Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SiaR regulog to Edwardsiella tarda EIB202

Reference regulog properties
Source regulog: SiaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Sialic acid utilization
Effector: Glucosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella tarda EIB202
Orthologous TF(s) ETAE_0929
Regulated genes 3
Built upon 14 sites [see more]
Predicted regulatory interactions in Edwardsiella tarda EIB202
Locus tag Position Score Sequence
Position: -70
Score: 5.1
Sequence: GATGGAGTATTGCTCCATA
Locus tag: ETAE_0521
ETAE_0521 -70 5.1 GATGGAGTATTGCTCCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanE
Ortholog function: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Salmonella typhimurium LT2 STM1129 -37 4.9 AACGGAGCAAAACTTCAAA
Yersinia pestis KIM y1459 -46 5.9 AATGGAGTTAAACTTCATT
Edwardsiella tarda EIB202 ETAE_0521 -70 5.1 GATGGAGTATTGCTCCATA
-40 4.3 TATGGAGTTCAATTCTAAA
Proteus mirabilis HI4320 PMI2978 -71 4.5 TGAGAAATAAAACTCCGTA
-41 4.5 TTCGGAGTTACATTTCAAA
Position: -61
Score: 5
Sequence: AATGGAGCCAAACTCCATA
Locus tag: ETAE_0928
ETAE_0928 -61 5 AATGGAGCCAAACTCCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3)
Yersinia pestis KIM y1458 -46 5.9 AATGGAGTTAAACTTCATT
Edwardsiella tarda EIB202 ETAE_0928 -61 5 AATGGAGCCAAACTCCATA
Proteus mirabilis HI4320 PMI2973 -59 5.4 TATAGAGTTAAACTCCATA
-29 4.8 AAAGAAATTAATCTCCATA
Position: -128
Score: 5.2
Sequence: ATTGAAGTGTAACTCCAAA
Locus tag: ETAE_0932
ETAE_0932 -128 5.2 ATTGAAGTGTAACTCCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanM
Ortholog function: Sialic acid-induced transmembrane protein YjhT(NanM), possible mutarotase
Salmonella typhimurium LT2 STM1130 -32 5 GATGAAGCTTTACTCCAAT
Edwardsiella tarda EIB202 ETAE_0932 -128 5.2 ATTGAAGTGTAACTCCAAA
-98 4.5 AATGGAGCAATACTACAAC