Propagation of NikR regulog to Edwardsiella tarda EIB202
| Source regulog: | NikR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | NikR |
| Regulation mode: | repressor |
| Biological process: | Nickel homeostasis |
| Effector: | Nickel ion, (Ni2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Edwardsiella tarda EIB202 |
| Orthologous TF(s) | ETAE_0262 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -59
Score: 7.7 Sequence: GTATGCAGAATTTATAAAATCATCATAC
Locus tag: ETAE_1379
|
||||
| ETAE_1379 | -59 | 7.7 | GTATGCAGAATTTATAAAATCATCATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nikA | ||||
| Ortholog function: nickel ABC transporter, periplasmic nickel-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3476 | -65 | 8 | GTATGACGAATACTTAAAATCGTCATAC |
| Citrobacter koseri ATCC BAA-895 | CKO_04926 | -207 | 8 | GTATGATGAATCTTTAGAATCGTCATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03850 | -52 | 8 | GTATGATGAATCACTAAAATCGTCATAC |
| Enterobacter sp. 638 | Ent638_1834 | -64 | 7.9 | GTATGATGAATTATTAGAATCGTCACAC |
| Edwardsiella tarda EIB202 | ETAE_1379 | -59 | 7.7 | GTATGCAGAATTTATAAAATCATCATAC |
|
Position: -171
Score: 5.3 Sequence: GTATGCAGAAGTAAGGAAAAGTGCATAC
Locus tag: ETAE_1580
|
||||
| ETAE_1580 | -171 | 5.3 | GTATGCAGAAGTAAGGAAAAGTGCATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yntA | ||||
| Ortholog function: predicted nickel ABC transporter, substrate-binding protein | ||||
| Salmonella typhimurium LT2 | STM1255 | -101 | 6.5 | GTATGATGTTTTTAAAAGATCGTCATAC |
| Edwardsiella tarda EIB202 | ETAE_1580 | -171 | 5.3 | GTATGCAGAAGTAAGGAAAAGTGCATAC |
|
Position: -120
Score: 6.9 Sequence: GTATGACAATTTCATGAAAAGATCATAC
Locus tag: ETAE_2654
|
||||
| ETAE_2654 | -120 | 6.9 | GTATGACAATTTCATGAAAAGATCATAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nxiA | ||||
| Ortholog function: high-affinity nickel-transporter | ||||
| Salmonella typhimurium LT2 | STM2783 | -79 | 6.2 | GTGTGACGTTTTAATCAAATGATCATAC |
| Edwardsiella tarda EIB202 | ETAE_2654 | -120 | 6.9 | GTATGACAATTTCATGAAAAGATCATAC |