100006800
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| Bcoam_010100006800 | -99 | 5.3 | TTGAAAACGCTATCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ylbP | ||||
| Ortholog function: Uncharacterized N-acetyltransferase (EC 2.3.1.-) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_014960 | -46 | 4.9 | ATTAAAGCGTTTACAA |
| Bacillus clausii KSM-K16 | ABC2369 | -70 | 4.2 | TTTAATGCGTTTTCAT |
| Bacillus licheniformis DSM 13 | BLi01727 | -48 | 4.5 | AAAAAAGCGTTTACAA |
| Bacillus pumilus SAFR-032 | BPUM_1403 | -58 | 4.8 | ATGAAAACGCCTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU15100 | -48 | 4.4 | AATAAAGCGTTTACAA |
| Oceanobacillus iheyensis HTE831 | OB1458 | -59 | 4.3 | TAGGAAGCGTTATCTT |
|
Position: -78
Score: 5.1 Sequence: TTGATAGCGTTTTCAA
Locus tag: Bcoam_010100006805
|
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| Bcoam_010100006805 | -78 | 5.1 | TTGATAGCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yngH | ||||
| Ortholog function: Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_018370 | -44 | 5.2 | ATGAAAACGTTTACTA |
| Bacillus clausii KSM-K16 | ABC1507 | -77 | 4.6 | TTGGTAACGCTTTCAT |
| Bacillus halodurans C-125 | BH1132 | -251 | 4.6 | AAGAAACCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi02143 | -35 | 5.3 | ATGAAAACGCTTTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1784 | -35 | 4.8 | ATGTAAACGCTTACCA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU18240 | -41 | 4.8 | ATGTAAACGCTTTCCT |
|
Position: -152
Score: 4.7 Sequence: ATGAAAGCGGATACAG
Position: -49
Score: 4.8 Sequence: ATGAAAGCGCAGTCTA
Locus tag: Bcoam_010100008590
|
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| Bcoam_010100008590 | -152 | 4.7 | ATGAAAGCGGATACAG | |
| -49 | 4.8 | ATGAAAGCGCAGTCTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sucC | ||||
| Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_015920 | -52 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus licheniformis DSM 13 | BLi01829 | -53 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1507 | -57 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU16090 | -51 | 4.8 | ATGAAAGCGCAGTCTA |
| Geobacillus kaustophilus HTA426 | GK1208 | -47 | 4.2 | ATGAAAGCGCTAAGAC |
|
Position: -154
Score: 5 Sequence: TTGAAAGCGGTTTAAT
Locus tag: Bcoam_010100011080
|
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| Bcoam_010100011080 | -154 | 5 | TTGAAAGCGGTTTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: drm | ||||
| Ortholog function: Phosphopentomutase (EC 5.4.2.7) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0998 | -114 | 4.9 | ATGAAAACGTTTTATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_021610 | -74 | 4.5 | ATGTAAACGGTTTATA |
| Bacillus cereus ATCC 14579 | BC4087 | -222 | 4.5 | AAGAAAGCGTAAACAT |
| Bacillus licheniformis DSM 13 | BLi02500 | -99 | 4.1 | GTGTAAACGGTTTATA |
| Bacillus pumilus SAFR-032 | BPUM_2081 | -82 | 4.5 | TTGTAAACGGTTTATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU23500 | -77 | 4.7 | ATGAAAACGGTTTATA |
|
Position: -346
Score: 4.7 Sequence: TTGAAAACGCTTTACT
Locus tag: Bcoam_010100015461
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| Bcoam_010100015461 | -346 | 4.7 | TTGAAAACGCTTTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0461 | -70 | 4.7 | ATGAAAACGATTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026810 | -72 | 4.9 | TTGAAAACGCTTTATA |
| Bacillus licheniformis DSM 13 | BLi03120 | -69 | 4.9 | ATGAAAACGCTTAATA |
| Bacillus pumilus SAFR-032 | BPUM_2617 | -74 | 4.4 | GTGAAACCGTTTTAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29690 | -75 | 4.9 | TTGAAAACGCTTTATA |
|
Position: -138
Score: 4.4 Sequence: AGTAAAGCGTTTTCAA
Position: 6
Score: 4.8 Sequence: TTGGAAGCGTTACCAA
Locus tag: Bcoam_010100015466
|
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| Bcoam_010100015466 | -138 | 4.4 | AGTAAAGCGTTTTCAA | |
| 6 | 4.8 | TTGGAAGCGTTACCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0462 | 237 | 4.9 | ATGAAAGAGTTTTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_026800 | -102 | 4.5 | TATAAAGCGTTTTCAA |
| Bacillus clausii KSM-K16 | ABC2760 | -65 | 4.7 | TTGAAAACGTTACCTT |
| 0 | 4.8 | ATGAAAGCGCTTCCTG | ||
| Bacillus halodurans C-125 | BH3234 | 6 | 4.4 | TTGCAAGCGCTTCCAG |
| Bacillus licheniformis DSM 13 | BLi03119 | 6 | 4.7 | TTGAAAGCGCTGCCAG |
| Bacillus pumilus SAFR-032 | BPUM_2616 | -30 | 4.7 | TTGTAAACGTATGCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29680 | -101 | 4.5 | TATAAAGCGTTTTCAA |
| 6 | 4.8 | TTGAAAGCGTTACCAG | ||
| Oceanobacillus iheyensis HTE831 | OB0022 | -36 | 4.5 | TTGTAATCGTTTGCAA |
| Paenibacillus sp. JDR-2 | Pjdr2_3796 | -56 | 5 | TTGAAAGCGTATTCTT |
|
Position: -180
Score: 4.4 Sequence: ATGTAACCGGTGTCAT
Locus tag: Bcoam_010100015616
|
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| Bcoam_010100015616 | -180 | 4.4 | ATGTAACCGGTGTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0480 | -133 | 4.4 | AAGAAAACGTTTTCGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026400 | -146 | 4.7 | TTGTAAGCGGTACCAA |
| Bacillus licheniformis DSM 13 | BLi03086 | -168 | 4.9 | GTGAAAGCGTTAACAT |
| Bacillus pumilus SAFR-032 | BPUM_2579 | -180 | 4.7 | ATGTAAGCGGTAACAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29470 | -156 | 5.2 | TTGTAAGCGTTATCAA |
|
Position: -333
Score: 4.4 Sequence: AAGTTAGCGTTTTCAT
Position: -150
Score: 4.5 Sequence: ATGTAAGCGGTGACAG
Locus tag: Bcoam_010100018267
|
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| Bcoam_010100018267 | -333 | 4.4 | AAGTTAGCGTTTTCAT | |
| -150 | 4.5 | ATGTAAGCGGTGACAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007970 | 318 | 4 | GTGAAAACGCTTGCGG |
| Bacillus cereus ATCC 14579 | BC0631 | 234 | 4.4 | TTGATAACGCTTGCAG |
| Bacillus halodurans C-125 | BH2216 | 136 | 4.4 | TTGAAAGCCTTGACAT |
| 318 | 4.4 | GTGAAAACGCTTGCTG | ||
| Bacillus licheniformis DSM 13 | BLi00796 | 318 | 4.6 | GTGAAAACGCTTGCAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07800 | 318 | 4.6 | GTGAAAACGCTTGCAG |
|
Position: 0
Score: 4 Sequence: ATGAAAGAGGTAAAAT
Locus tag: Bcoam_010100018277
|
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| Bcoam_010100018277 | 0 | 4 | ATGAAAGAGGTAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treR | ||||
| Ortholog function: Transcriptional repressor of trehalose operon, GntR family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007990 | 318 | 4 | GTGAAAACGCTTGCGG |
| Bacillus licheniformis DSM 13 | BLi00798 | 318 | 4.6 | GTGAAAACGCTTGCAG |
| Bacillus pumilus SAFR-032 | BPUM_0730 | 318 | 4 | GTGAAAACGCTTGCGG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07820 | 318 | 4.6 | GTGAAAACGCTTGCAG |
|
Position: -88
Score: 4.7 Sequence: TTGTAAACGGATACAA
Locus tag: Bcoam_010100020509
|
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| Bcoam_010100020509 | -88 | 4.7 | TTGTAAACGGATACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pta | ||||
| Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034850 | -99 | 5 | TTGAAAGCGCTATAAT |
| Bacillus clausii KSM-K16 | ABC3910 | -143 | 4.3 | TTGAAAACCCTTTCCT |
| -124 | 4.5 | ATGGAAGCGTAATCTA | ||
| Bacillus halodurans C-125 | BH3823 | -194 | 4.8 | TTGGAAACGCTTTAAA |
| Bacillus licheniformis DSM 13 | BLi03997 | -104 | 4.3 | GTGTAAACGTTATAAT |
| Bacillus pumilus SAFR-032 | BPUM_3415 | -100 | 4.9 | TTGTAAGCGCTATAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37660 | -100 | 5 | ATGAAAGCGCTATAAT |
| -38 | 4 | AAGAAAGCGTTTTTGT | ||
|
Position: -39
Score: 5 Sequence: TTGAAAGCGTTTACGA
Locus tag: Bcoam_010100020719
|
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| Bcoam_010100020719 | -39 | 5 | TTGAAAGCGTTTACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgA | ||||
| Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2739 | -16 | 4.7 | TTGAAAGGGCTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022450 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus halodurans C-125 | BH3801 | -65 | 5 | ATGTAAGCGCTTAAAT |
| Bacillus pumilus SAFR-032 | BPUM_3373 | -32 | 4.9 | ATGTAAGCGGTAACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24170 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Geobacillus kaustophilus HTA426 | GK3397 | -40 | 4.6 | TTGTAATCGCTTTCTT |