Propagation of ExuR regulog to Edwardsiella tarda EIB202
| Source regulog: | ExuR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization |
| Effector: | Galacturonate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Edwardsiella tarda EIB202 |
| Orthologous TF(s) | ETAE_0434 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -68
Score: 5.8 Sequence: AAAGTGGTATAACAACTCG
Locus tag: ETAE_0434
|
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| ETAE_0434 | -68 | 5.8 | AAAGTGGTATAACAACTCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuR | ||||
| Ortholog function: D-galacturonate transcriptional repressor, GntR family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3094 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04496 | -47 | 6 | AAAGTGGTATAACAAATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03522 | -48 | 5.8 | AAAGTGGTATAACAAATCG |
| Enterobacter sp. 638 | Ent638_3548 | -45 | 6.1 | AAAGTGGTATAACAAATCA |
| Yersinia pestis KIM | y3602 | -105 | 5.8 | TAAGTGGTATAACAAATCC |
| Serratia proteamaculans 568 | Spro_4323 | -57 | 5.8 | TAAGTGGTATAACAAATCC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0643 | -98 | 5.9 | TAAGTGGTATAACAAATCA |
| Edwardsiella tarda EIB202 | ETAE_0434 | -68 | 5.8 | AAAGTGGTATAACAACTCG |
|
Position: -282
Score: 5.2 Sequence: GAATCTGTATGACAAGTTA
Locus tag: ETAE_0435
|
||||
| ETAE_0435 | -282 | 5.2 | GAATCTGTATGACAAGTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuT | ||||
| Ortholog function: Hexuronate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3093 | -129 | 6.2 | AAAGTTGTATGACAAGTTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04495 | -227 | 5.7 | GAAGTTGTATGACAAGTTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03521 | -240 | 6.2 | AAAGTTGTATGACAAGTTA |
| Enterobacter sp. 638 | Ent638_3547 | -116 | 6.2 | AAAGTTGTATGACAAGTTA |
| Yersinia pestis KIM | y3601 | -515 | 5.6 | AAAtctGTATGACAAgTTa |
| Serratia proteamaculans 568 | Spro_4322 | -157 | 5.6 | AAATCTGTATGACAAGTTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0644 | -185 | 6.2 | AAAGTTGTATGACAAATTA |
| Edwardsiella tarda EIB202 | ETAE_0435 | -282 | 5.2 | GAATCTGTATGACAAGTTA |
|
Position: -69
Score: 6.1 Sequence: AAATTGGTGTGATAACTTC
Locus tag: ETAE_0436
|
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| ETAE_0436 | -69 | 6.1 | AAATTGGTGTGATAACTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Edwardsiella tarda EIB202 | ETAE_0436 | -69 | 6.1 | AAATTGGTGTGATAACTTC |
|
Position: -101
Score: 4.7 Sequence: GATTTGGTATGACAGATTA
Locus tag: ETAE_2289
|
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| ETAE_2289 | -101 | 4.7 | GATTTGGTATGACAGATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuA | ||||
| Ortholog function: Mannonate dehydratase (EC 4.2.1.8) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00609 | -31 | 5.3 | AATTTGGTATAACAACTTG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02604 | -34 | 5.5 | TTATTGGTATAACAACTTT |
| Enterobacter sp. 638 | Ent638_2767 | -32 | 5.7 | ATATTGGTATAACAACTTT |
| Yersinia pestis KIM | y2902 | -240 | 5.2 | AAATCGGTATAACAACATT |
| Serratia proteamaculans 568 | Spro_3238 | -80 | 5 | AATTTGGTATAACAAGATT |
| Edwardsiella tarda EIB202 | ETAE_2289 | -101 | 4.7 | GATTTGGTATGACAGATTA |