Propagation of CcpA regulog to Bacillus coahuilensis m4-4

Reference regulog properties
Source regulog:	CcpA - Bacillales
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Carbon catabolism
Effector:	HPr, phosphocarrier protein
Phylum:	Firmicutes
Propagated regulon:
Target genome	Bacillus coahuilensis m4-4
Orthologous TF(s)	Bcoam_010100015411, Bcoam_010100015416, Bcoam_010100015421
Regulated genes	18

Built upon 559 sites [see more]

Predicted regulatory interactions in *Bacillus coahuilensis m4-4*
	Locus tag	Position	Score	Sequence
Position: -65 Score: 4.3 Sequence: ATGTAAGTGCTTTCGT Position: -32 Score: 5 Sequence: ATGAAAGCACTTTCAA Locus tag: Bcoam_010100005090
	Bcoam_010100005090	-65	4.3	ATGTAAGTGCTTTCGT
		-32	5	ATGAAAGCACTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: msmX
Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19)
Anoxybacillus flavithermus WK1	Aflv_2303	-30	4.4	ATGAAATCGATTACAT
Bacillus clausii KSM-K16	ABC1514	-48	4.6	ATGAAAGGGGTTACAA
Bacillus halodurans C-125	BH1140	-47	4.6	TTGTAAGCGCTACAAT
Bacillus licheniformis DSM 13	BLi01052	-34	4.6	GTTAAAGCGCTTACAT
Bacillus pumilus SAFR-032	BPUM_0922	-41	4.1	AGTGAAGCGCTTTCAA
Oceanobacillus iheyensis HTE831	OB1134	-37	4.1	ATGTAATCGTTAACAC

Position: -94 Score: 4.7 Sequence: ATGAAAGCGTTACAAA Locus tag: Bcoam_010100005750
	Bcoam_010100005750	-94	4.7	ATGAAAGCGTTACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycB
Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein
Bacillus clausii KSM-K16	ABC3520	-37	4.6	AAGAAAGCGGTTACTT
Bacillus halodurans C-125	BH2019	-55	4.4	TATAAAACGCTTTCAT
Bacillus pumilus SAFR-032	BPUM_3613	-51	4.8	AAGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168	BSU34160	-39	5	TTTAAAGCGCTTTCAT

Position: -99 Score: 5.3 Sequence: TTGAAAACGCTATCAA Locus tag: Bcoam_010100006800
	Bcoam_010100006800	-99	5.3	TTGAAAACGCTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ylbP
Ortholog function: Uncharacterized N-acetyltransferase (EC 2.3.1.-)
Bacillus amyloliquefaciens FZB42	RBAM_014960	-46	4.9	ATTAAAGCGTTTACAA
Bacillus clausii KSM-K16	ABC2369	-70	4.2	TTTAATGCGTTTTCAT
Bacillus licheniformis DSM 13	BLi01727	-48	4.5	AAAAAAGCGTTTACAA
Bacillus pumilus SAFR-032	BPUM_1403	-58	4.8	ATGAAAACGCCTTCAA
Bacillus subtilis subsp. subtilis str. 168	BSU15100	-48	4.4	AATAAAGCGTTTACAA
Oceanobacillus iheyensis HTE831	OB1458	-59	4.3	TAGGAAGCGTTATCTT

Position: -78 Score: 5.1 Sequence: TTGATAGCGTTTTCAA Locus tag: Bcoam_010100006805
	Bcoam_010100006805	-78	5.1	TTGATAGCGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yngH
Ortholog function: Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14)
Bacillus amyloliquefaciens FZB42	RBAM_018370	-44	5.2	ATGAAAACGTTTACTA
Bacillus clausii KSM-K16	ABC1507	-77	4.6	TTGGTAACGCTTTCAT
Bacillus halodurans C-125	BH1132	-251	4.6	AAGAAACCGTTTACAA
Bacillus licheniformis DSM 13	BLi02143	-35	5.3	ATGAAAACGCTTTCTA
Bacillus pumilus SAFR-032	BPUM_1784	-35	4.8	ATGTAAACGCTTACCA
Bacillus subtilis subsp. subtilis str. 168	BSU18240	-41	4.8	ATGTAAACGCTTTCCT

Position: -152 Score: 4.7 Sequence: ATGAAAGCGGATACAG Position: -49 Score: 4.8 Sequence: ATGAAAGCGCAGTCTA Locus tag: Bcoam_010100008590
	Bcoam_010100008590	-152	4.7	ATGAAAGCGGATACAG
		-49	4.8	ATGAAAGCGCAGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sucC
Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Bacillus amyloliquefaciens FZB42	RBAM_015920	-52	4.8	ATGAAAGCGCAGTCTA
Bacillus licheniformis DSM 13	BLi01829	-53	4.8	ATGAAAGCGCAGTCTA
Bacillus pumilus SAFR-032	BPUM_1507	-57	4.8	ATGAAAGCGCAGTCTA
Bacillus subtilis subsp. subtilis str. 168	BSU16090	-51	4.8	ATGAAAGCGCAGTCTA
Geobacillus kaustophilus HTA426	GK1208	-47	4.2	ATGAAAGCGCTAAGAC

Position: -154 Score: 5 Sequence: TTGAAAGCGGTTTAAT Locus tag: Bcoam_010100011080
	Bcoam_010100011080	-154	5	TTGAAAGCGGTTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drm
Ortholog function: Phosphopentomutase (EC 5.4.2.7)
Anoxybacillus flavithermus WK1	Aflv_0998	-114	4.9	ATGAAAACGTTTTATA
Bacillus amyloliquefaciens FZB42	RBAM_021610	-74	4.5	ATGTAAACGGTTTATA
Bacillus cereus ATCC 14579	BC4087	-222	4.5	AAGAAAGCGTAAACAT
Bacillus licheniformis DSM 13	BLi02500	-99	4.1	GTGTAAACGGTTTATA
Bacillus pumilus SAFR-032	BPUM_2081	-82	4.5	TTGTAAACGGTTTATA
Bacillus subtilis subsp. subtilis str. 168	BSU23500	-77	4.7	ATGAAAACGGTTTATA

Position: -346 Score: 4.7 Sequence: TTGAAAACGCTTTACT Locus tag: Bcoam_010100015461
	Bcoam_010100015461	-346	4.7	TTGAAAACGCTTTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Anoxybacillus flavithermus WK1	Aflv_0461	-70	4.7	ATGAAAACGATTTAAT
Bacillus amyloliquefaciens FZB42	RBAM_026810	-72	4.9	TTGAAAACGCTTTATA
Bacillus licheniformis DSM 13	BLi03120	-69	4.9	ATGAAAACGCTTAATA
Bacillus pumilus SAFR-032	BPUM_2617	-74	4.4	GTGAAACCGTTTTAAT
Bacillus subtilis subsp. subtilis str. 168	BSU29690	-75	4.9	TTGAAAACGCTTTATA

Position: -138 Score: 4.4 Sequence: AGTAAAGCGTTTTCAA Position: 6 Score: 4.8 Sequence: TTGGAAGCGTTACCAA Locus tag: Bcoam_010100015466
	Bcoam_010100015466	-138	4.4	AGTAAAGCGTTTTCAA
		6	4.8	TTGGAAGCGTTACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Anoxybacillus flavithermus WK1	Aflv_0462	237	4.9	ATGAAAGAGTTTTCAA
Bacillus amyloliquefaciens FZB42	RBAM_026800	-102	4.5	TATAAAGCGTTTTCAA
Bacillus clausii KSM-K16	ABC2760	-65	4.7	TTGAAAACGTTACCTT
		0	4.8	ATGAAAGCGCTTCCTG
Bacillus halodurans C-125	BH3234	6	4.4	TTGCAAGCGCTTCCAG
Bacillus licheniformis DSM 13	BLi03119	6	4.7	TTGAAAGCGCTGCCAG
Bacillus pumilus SAFR-032	BPUM_2616	-30	4.7	TTGTAAACGTATGCAA
Bacillus subtilis subsp. subtilis str. 168	BSU29680	-101	4.5	TATAAAGCGTTTTCAA
		6	4.8	TTGAAAGCGTTACCAG
Oceanobacillus iheyensis HTE831	OB0022	-36	4.5	TTGTAATCGTTTGCAA
Paenibacillus sp. JDR-2	Pjdr2_3796	-56	5	TTGAAAGCGTATTCTT

Position: -180 Score: 4.4 Sequence: ATGTAACCGGTGTCAT Locus tag: Bcoam_010100015616
	Bcoam_010100015616	-180	4.4	ATGTAACCGGTGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Anoxybacillus flavithermus WK1	Aflv_0480	-133	4.4	AAGAAAACGTTTTCGT
Bacillus amyloliquefaciens FZB42	RBAM_026400	-146	4.7	TTGTAAGCGGTACCAA
Bacillus licheniformis DSM 13	BLi03086	-168	4.9	GTGAAAGCGTTAACAT
Bacillus pumilus SAFR-032	BPUM_2579	-180	4.7	ATGTAAGCGGTAACAG
Bacillus subtilis subsp. subtilis str. 168	BSU29470	-156	5.2	TTGTAAGCGTTATCAA

Position: -333 Score: 4.4 Sequence: AAGTTAGCGTTTTCAT Position: -150 Score: 4.5 Sequence: ATGTAAGCGGTGACAG Locus tag: Bcoam_010100018267
	Bcoam_010100018267	-333	4.4	AAGTTAGCGTTTTCAT
		-150	4.5	ATGTAAGCGGTGACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42	RBAM_007970	318	4	GTGAAAACGCTTGCGG
Bacillus cereus ATCC 14579	BC0631	234	4.4	TTGATAACGCTTGCAG
Bacillus halodurans C-125	BH2216	136	4.4	TTGAAAGCCTTGACAT
		318	4.4	GTGAAAACGCTTGCTG
Bacillus licheniformis DSM 13	BLi00796	318	4.6	GTGAAAACGCTTGCAG
Bacillus subtilis subsp. subtilis str. 168	BSU07800	318	4.6	GTGAAAACGCTTGCAG

Position: 0 Score: 4 Sequence: ATGAAAGAGGTAAAAT Locus tag: Bcoam_010100018277
	Bcoam_010100018277	0	4	ATGAAAGAGGTAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treR
Ortholog function: Transcriptional repressor of trehalose operon, GntR family
Bacillus amyloliquefaciens FZB42	RBAM_007990	318	4	GTGAAAACGCTTGCGG
Bacillus licheniformis DSM 13	BLi00798	318	4.6	GTGAAAACGCTTGCAG
Bacillus pumilus SAFR-032	BPUM_0730	318	4	GTGAAAACGCTTGCGG
Bacillus subtilis subsp. subtilis str. 168	BSU07820	318	4.6	GTGAAAACGCTTGCAG

Position: -88 Score: 4.7 Sequence: TTGTAAACGGATACAA Locus tag: Bcoam_010100020509
	Bcoam_010100020509	-88	4.7	TTGTAAACGGATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pta
Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8)
Bacillus amyloliquefaciens FZB42	RBAM_034850	-99	5	TTGAAAGCGCTATAAT
Bacillus clausii KSM-K16	ABC3910	-143	4.3	TTGAAAACCCTTTCCT
		-124	4.5	ATGGAAGCGTAATCTA
Bacillus halodurans C-125	BH3823	-194	4.8	TTGGAAACGCTTTAAA
Bacillus licheniformis DSM 13	BLi03997	-104	4.3	GTGTAAACGTTATAAT
Bacillus pumilus SAFR-032	BPUM_3415	-100	4.9	TTGTAAGCGCTATAAT
Bacillus subtilis subsp. subtilis str. 168	BSU37660	-100	5	ATGAAAGCGCTATAAT
		-38	4	AAGAAAGCGTTTTTGT

Position: -39 Score: 5 Sequence: TTGAAAGCGTTTACGA Locus tag: Bcoam_010100020719
	Bcoam_010100020719	-39	5	TTGAAAGCGTTTACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mmgA
Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
Anoxybacillus flavithermus WK1	Aflv_2739	-16	4.7	TTGAAAGGGCTTTCTT
Bacillus amyloliquefaciens FZB42	RBAM_022450	-43	4.6	GTGTAAGCGTTATCTT
Bacillus halodurans C-125	BH3801	-65	5	ATGTAAGCGCTTAAAT
Bacillus pumilus SAFR-032	BPUM_3373	-32	4.9	ATGTAAGCGGTAACAA
Bacillus subtilis subsp. subtilis str. 168	BSU24170	-37	4.9	TTGTAAGCGCTGTCTA
Geobacillus kaustophilus HTA426	GK3397	-40	4.6	TTGTAATCGCTTTCTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CcpA regulog to Bacillus coahuilensis m4-4

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --