Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ExuR regulog to Edwardsiella tarda EIB202

Reference regulog properties
Source regulog: ExuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Galacturonate utilization
Effector: Galacturonate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella tarda EIB202
Orthologous TF(s) ETAE_0434
Regulated genes 4
Built upon 48 sites [see more]
Predicted regulatory interactions in Edwardsiella tarda EIB202
Locus tag Position Score Sequence
Position: -68
Score: 5.8
Sequence: AAAGTGGTATAACAACTCG
Locus tag: ETAE_0434
ETAE_0434 -68 5.8 AAAGTGGTATAACAACTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuR
Ortholog function: D-galacturonate transcriptional repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b3094 -47 6 AAAGTGGTATAACAAATAT
Citrobacter koseri ATCC BAA-895 CKO_04496 -47 6 AAAGTGGTATAACAAATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03522 -48 5.8 AAAGTGGTATAACAAATCG
Enterobacter sp. 638 Ent638_3548 -45 6.1 AAAGTGGTATAACAAATCA
Yersinia pestis KIM y3602 -105 5.8 TAAGTGGTATAACAAATCC
Serratia proteamaculans 568 Spro_4323 -57 5.8 TAAGTGGTATAACAAATCC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0643 -98 5.9 TAAGTGGTATAACAAATCA
Edwardsiella tarda EIB202 ETAE_0434 -68 5.8 AAAGTGGTATAACAACTCG
Position: -282
Score: 5.2
Sequence: GAATCTGTATGACAAGTTA
Locus tag: ETAE_0435
ETAE_0435 -282 5.2 GAATCTGTATGACAAGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuT
Ortholog function: Hexuronate transporter
Escherichia coli str. K-12 substr. MG1655 b3093 -129 6.2 AAAGTTGTATGACAAGTTA
Citrobacter koseri ATCC BAA-895 CKO_04495 -227 5.7 GAAGTTGTATGACAAGTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03521 -240 6.2 AAAGTTGTATGACAAGTTA
Enterobacter sp. 638 Ent638_3547 -116 6.2 AAAGTTGTATGACAAGTTA
Yersinia pestis KIM y3601 -515 5.6 AAAtctGTATGACAAgTTa
Serratia proteamaculans 568 Spro_4322 -157 5.6 AAATCTGTATGACAAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0644 -185 6.2 AAAGTTGTATGACAAATTA
Edwardsiella tarda EIB202 ETAE_0435 -282 5.2 GAATCTGTATGACAAGTTA
Position: -69
Score: 6.1
Sequence: AAATTGGTGTGATAACTTC
Locus tag: ETAE_0436
ETAE_0436 -69 6.1 AAATTGGTGTGATAACTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxaC
Ortholog function: Uronate isomerase (EC 5.3.1.12)
Edwardsiella tarda EIB202 ETAE_0436 -69 6.1 AAATTGGTGTGATAACTTC
Position: -101
Score: 4.7
Sequence: GATTTGGTATGACAGATTA
Locus tag: ETAE_2289
ETAE_2289 -101 4.7 GATTTGGTATGACAGATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Citrobacter koseri ATCC BAA-895 CKO_00609 -31 5.3 AATTTGGTATAACAACTTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02604 -34 5.5 TTATTGGTATAACAACTTT
Enterobacter sp. 638 Ent638_2767 -32 5.7 ATATTGGTATAACAACTTT
Yersinia pestis KIM y2902 -240 5.2 AAATCGGTATAACAACATT
Serratia proteamaculans 568 Spro_3238 -80 5 AATTTGGTATAACAAGATT
Edwardsiella tarda EIB202 ETAE_2289 -101 4.7 GATTTGGTATGACAGATTA
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