Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Edwardsiella tarda EIB202

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella tarda EIB202
Orthologous TF(s) ETAE_3299
Regulated genes 141
Built upon 2301 sites [see more]
Predicted regulatory interactions in Edwardsiella tarda EIB202
Locus tag Position Score Sequence
Position: -56
Score: 3.7
Sequence: TTTTGTGGCGCAGATCATTAAA
Locus tag: ETAE_0025
ETAE_0025 -56 3.7 TTTTGTGGCGCAGATCATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uraA1
Ortholog function: Xanthine permease
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04013 -143 3.7 TGATGCGATTTAGCATACAAAA
Enterobacter sp. 638 Ent638_0073 -169 3.7 CAAAATGATTCTTCGCACATAT
Yersinia pestis KIM y0107 -60 4 AAATGTGAGTTAGCAAAAAAAT
Edwardsiella tarda EIB202 ETAE_0025 -56 3.7 TTTTGTGGCGCAGATCATTAAA
Proteus mirabilis HI4320 PMI2868 -54 3.7 TTTTGTGGCGCAGATCATTAAA
Position: -180
Score: 3.8
Sequence: AAAACTAATCTATATCAAATAT
Locus tag: ETAE_0032
ETAE_0032 -180 3.8 AAAACTAATCTATATCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yicG
Ortholog function: Putative inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b3646 -58 4.4 AATCGTGACAATGCGCACAAAT
Salmonella typhimurium LT2 STM3738 -210 3.7 TTAAATTATCTAAGTCAAAATA
-147 3.8 TTTATTGATATTTATAATAAAT
-58 4.9 AATCGTGATACAGCGCACAAAT
Citrobacter koseri ATCC BAA-895 CKO_05103 -58 4.7 AATCGTGATATTACGCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03994 -55 4.9 AATCGTGATCCTGCGCACAAAT
Enterobacter sp. 638 Ent638_0094 -55 3.9 AATCGTGATATGTTCTGCAAAA
Edwardsiella tarda EIB202 ETAE_0032 -180 3.8 AAAACTAATCTATATCAAATAT
Position: -128
Score: 3.7
Sequence: TATTGTTAATGTGTTAATAATT
Locus tag: ETAE_0086
ETAE_0086 -128 3.7 TATTGTTAATGTGTTAATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yifB
Ortholog function: magnesium chelatase family protein
Escherichia coli str. K-12 substr. MG1655 b3765 -266 4.2 TTTTATGATGCGTTTAATAATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04266 -226 4.1 TTATATGAAAAAAATCAAAAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4230 -144 3.9 AATTGCGACCCATTACGCACAA
Edwardsiella tarda EIB202 ETAE_0086 -128 3.7 TATTGTTAATGTGTTAATAATT
Photorhabdus luminescens subsp. laumondii TTO1 plu4686 -268 3.7 TAATTTAATTTAAATTTCAAAA
Position: -205
Score: 4.2
Sequence: AAACGTGATCAATTTAACACCT
Locus tag: ETAE_0118
ETAE_0118 -205 4.2 AAACGTGATCAATTTAACACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemC
Ortholog function: porphobilinogen deaminase
Escherichia coli str. K-12 substr. MG1655 b3805 -236 4.2 AAACGTGATCAATTTAACACCT
Salmonella typhimurium LT2 STM3938 -219 4.2 AAACGTGATCAATTTAACACCT
Citrobacter koseri ATCC BAA-895 CKO_00147 -220 4.2 AAACGTGATCAATTTAACACCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04304 -232 4.2 AAACGTGATCAATTTAACACCT
Enterobacter sp. 638 Ent638_3987 -211 4.2 AAACGTGATCAATCTAACACCT
Serratia proteamaculans 568 Spro_0178 -223 4.2 AAACGTGATCAATCTAACACCT
Edwardsiella tarda EIB202 ETAE_0118 -205 4.2 AAACGTGATCAATTTAACACCT
Position: -119
Score: 4
Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: ETAE_0119
ETAE_0119 -119 4 AGGTGTTAAATTGATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyaA
Ortholog function: Adenylate cyclase (EC 4.6.1.1)
Yersinia pestis KIM y0382 -151 4 AGGTGTTAGATTGATCACGTTT
Serratia proteamaculans 568 Spro_0179 -115 4 AGGTGTTAGATTGATCACGTTT
Edwardsiella tarda EIB202 ETAE_0119 -119 4 AGGTGTTAAATTGATCACGTTT
Position: -142
Score: 3.9
Sequence: AACTGCGAGTAGCATCACAGTT
Locus tag: ETAE_0135
ETAE_0135 -142 3.9 AACTGCGAGTAGCATCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: gluconate kinase 1
Edwardsiella tarda EIB202 ETAE_0135 -142 3.9 AACTGCGAGTAGCATCACAGTT
Position: -148
Score: 4.7
Sequence: TATTGTGAAAATAATCACAGTT
Locus tag: ETAE_0143
ETAE_0143 -148 4.7 TATTGTGAAAATAATCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: udp
Ortholog function: Uridine phosphorylase (EC 2.4.2.3)
Escherichia coli str. K-12 substr. MG1655 b3831 -144 5.2 TTATGTGATTTGCATCACTTTT
-92 4.2 CATGGTGATGAGTATCACGAAA
Salmonella typhimurium LT2 STM3968 -144 5.1 TATTGTGATGAACATCACTTTT
-92 4.1 CATAGTGATGGCTGTCACGAAA
Citrobacter koseri ATCC BAA-895 CKO_00173 -143 5.2 TTATGTGATGTAAATCACTATT
-91 3.9 CATGGTGATGAGCGTCACGAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04327 -143 5.2 TAATGTGATGTGTATCACTATT
-91 4.1 CTTGGTGACTATCATCACAAAA
Enterobacter sp. 638 Ent638_3962 -143 4.7 TAGTGTGATGCATGTCACTATT
Erwinia amylovora ATCC 49946 EAM_0200 -143 4.6 AATTGCGACTTGTATCACCTTT
-90 4 ATTAAGGATGTTCATCACATAA
Yersinia pestis KIM y0444 -149 5.4 ATGTGTGATTTAAATCACAATT
-97 4 CAAGGTGACATAAATCACGAAA
Serratia proteamaculans 568 Spro_0244 -143 5.3 TTTTGTGACTTTAATCACAAAA
-125 3.7 AAAAGTTATGTAGATTGCATTC
-91 4.1 CATAGTGATGGTTGTCACGAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0185 -197 5.1 AAAAGTGATTTAAGTCACATTT
Edwardsiella tarda EIB202 ETAE_0143 -148 4.7 TATTGTGAAAATAATCACAGTT
Proteus mirabilis HI4320 PMI3532 -145 5.1 ATTTGTGATAACTATCACGTTT
-93 3.6 ACAGGTGACGTCAATCACTAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4417 -271 5.2 TTTTGTGATTTATATCTCAAAA
-219 4 TGAAGTGACATTTATCACTAAA
Position: -182
Score: 3.3
Sequence: AAACGTGATTTAACACCTGATT
Locus tag: ETAE_0183
ETAE_0183 -182 3.3 AAACGTGATTTAACACCTGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupA
Ortholog function: DNA-binding protein HU-alpha (HU-2)
Escherichia coli str. K-12 substr. MG1655 b4000 -179 3.4 AAACGTGATTTAACGCCTGATT
Citrobacter koseri ATCC BAA-895 CKO_02986 -179 3.4 AAACGTGATTTAACGCCTGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04382 -179 3.4 AAACGTGATTTACCGCCTGAAT
Enterobacter sp. 638 Ent638_0213 -179 3.5 AAACGTGATTTAACGCCTGTTT
Yersinia pestis KIM y0499 -181 3.4 AAACGTGATTTAACGCCTGATT
Serratia proteamaculans 568 Spro_0290 -181 3.4 AAACGTGATTTAACGCCTCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0238 -197 3.3 AAACGTGATTTAAGGCCTGAAA
Edwardsiella tarda EIB202 ETAE_0183 -182 3.3 AAACGTGATTTAACACCTGATT
Proteus mirabilis HI4320 PMI2771 -183 3.7 AAACGTGATTTAGTGCTTGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0492 -179 3.4 AAACGTGATTTAATGCTTTAAA
Position: -97
Score: 4.4
Sequence: TTACGTGATCGTGCGCGCAAAA
Locus tag: ETAE_0188
ETAE_0188 -97 4.4 TTACGTGATCGTGCGCGCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acs
Ortholog function: acetyl-coenzyme A synthetase
Edwardsiella tarda EIB202 ETAE_0188 -97 4.4 TTACGTGATCGTGCGCGCAAAA
Position: -175
Score: 4.2
Sequence: AGTCTTGATGACGGTCACAAAA
Locus tag: ETAE_0293
ETAE_0293 -175 4.2 AGTCTTGATGACGGTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fucA
Ortholog function: L-fuculose phosphate aldolase
Escherichia coli str. K-12 substr. MG1655 b2800 -144 4.1 TTAGTTGAACCAGGTCACAAAA
-54 4 TAGTGTGAAAGGAACAACATTA
Salmonella typhimurium LT2 STM2974 -157 4.8 TTAATTGATGTGAATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_04159 -144 4.7 TTAATTGATGCGTATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03151 -155 4.4 ATAATTGACGCGGCTCACAAAA
Edwardsiella tarda EIB202 ETAE_0293 -175 4.2 AGTCTTGATGACGGTCACAAAA
Position: -197
Score: 4.4
Sequence: ATCTGTGAGTATTATCACAGAT
Locus tag: ETAE_0311
ETAE_0311 -197 4.4 ATCTGTGAGTATTATCACAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aspA
Ortholog function: aspartate ammonia-lyase
Escherichia coli str. K-12 substr. MG1655 b4139 -206 4.5 AGCGGTGATCTATTTCACAAAT
-156 4.2 TAAAGTGATCCAGATTACGGTA
Salmonella typhimurium LT2 STM4326 -209 4.2 AGCGGTGACCTATTTCACAAAA
-159 4.2 TTAAGTGATCCAGATTACGGTA
Citrobacter koseri ATCC BAA-895 CKO_03696 -54 4.2 AGCGGTGACCTATTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04529 -204 3.9 AGCGGTGACCCATTTCACAGAT
-154 3.8 ATAAGTGATCAAGCTTACTGAT
Enterobacter sp. 638 Ent638_0326 -205 4.1 AGCGGTGATTCATTTCACAGAT
Erwinia amylovora ATCC 49946 EAM_0416 -228 4.2 CAATGTGACCTGGAACAGATAT
Yersinia pestis KIM y0606 -224 4.6 AAGTGTGAGAGCAATCACAGAT
Serratia proteamaculans 568 Spro_0406 -205 4.7 AAACGTGAATGAGATCACAGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0621 -272 4 ACTCGTGACTACAATCACAGTT
Edwardsiella tarda EIB202 ETAE_0311 -197 4.4 ATCTGTGAGTATTATCACAGAT
Proteus mirabilis HI4320 PMI2546 -206 4.1 ATCCATGAGATAGATCACAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4137 -274 3.8 AGATATAATTGGGGTCACAGTT
-211 5.6 AATTGTGATAAATATCACATAT
Position: -189
Score: 4.6
Sequence: ATCTGTGATAATACTCACAGAT
Position: -95
Score: 3.6
Sequence: TTTTTTGACTCCAATATAATTT
Locus tag: ETAE_0312
ETAE_0312 -189 4.6 ATCTGTGATAATACTCACAGAT
-95 3.6 TTTTTTGACTCCAATATAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fxsA
Ortholog function: suppressor of F plamsid exlusion of phage T7
Escherichia coli str. K-12 substr. MG1655 b4140 -202 4.1 TACCGTAATCTGGATCACTTTA
-152 4.3 ATTTGTGAAATAGATCACCGCT
Salmonella typhimurium LT2 STM4327 -203 4.1 TACCGTAATCTGGATCACTTAA
-153 4.1 TTTTGTGAAATAGGTCACCGCT
Citrobacter koseri ATCC BAA-895 CKO_03695 -156 4.1 TTTTGTGAAATAGGTCACCGCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04530 -140 3.7 ATCTGTGAAATGGGTCACCGCT
Enterobacter sp. 638 Ent638_0327 -151 3.8 ATCTGTGAAATGAATCACCGCT
Erwinia amylovora ATCC 49946 EAM_0417 -161 3.9 ATATCTGTTCCAGGTCACATTG
Yersinia pestis KIM y0607 -245 4.8 ATCTGTGATTGCTCTCACACTT
Serratia proteamaculans 568 Spro_0407 -117 4.9 TTCTGTGATCTCATTCACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0623 -245 3.7 AACTGTGATTGTAGTCACGAGT
-185 3.6 AAATGTGCAAAGGCGCACCCAT
Edwardsiella tarda EIB202 ETAE_0312 -189 4.6 ATCTGTGATAATACTCACAGAT
Proteus mirabilis HI4320 PMI2545 -188 4.7 TTTTGTGATCTATCTCATGGAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4136 -188 5.6 ATATGTGATATTTATCACAATT
Position: -150
Score: 3.9
Sequence: TGCATTGATTTAGTTCACATTC
Locus tag: ETAE_0381
ETAE_0381 -150 3.9 TGCATTGATTTAGTTCACATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbp
Ortholog function: fructose-1,6-bisphosphatase
Escherichia coli str. K-12 substr. MG1655 b4232 -163 3.9 TTTTTTAATCTGCCGCTCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04626 -164 3.9 TTTTCTTATCCGGGGCACATTT
Edwardsiella tarda EIB202 ETAE_0381 -150 3.9 TGCATTGATTTAGTTCACATTC
Position: -96
Score: 4.8
Sequence: TAATTTGAGCCGGTTCACACTT
Locus tag: ETAE_0411
ETAE_0411 -96 4.8 TAATTTGAGCCGGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: deaD
Ortholog function: ATP-independent RNA helicase
Salmonella typhimurium LT2 STM3280.S -154 3.9 CTTTTTGATTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_04559 -103 3.9 CTTTTTGATTGCCATCACCTTC
-48 4.4 TACTTTGAGCCGGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03570 -154 3.8 TTTTTTGCTTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACAT
Enterobacter sp. 638 Ent638_3599 -154 4.1 TCTTATGATTGCCATCACCTTA
-99 4.4 TACTTTGAGCCGGTTCACACTT
Erwinia amylovora ATCC 49946 EAM_3065 -99 4.8 TAATTTGAGCCGGTTCACACTT
Yersinia pestis KIM y0696 -96 4.8 TAATTTGAGCCGGTTCACACTT
Serratia proteamaculans 568 Spro_0495 -96 4.8 TAATTTGAGCCGGTTCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0718 -96 4.4 CAATTTGAGCCGGTTCACACTT
Edwardsiella tarda EIB202 ETAE_0411 -96 4.8 TAATTTGAGCCGGTTCACACTT
Proteus mirabilis HI4320 PMI3424 -80 5 TAATTTGAGCCAGTTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4523 -95 5 TAATTTGAGCCAGTTCACATTT
Position: -305
Score: 4.5
Sequence: TTTTGTGATAGCTCTCAACCTT
Locus tag: ETAE_0435
ETAE_0435 -305 4.5 TTTTGTGATAGCTCTCAACCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuT
Ortholog function: Hexuronate transporter
Escherichia coli str. K-12 substr. MG1655 b3093 -274 4.2 TTTCGTGAGTTAGATCAATAAA
-152 5.1 ATTTGTGATGGCTCTCACCTTT
Citrobacter koseri ATCC BAA-895 CKO_04495 -250 5.2 ATTTGTGATGTCACTCACCTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03521 -263 4.4 TTTTGTGACAGCTCTCAACTTT
Enterobacter sp. 638 Ent638_3547 -261 4.2 TTTCGTGAGTTAGATCAATAAA
-139 5.2 TTTTGTGATGTCACTCACCTTT
Serratia proteamaculans 568 Spro_4322 -180 4.8 TTTTGTGATATCACTCAACTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0644 -208 4.8 TTTTGTGATATCACTCAACTTT
Position: -228
Score: 3.8
Sequence: AAGGTTGAGAGCTATCACAAAA
Locus tag: ETAE_0436
ETAE_0436 -228 3.8 AAGGTTGAGAGCTATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxaC
Ortholog function: Uronate isomerase (EC 5.3.1.12)
Edwardsiella tarda EIB202 ETAE_0436 -228 3.8 AAGGTTGAGAGCTATCACAAAA
Position: -232
Score: 4.9
Sequence: TGATGTGATATGCATCACTTTT
Locus tag: ETAE_0482
ETAE_0482 -232 4.9 TGATGTGATATGCATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupC2
Ortholog function: Na+ dependent nucleoside transporter
Yersinia pestis KIM y3744 -154 3.8 CTTTGTCAATAACCTCACATAT
-115 5.5 TAATGTGATTATGATCACATTT
Serratia proteamaculans 568 Spro_0659 -181 3.9 AACCGTGACGCATGTCACGTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0473 -182 4.9 AATTGTGACGAAGATCACTTTT
Edwardsiella tarda EIB202 ETAE_0482 -232 4.9 TGATGTGATATGCATCACTTTT
Proteus mirabilis HI4320 PMI2418 -180 5.2 TAGTGTGATTTAGATCTCATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0519 -178 5.5 TTGTGTGATTCACATCACATTT
Position: -145
Score: 4.4
Sequence: ATTTGTGAGCCAGCTCTCTTTT
Locus tag: ETAE_0492
ETAE_0492 -145 4.4 ATTTGTGAGCCAGCTCTCTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rnk
Ortholog function: Regulator of nucleoside diphosphate kinase
Escherichia coli str. K-12 substr. MG1655 b0610 -140 3.8 GAATGTGACGCAAATCACTTCA
Salmonella typhimurium LT2 STM0616 -141 3.8 GAATGTGAACTAAATCACTTCA
Citrobacter koseri ATCC BAA-895 CKO_02549 -141 3.9 GAATGTGAGCTAAATCACTTCA
Enterobacter sp. 638 Ent638_1148 -187 4.1 AAATCTGAGAACGATCACGTTT
-140 3.8 GAATGTGACATTCATCACTTCA
Serratia proteamaculans 568 Spro_4382 -170 3.7 CTTCGTGATCGGGATCTCTTTC
-67 3.8 TTTTGTGCTGTTTTTCCGAATT
Edwardsiella tarda EIB202 ETAE_0492 -145 4.4 ATTTGTGAGCCAGCTCTCTTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4046 -127 3.7 GTTCGTGATCATGATCTCTTTA
Position: -108
Score: 4.1
Sequence: TAGTTTGACCCTACTCACGCTT
Locus tag: ETAE_0521
ETAE_0521 -108 4.1 TAGTTTGACCCTACTCACGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanE
Ortholog function: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Salmonella typhimurium LT2 STM3337 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Citrobacter koseri ATCC BAA-895 CKO_04626 -116 4.2 TTTAGTGAAGTAGATCGCACTC
Position: -278
Score: 4.9
Sequence: AACTGTGATGCAGCCCACATTT
Locus tag: ETAE_0527
ETAE_0527 -278 4.9 AACTGTGATGCAGCCCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase, large subunit
Escherichia coli str. K-12 substr. MG1655 b3212 -199 4.2 AATTTTGCGCTAAAGCACATTT
Salmonella typhimurium LT2 STM3330 -288 3.7 ATCTGTGCTACAGCACACTTTT
Enterobacter sp. 638 Ent638_3656 -298 3.9 GATAGTGAGTCAGATCACACTC
Edwardsiella tarda EIB202 ETAE_0527 -278 4.9 AACTGTGATGCAGCCCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4009 -241 4 ATATTTGACCTGATTTATATTT
Position: -272
Score: 4
Sequence: AAATGTGATCATACAAACGATT
Locus tag: ETAE_0650
ETAE_0650 -272 4 AAATGTGATCATACAAACGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coaE
Ortholog function: dephospho-CoA kinase
Erwinia amylovora ATCC 49946 EAM_0727 -75 4.4 TCGTGTGATCTGCGCCACATTA
Yersinia pestis KIM y0757 -259 3.8 AAATGTGATCGGGCGTAAAACA
Serratia proteamaculans 568 Spro_0774 -158 3.8 CAGTGTGACCGCCCGCTCATTT
Edwardsiella tarda EIB202 ETAE_0650 -272 4 AAATGTGATCATACAAACGATT
Proteus mirabilis HI4320 PMI2052 -80 3.8 TCTTGTGATAAAAATCAGTTTA
Position: -317
Score: 3.1
Sequence: TATATTCATTTATTTTGCATAT
Position: -143
Score: 3.2
Sequence: TTTCATGATTTACATCAATAGT
Locus tag: ETAE_0658
ETAE_0658 -317 3.1 TATATTCATTTATTTTGCATAT
-143 3.2 TTTCATGATTTACATCAATAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex
Escherichia coli str. K-12 substr. MG1655 b0113 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0151 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03260 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00117 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0659 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0746 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0766 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4012 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3790 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0658 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2047 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -175
Score: 4.2
Sequence: TTTTTTGACAAACATCACCGAT
Locus tag: ETAE_0715
ETAE_0715 -175 4.2 TTTTTTGACAAACATCACCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mltA
Ortholog function: membrane-bound lytic murein transglycosylase A
Edwardsiella tarda EIB202 ETAE_0715 -175 4.2 TTTTTTGACAAACATCACCGAT
Position: -221
Score: 4.4
Sequence: AATAGTGATATATCGCAAAATA
Locus tag: ETAE_0995
ETAE_0995 -221 4.4 AATAGTGATATATCGCAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupB
Ortholog function: HU, DNA-binding transcriptional regulator, beta subunit
Edwardsiella tarda EIB202 ETAE_0995 -221 4.4 AATAGTGATATATCGCAAAATA
Position: -139
Score: 4.4
Sequence: TTAGGTGAGTCACGTCACAATA
Locus tag: ETAE_1034
ETAE_1034 -139 4.4 TTAGGTGAGTCACGTCACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ushA
Ortholog function: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5)
Escherichia coli str. K-12 substr. MG1655 b0480 -174 4 ATTTGTGATTATTACCAGACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00461 -125 3.9 AATTATTATCCAACTAACATAC
-94 3.7 AGGTTTGAAGGAAGTCGCAATT
Enterobacter sp. 638 Ent638_0959 -95 3.9 AGATTTGAGGAAAGTCGCAATT
Serratia proteamaculans 568 Spro_1147 -103 4.6 TAATTTGACGCACATCGCAAAA
Edwardsiella tarda EIB202 ETAE_1034 -139 4.4 TTAGGTGAGTCACGTCACAATA
Proteus mirabilis HI4320 PMI2177 -111 3.7 ATATATAACCTACGTCATAAAA
Position: -76
Score: 4.9
Sequence: AAAAGTGATTATTATCACAAAT
Locus tag: ETAE_1162
ETAE_1162 -76 4.9 AAAAGTGATTATTATCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cdd
Ortholog function: cytidine deaminase
Escherichia coli str. K-12 substr. MG1655 b2143 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 5.1 TAATGAGATTCAGATCACATAT
Salmonella typhimurium LT2 STM2183 -128 4.2 ATTTGCGATACGTCGCGCATTT
-78 4.8 CAATGAGATTTAGATCACATAT
Citrobacter koseri ATCC BAA-895 CKO_00646 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 4.8 CAATGAGATTTGGATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02584 -78 4.4 GAATGAGATATTCATCACATAT
Enterobacter sp. 638 Ent638_2746 -127 4.2 ATTTGCGATGCGTCGCGCAATT
-77 4.9 TAATGAGAACTGGATCACATAT
Erwinia amylovora ATCC 49946 EAM_2202 -124 3.9 ACTTGCGATAAGTCTCTCATTT
-104 4.1 TTTGGTGATGCATTTCATTTAT
-74 4.7 TAGAGCGATTTAGATCACATAT
Yersinia pestis KIM y2657 -75 5 TAATGAGATATAAATCACAATT
Serratia proteamaculans 568 Spro_1568 -127 4.1 ACTTGCGATACATCTCGCAATT
-77 4.5 TAAAGAGATTTACATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2830 -130 4.6 AATTGAGATACATCTCGCATTT
-79 4.5 TAAAGAGATTCCGATCACAATT
Edwardsiella tarda EIB202 ETAE_1162 -76 4.9 AAAAGTGATTATTATCACAAAT
Proteus mirabilis HI4320 PMI0643 -132 4.4 ATTTGAGATGTATCTCCCAATT
-82 5.1 AAATATGATTTTAATCACATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1547 -75 4.7 CTATATGATATTTATCACATTA
Position: -68
Score: 4.9
Sequence: TGATGTGATCAGTAGCACATTT
Locus tag: ETAE_1164
ETAE_1164 -68 4.9 TGATGTGATCAGTAGCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yohJ
Ortholog function: LrgA family protein
Escherichia coli str. K-12 substr. MG1655 b2141 -68 4.9 TAATGTGATCGGTAGCACGTTT
Salmonella typhimurium LT2 STM2181 -68 4.6 TGATGTGATCGGTAGCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_00648 -68 4.6 TGATGTGATCGGTAGCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02582 -68 5 TGATGTGATCGGTAGCACATTT
Enterobacter sp. 638 Ent638_2744 -68 4.7 TGATGTGATCCGTAGCACGTTT
Yersinia pestis KIM y2654 -32 4.7 TAGTGTGATGGGTAGCACAGAA
Serratia proteamaculans 568 Spro_1570 -62 4.3 ATTTGTGGCGGAGGTCACAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2828 -69 4.5 ATTCGTGATCTGTGGCACGTAA
Edwardsiella tarda EIB202 ETAE_1164 -68 4.9 TGATGTGATCAGTAGCACATTT
Proteus mirabilis HI4320 PMI0645 -71 5.2 TATTGTGATCCATAGCACACTT
Position: -196
Score: 3.7
Sequence: TTTGGTGAGCATAATCACATCG
Locus tag: ETAE_1267
ETAE_1267 -196 3.7 TTTGGTGAGCATAATCACATCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompA
Ortholog function: outer membrane protein A
Escherichia coli str. K-12 substr. MG1655 b0957 -188 4 ATGCCTGACGGAGTTCACACTT
Salmonella typhimurium LT2 STM1070 -188 4.3 ATGTCTGACGGAGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02111 -164 4 ATGCCTGACGGAGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00986 -185 3.9 ATGCCTGACAGAGTTCACACTT
Enterobacter sp. 638 Ent638_1469 -189 4 ATGCCTGACGGAGTTCACACTT
Serratia proteamaculans 568 Spro_1754 -195 3.8 TTTTTAGAGCTTTATCACATCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1751 -200 3.9 TCTTATGACACAAATCACATCA
Edwardsiella tarda EIB202 ETAE_1267 -196 3.7 TTTGGTGAGCATAATCACATCG
Position: -314
Score: 5.8
Sequence: TTTTGTGATCTAGATCACACTT
Position: -122
Score: 4
Sequence: CGTTATGCTCCATTTCACATTA
Locus tag: ETAE_1336
ETAE_1336 -314 5.8 TTTTGTGATCTAGATCACACTT
-122 4 CGTTATGCTCCATTTCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flhD
Ortholog function: DNA-binding transcriptional dual regulator with FlhC
Edwardsiella tarda EIB202 ETAE_1336 -122 4 CGTTATGCTCCATTTCACATTA
Position: -141
Score: 4.5
Sequence: TTTAGTGAACTAGATCGCACAA
Locus tag: ETAE_1381
ETAE_1381 -141 4.5 TTTAGTGAACTAGATCGCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3)
Escherichia coli str. K-12 substr. MG1655 b3225 -115 4.6 TTTAGTGAAGCAGATCGCATTA
Salmonella typhimurium LT2 STM3339 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Citrobacter koseri ATCC BAA-895 CKO_04629 -116 4.2 TTTAGTGAAGTAGATCGCACTC
Enterobacter sp. 638 Ent638_3661 -112 4.6 TTTAGTGAAGCAGATCGCATTA
Edwardsiella tarda EIB202 ETAE_1381 -141 4.5 TTTAGTGAACTAGATCGCACAA
Position: -227
Score: 5.1
Sequence: TTTTGTGATGAGCATCACAAAC
Locus tag: ETAE_1483
ETAE_1483 -227 5.1 TTTTGTGATGAGCATCACAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapA
Ortholog function: glyceraldehyde-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b1779 -226 5.3 AATCGTGATGAAAATCACATTT
Salmonella typhimurium LT2 STM1290 -226 4.8 AATCGTGACTGATGTCACATTA
Citrobacter koseri ATCC BAA-895 CKO_01800 -226 5 AATCGTGATCGGAATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01197 -225 5.2 AATTGTGACTTAAATCACGTTT
Enterobacter sp. 638 Ent638_1675 -225 5.7 AATTGTGATCTTTCTCACATAT
Erwinia amylovora ATCC 49946 EAM_1931 -215 5.4 AATTGTGATGCAGATCACCATT
Yersinia pestis KIM y2165 -218 5.1 AAATGTGATAAAAATCGCAAAT
Serratia proteamaculans 568 Spro_2728 -227 5.6 ATATGTGATACCGATCACATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2344 -235 5.8 AATTGTGATGTGTATCACATAA
Edwardsiella tarda EIB202 ETAE_1483 -227 5.1 TTTTGTGATGAGCATCACAAAC
Proteus mirabilis HI4320 PMI1504 -226 5.6 AAATGTGATACATTTCACATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2558 -224 5.4 TATTGTGATGTGACTCGCATAT
Position: -91
Score: 4.9
Sequence: GTTTGTGATGCTCATCACAAAA
Locus tag: ETAE_1484
ETAE_1484 -91 4.9 GTTTGTGATGCTCATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: msrB
Ortholog function: methionine sulfoxide reductase B
Escherichia coli str. K-12 substr. MG1655 b1778 -137 5.2 AAATGTGATTTTCATCACGATT
Salmonella typhimurium LT2 STM1291 -107 4.7 TAATGTGACATCAGTCACGATT
Citrobacter koseri ATCC BAA-895 CKO_01799 -107 4.9 AAACGTGATTCCGATCACGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01198 -135 5.1 AAACGTGATTTAAGTCACAATT
Enterobacter sp. 638 Ent638_1676 -137 5.2 ATATGTGAGAAAGATCACAATT
Erwinia amylovora ATCC 49946 EAM_1930 -137 5.2 AATGGTGATCTGCATCACAATT
Yersinia pestis KIM y2164 -85 5.1 ATTTGCGATTTTTATCACATTT
Serratia proteamaculans 568 Spro_2727 -143 5.7 ATATGTGATCGGTATCACATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2343 -135 5.6 TTATGTGATACACATCACAATT
Edwardsiella tarda EIB202 ETAE_1484 -91 4.9 GTTTGTGATGCTCATCACAAAA
Proteus mirabilis HI4320 PMI1503 -137 5.3 TTATGTGAAATGTATCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2557 -267 4.6 ATATGCGAGTCACATCACAATA
Position: -206
Score: 4
Sequence: AACTGTTAGGTCGATCACTTAT
Locus tag: ETAE_1506
ETAE_1506 -206 4 AACTGTTAGGTCGATCACTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tdk
Ortholog function: Thymidine kinase (EC 2.7.1.21)
Yersinia pestis KIM y2145 -208 4.9 TATTGTGAGATTGCTCATATAA
Serratia proteamaculans 568 Spro_2705 -203 4.3 AAATGTGATGTCAGACAGAAAT
Edwardsiella tarda EIB202 ETAE_1506 -206 4 AACTGTTAGGTCGATCACTTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2497 -157 4.1 TGGTGTGATGGTGGTCATGAAT
Position: -265
Score: 5
Sequence: TTTCGTGACCTTAATCACAAAA
Locus tag: ETAE_1508
ETAE_1508 -265 5 TTTCGTGACCTTAATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655 b1241 -241 5 AAATTTGATTTGGATCACGTAA
Salmonella typhimurium LT2 STM1749 -242 4.9 AATCTTGATTTAGATCACACAA
Citrobacter koseri ATCC BAA-895 CKO_01318 -242 4.9 AAATTTGATCTGGATCACGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -237 4.7 ATACTTGATCTAAATCACGTAA
Enterobacter sp. 638 Ent638_2304 -253 4.1 TAAATTGATTCAGATCATGTTT
Erwinia amylovora ATCC 49946 EAM_1900 -223 3.9 ATTGATGATCTGCATCATCTTT
Yersinia pestis KIM y2023 -286 5.3 TTTTGTGATTTAAATCACGAAA
Serratia proteamaculans 568 Spro_2704 -278 5.1 TTTTATGATTTAAATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -315 4.5 AAGTTCGATGTTGATCACAAAA
Edwardsiella tarda EIB202 ETAE_1508 -265 5 TTTCGTGACCTTAATCACAAAA
Proteus mirabilis HI4320 PMI1486 -246 5.4 TATTGTGATGTAGATCACTTTA
-187 3.7 AAAGGAGATCTTTTTAAAATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -237 3.7 TATTTTTATTAGATTAAAAATT
-138 4.6 TTATGTGATTAAGATCAATATA
Position: -161
Score: 3.9
Sequence: CTGATTGATGTCTATCAAATTT
Locus tag: ETAE_1528
ETAE_1528 -161 3.9 CTGATTGATGTCTATCAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: outer membrane protein W
Escherichia coli str. K-12 substr. MG1655 b1256 -166 4.9 AAAATTGATTTAAATCACATTA
-82 3.8 TAATGTGATCTATGTAGGATCA
Salmonella typhimurium LT2 STM1732 -82 4.2 AAATGTGATCTGTATTAGATCA
Citrobacter koseri ATCC BAA-895 CKO_01333 -82 3.9 TAATGTGATCTGTATTGGATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01248 -101 3.9 CATTGCGATCGGTAGCAAAAAT
-45 4 TAGTGTGATCTAAAACAGATCA
Enterobacter sp. 638 Ent638_2283 -121 3.7 AAAATTAATCTGGATCAACAAA
Yersinia pestis KIM y2044 -69 3.9 AGATGTGATCTCGATTAGATCA
Serratia proteamaculans 568 Spro_2674 -135 3.8 TTTTTTGATTCAGATCAATCCT
Edwardsiella tarda EIB202 ETAE_1528 -161 3.9 CTGATTGATGTCTATCAAATTT
Proteus mirabilis HI4320 PMI1350 -168 4.6 AAATTTGATGTGGATCAATTAT
-85 3.8 AGTTGTGATCGGCATTAGATCA
Photorhabdus luminescens subsp. laumondii TTO1 plu2478 -164 4.3 AACTTTGATTTGGATCAAGTTA
-39 3.8 TATTTTGATTGACTTTAAATCA
Position: -267
Score: 3.9
Sequence: ATTAACGATGGGCGTCACATAA
Locus tag: ETAE_1559
ETAE_1559 -267 3.9 ATTAACGATGGGCGTCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: manX
Ortholog function: PTS enzyme IIAB, mannose-specific
Edwardsiella tarda EIB202 ETAE_1559 -267 3.9 ATTAACGATGGGCGTCACATAA
Position: -113
Score: 4.8
Sequence: ATTTGTGCACTTAATCACATAA
Locus tag: ETAE_1713
ETAE_1713 -113 4.8 ATTTGTGCACTTAATCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mlc
Ortholog function: ROK family transcriptional regulatory protein
Escherichia coli str. K-12 substr. MG1655 b1594 -108 4.1 AAATGTGCTGTTAATCACATGC
Salmonella typhimurium LT2 STM1488 -65 3.8 AGTATTGAAGTGTTTCACCATA
Citrobacter koseri ATCC BAA-895 CKO_01593 -107 3.6 AAaTGTGcagTAaATCACAcgg
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01574 -104 3.8 AAATGTGCGGTAAATCACAAGG
Enterobacter sp. 638 Ent638_1919 -107 3.8 AAATGTGCGGTAAATCACAAGG
Erwinia amylovora ATCC 49946 EAM_1710 -143 4.9 TTATGTGCTGTAAATCACATTC
Yersinia pestis KIM y2110 -146 4.8 TTATGTGCAGCAAATCACATAA
Serratia proteamaculans 568 Spro_2283 -111 4.8 ATTTGTGCAGCAAATCACATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2258 -226 4.4 ATATGCGCGCTAAATCACATAA
Edwardsiella tarda EIB202 ETAE_1713 -113 4.8 ATTTGTGCACTTAATCACATAA
Proteus mirabilis HI4320 PMI1292 -126 4.7 ATATGTGCTTTCCATCACGATT
Photorhabdus luminescens subsp. laumondii TTO1 plu2226 -119 4.8 TTTCGTGCTGAATATCACATAT
Position: -63
Score: 4
Sequence: TATCGTGATCCCCATCACTTCC
Locus tag: ETAE_1792
ETAE_1792 -63 4 TATCGTGATCCCCATCACTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroH
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Escherichia coli str. K-12 substr. MG1655 b1704 -106 4.3 AGGTGTGACACACCTCGCACTT
-64 4 TATCGTGATGCGCATCACTTCC
Salmonella typhimurium LT2 STM1347 -106 4.3 AGGTGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Citrobacter koseri ATCC BAA-895 CKO_01728 -115 4.3 AGGTGTGAAACGCCTCGCATTT
-64 4.3 TATTGTGATGCCCATCACTTCC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02162 -63 4 TATCGTGATGCGCATCACTTCC
Enterobacter sp. 638 Ent638_1743 -126 3.6 AGTTATGATCGCTTTCACTCTC
-62 3.6 TAAGGTGATGCCCATCACTTCC
Yersinia pestis KIM y1928 -64 4.3 TATTGTGATCGCCATCACTTCC
Serratia proteamaculans 568 Spro_2172 -135 3.9 TTTTGTGCTTTTTTTAGCGATT
-64 4.3 TATTGTGATCGCCATCACTTCC
Edwardsiella tarda EIB202 ETAE_1792 -63 4 TATCGTGATCCCCATCACTTCC
Proteus mirabilis HI4320 PMI1423 -55 3.9 TATTGTGATCTTAATCACTGGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2630 -62 3.8 TATTGTAATTTCCATTATCTAT
Position: -264
Score: 4.2
Sequence: AATTGTGCGCTATGTCTCACTA
Locus tag: ETAE_1836
ETAE_1836 -264 4.2 AATTGTGCGCTATGTCTCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cfa
Ortholog function: cyclopropane fatty acyl phospholipid synthase
Edwardsiella tarda EIB202 ETAE_1836 -264 4.2 AATTGTGCGCTATGTCTCACTA
Position: -55
Score: 3.6
Sequence: TTGTGTAATACTTGTAACGCTA
Locus tag: ETAE_1852
ETAE_1852 -55 3.6 TTGTGTAATACTTGTAACGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpp
Ortholog function: major outer membrane lipoprotein
Escherichia coli str. K-12 substr. MG1655 b1677 -56 3.6 TTGTGTAATACTTGTAACGCTA
Salmonella typhimurium LT2 STM1377 -56 3.6 TTGTGTAATACTTGTAACGCTA
Citrobacter koseri ATCC BAA-895 CKO_01710 -56 3.6 TTGTGTAATACTTGTAACGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02134 -56 3.6 TTGTGTAATACTTGTAACGCTA
Enterobacter sp. 638 Ent638_1767 -56 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia amylovora ATCC 49946 EAM_1656 -56 3.6 TTGTGTAATACTTGTAACGCTA
Serratia proteamaculans 568 Spro_2186 -55 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1866 -56 3.6 TTGTGTAATACTTGTAACGCTA
Edwardsiella tarda EIB202 ETAE_1852 -55 3.6 TTGTGTAATACTTGTAACGCTA
Proteus mirabilis HI4320 PMI1409 -200 4.4 TTTTGTGAAATAACACGCATTT
Position: -70
Score: 5
Sequence: TTATGTGAGTGCTATCACAATA
Locus tag: ETAE_1900
ETAE_1900 -70 5 TTATGTGAGTGCTATCACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_01286
Ortholog function: hypothetical protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2434 -58 4.3 TAGATTGATCTAAATCACAATC
Edwardsiella tarda EIB202 ETAE_1900 -70 5 TTATGTGAGTGCTATCACAATA
Position: -132
Score: 3.9
Sequence: AACCGTGTTTATCCTCACAAAT
Locus tag: ETAE_1921
ETAE_1921 -132 3.9 AACCGTGTTTATCCTCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbI
Ortholog function: Hypothetical transcriptional regulator ygbI
Escherichia coli str. K-12 substr. MG1655 b2735 -166 3.7 TTGTTTGATATTGTGAATATAA
-127 5.2 TATGGTGATCTGATTCACATAA
Salmonella typhimurium LT2 STM2919 -128 4 TGCGGTGAGTTGTTTCACAAAA
-87 3.6 TTTTGTGAAGGCAATCCTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01606 -271 3.6 TAATGTGATTTAATGATAGAAT
-230 4.7 ATATGTGAGAGTTATCACGAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_pKPN4p07051 -233 3.6 TAATGTGATTTAATGATAGAAT
-192 4.7 TTATGTGAGAGTTATCACGAAT
Erwinia amylovora ATCC 49946 EAM_1104 -238 4.5 ATTAGTGATAAACTTCACATCA
Serratia proteamaculans 568 Spro_1493 -211 3.9 ATCAGCGATCGTTGTCACAATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4325 -267 4.8 TGTGGTGATTTTTATCACATAA
Edwardsiella tarda EIB202 ETAE_1921 -132 3.9 AACCGTGTTTATCCTCACAAAT
Position: -93
Score: 3.9
Sequence: ATTTGTGAGGATAAACACGGTT
Locus tag: ETAE_1922
ETAE_1922 -93 3.9 ATTTGTGAGGATAAACACGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbJ
Ortholog function: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Escherichia coli str. K-12 substr. MG1655 b2736 -90 4.9 TTATGTGAATCAGATCACCATA
Salmonella typhimurium LT2 STM2918 -90 4 TTTTGTGAAACAACTCACCGCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01605 -91 5 ATTCGTGATAACTCTCACATAT
Erwinia amylovora ATCC 49946 EAM_1106 -90 4.4 TGATGTGAAGTTTATCACTAAT
Serratia proteamaculans 568 Spro_1492 -92 4.1 AATTGTGACAACGATCGCTGAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4327 -92 4.5 TTATGTGATAAAAATCACCACA
Edwardsiella tarda EIB202 ETAE_1922 -93 3.9 ATTTGTGAGGATAAACACGGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2507 -147 3.8 ATAAATAATATAAATCAAATAA
-90 3.7 GAATGTGATAACCATCGTGTAT
Position: -166
Score: 4.3
Sequence: TTATTTGATTTGAATCAATTTT
Locus tag: ETAE_2070
ETAE_2070 -166 4.3 TTATTTGATTTGAATCAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Escherichia coli str. K-12 substr. MG1655 b1109 -154 3.9 AAACTTGATTAACATCAATTTT
Salmonella typhimurium LT2 STM1211 -154 4.1 AAACTTGATGCACATCAATTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01106 -152 4.1 AAACTTGATGCACATCAATTTT
Enterobacter sp. 638 Ent638_1624 -153 4 AAACTTGATTCATATCAATTTT
Erwinia amylovora ATCC 49946 EAM_1473 -55 3.7 TAAGGTTATTTTATTAACCTTT
Yersinia pestis KIM y1777 -152 3.8 AAAGTTGATATATATCAATTTT
Serratia proteamaculans 568 Spro_1926 -153 4.3 AAGTTTGATGTACATCAATTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1815 -153 4 TAAATTGATATATATCAATTTT
Edwardsiella tarda EIB202 ETAE_2070 -166 4.3 TTATTTGATTTGAATCAATTTT
Proteus mirabilis HI4320 PMI0875 -157 4.6 TTTTTTGATATAAATCAACTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2821 -154 3.8 GAATTTGATGTTGTTCAATTTT
Position: -104
Score: 3.8
Sequence: TATAGTGACAGCGCTCAATAAA
Locus tag: ETAE_2177
ETAE_2177 -104 3.8 TATAGTGACAGCGCTCAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroA
Ortholog function: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Escherichia coli str. K-12 substr. MG1655 b0908 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0978 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02164 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00936 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1428 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2783 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2593 -78 3.5 AAGTATGACGGGTATAAAAATG
Edwardsiella tarda EIB202 ETAE_2177 -104 3.8 TATAGTGACAGCGCTCAATAAA
Position: -73
Score: 3.6
Sequence: ATGTCTGTCTGAGGTCACATTT
Position: -33
Score: 3.6
Sequence: ATAATTCATGCAGTTAACATAA
Locus tag: ETAE_2179
ETAE_2179 -73 3.6 ATGTCTGTCTGAGGTCACATTT
-33 3.6 ATAATTCATGCAGTTAACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ansB
Ortholog function: periplasmic L-asparaginase II
Escherichia coli str. K-12 substr. MG1655 b2957 -125 4 TTTTGTTACCTGCCTCTAACTT
Salmonella typhimurium LT2 STM3106 -125 4.3 TTTTGTTATCCATCTCTAAAAA
Citrobacter koseri ATCC BAA-895 CKO_04332 -125 3.6 TTTTGATATCCATCTCTAAAAA
Proteus mirabilis HI4320 PMI0708 -81 3.6 ATTCGTTCTATTTATCACGGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1616 -76 3.8 AAGTCTGGTATGTATCACAGAT
Position: -164
Score: 3.8
Sequence: AAGTTTGAGGCAGTTAACGCAA
Position: -144
Score: 3.6
Sequence: AATTGTGCGGCAGTGCGCTTTT
Locus tag: ETAE_2208
ETAE_2208 -164 3.8 AAGTTTGAGGCAGTTAACGCAA
-144 3.6 AATTGTGCGGCAGTGCGCTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpS
Ortholog function: ATP-dependent Clp protease adaptor protein
Escherichia coli str. K-12 substr. MG1655 b0881 -164 4 AAATTTGAAGCAGTTAACGCTA
Salmonella typhimurium LT2 STM0944 -164 4 AAATTTGAAGCAGTTAACGCTA
-104 3.6 AGATGTTAGTTATCTATCAATT
Citrobacter koseri ATCC BAA-895 CKO_02199 -164 4 AAATTTGAAGCAGTTAACGCTA
-135 4.2 TAATGTGACAGATGTCGCGGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00914 -167 4 AAATTTGAAGCAGTTAACGCTA
-77 4.3 ATTTGTGATGAGCATAACCTCT
Enterobacter sp. 638 Ent638_1398 -161 3.9 ATTTTTGAAGCAGTTAACGCTA
-132 3.8 GAATGTGACAGATATCGCGGAT
Erwinia amylovora ATCC 49946 EAM_1320 -161 4 AAATTTGAAGCAGTTAACGCTA
-132 4.5 TTTTGTGATAGAGGTCGCTATT
Serratia proteamaculans 568 Spro_1673 -176 3.6 AAGTTTGAAGCAGGTAACGCTA
Edwardsiella tarda EIB202 ETAE_2208 -164 3.8 AAGTTTGAGGCAGTTAACGCAA
-144 3.6 AATTGTGCGGCAGTGCGCTTTT
Proteus mirabilis HI4320 PMI0689 -268 3.7 TGTCTTTATTTACTTAACATTA
-148 4.1 AACTTTGATGTAGCTAACGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1593 -170 4.3 AAGTTTGATATAGATAACGATA
Position: -188
Score: 4.2
Sequence: AATCGTGAGGCGGATCAACCAA
Locus tag: ETAE_2289
ETAE_2289 -188 4.2 AATCGTGAGGCGGATCAACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b4322 -271 3.8 TGTTGCGATGAATGTCACATCC
-186 4.5 TCTTGTGATGTGGTTAACCAAT
Salmonella typhimurium LT2 STM3135 -205 4.3 AAAATTGACACAGATCAAATAA
-155 4.6 ATTTGTGATTTGGTTAGCCAAT
Citrobacter koseri ATCC BAA-895 CKO_00609 -115 3.9 GATTGTGAGCTGGATCAATCAA
Enterobacter sp. 638 Ent638_2767 -116 3.9 TTCTGTGAGTTGGATCAATCAA
Serratia proteamaculans 568 Spro_3238 -167 3.9 AACCGTGAAGTGGATCAACCAA
-48 4.1 AATCTTGATCACCACCACAATA
Edwardsiella tarda EIB202 ETAE_2289 -188 4.2 AATCGTGAGGCGGATCAACCAA
Position: -131
Score: 4.4
Sequence: AAGTGTGTTCTGCTGCACAATT
Locus tag: ETAE_2298
ETAE_2298 -131 4.4 AAGTGTGTTCTGCTGCACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: spr
Ortholog function: predicted peptidase, outer membrane lipoprotein
Escherichia coli str. K-12 substr. MG1655 b2175 -130 4.1 TTTTGTGCGTTAGTCCACAGAT
Salmonella typhimurium LT2 STM2214 -128 3.7 ATTTGTGCGTTCCGCCACAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02608 -292 3.6 TAGGGTAATCTCGTTCTCGTTT
-234 4.2 AATTGTGCGTGACTGCACAAAT
Enterobacter sp. 638 Ent638_2771 -250 3.6 AATCGCTTTGTCTATCACAATT
Yersinia pestis KIM y2908 -128 3.7 GAATGTGCGTTCATGCACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2735 -159 3.9 TAATGTGCATTCTGGCACACTT
Edwardsiella tarda EIB202 ETAE_2298 -131 4.4 AAGTGTGTTCTGCTGCACAATT
Proteus mirabilis HI4320 PMI0831 -129 4.2 TTACGTGCTTTAGAGCACGTTT
Position: -199
Score: 4.1
Sequence: AAATGTGCTGAAGGTCTAAAAT
Locus tag: ETAE_2303
ETAE_2303 -199 4.1 AAATGTGCTGAAGGTCTAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruB
Ortholog function: PTS system, fructose-specific IIA/FPr component
Escherichia coli str. K-12 substr. MG1655 b2169 -178 4.3 AATTGTGCAGCACATCAAACTT
Salmonella typhimurium LT2 STM2206 -177 4.6 AAATGTGCTTCACCTCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_00613 -50 4.1 AAGTGTGCTTTATCTCTAAATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02600 -177 3.5 AAGTGTGCAGTACCTCTAAGTT
Enterobacter sp. 638 Ent638_2763 -178 4.3 AAATGTGCTGCACTTCTAAATT
Erwinia amylovora ATCC 49946 EAM_2223 -179 4.4 AAATGTGCTGGCTGTCAAAAAT
Yersinia pestis KIM y2887 -178 4.1 AAATGTGCGGAATGTCAAAAAT
Serratia proteamaculans 568 Spro_3230 -177 4 AAGTGTGCGTGAGGTCAAAAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2729 -180 4.1 AAATGTGCGTGATGTCAAAATT
Edwardsiella tarda EIB202 ETAE_2303 -199 4.1 AAATGTGCTGAAGGTCTAAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1992 -180 4.7 AAATGTGAGTAATCTCAAAAAA
Position: -124
Score: 4.3
Sequence: AAGTGTGATTGATGTCACTTTG
Position: -72
Score: 3.6
Sequence: CGGTGTGATGTCCATCAATGAA
Locus tag: ETAE_2360
ETAE_2360 -124 4.3 AAGTGTGATTGATGTCACTTTG
-72 3.6 CGGTGTGATGTCCATCAATGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycdZ
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1036 -52 4 AAATGTGTGCTCGATCTCATTC
-50 3.7 ATGTGTGCTCGATCTCATTCAT
Citrobacter koseri ATCC BAA-895 CKO_02033 -40 3.9 AAATGTGTGCGTGATCTCATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01059 -52 4.1 TACTGTGTTTTAGATCGCATTC
Serratia proteamaculans 568 Spro_3290 -125 4.2 TTTTGTGACAAATTCCACATCT
-96 3.6 TATCTTGTTTCTCATTACATAT
-73 4.6 TTATGTGAAATACATCACATGA
Edwardsiella tarda EIB202 ETAE_2360 -124 4.3 AAGTGTGATTGATGTCACTTTG
-72 3.6 CGGTGTGATGTCCATCAATGAA
Proteus mirabilis HI4320 PMI3124 -240 3.7 ATTAATAATATATATCAAACAA
Position: -34
Score: 3.6
Sequence: TTTTTTAACTCTTATCGAATAA
Locus tag: ETAE_2396
ETAE_2396 -34 3.6 TTTTTTAACTCTTATCGAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfbV
Ortholog function: putative cytoplasmic protein
Escherichia coli str. K-12 substr. MG1655 b2295 -263 3.6 ATTTATGATTAACATCATGCAC
-54 4.1 AGTTGTGAATTTGCACAAATTT
Erwinia amylovora ATCC 49946 EAM_2300 -44 4 TTGTGTGTTTTTTTTAAAATTT
Edwardsiella tarda EIB202 ETAE_2396 -34 3.6 TTTTTTAACTCTTATCGAATAA
Proteus mirabilis HI4320 PMI1770 -290 3.7 ATTAATGATACGCATCATGCTT
-260 3.6 AAACTTGATGCTAATTATAGTT
Position: -40
Score: 4.8
Sequence: TAATGTGAACAAAATCACGTTA
Locus tag: ETAE_2518
ETAE_2518 -40 4.8 TAATGTGAACAAAATCACGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiT
Ortholog function: ABC transporter ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b0820 -124 4.4 AGATGTGTACGAAATCACATTT
Salmonella typhimurium LT2 STM0838 -124 4 AGATGTGTACGAAATCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_02298 -148 4.4 AGATGTGTACGAAATCACATTT
Enterobacter sp. 638 Ent638_1311 -125 4.4 AGATGTGTACGAAATCACATTT
Yersinia pestis KIM y2677 -295 3.9 TATCGTTATACCCGTCATACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3010 -41 4 TAATGCGCGCCAAATCACATTC
Edwardsiella tarda EIB202 ETAE_2518 -40 4.8 TAATGTGAACAAAATCACGTTA
Position: -195
Score: 3.7
Sequence: TAGTGTAAGCGATACCACAAAC
Locus tag: ETAE_2564
ETAE_2564 -195 3.7 TAGTGTAAGCGATACCACAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galE2
Ortholog function: UDP-galactose-4-epimerase
Escherichia coli str. K-12 substr. MG1655 b0759 -78 3.8 TAATTTATTCCATGTCACACTT
Salmonella typhimurium LT2 STM0776 -78 3.7 TAATTTATTACATGTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02376 -36 3.7 TAATATATTCCATGTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00773 -78 3.7 TAACTTGTGCTATGTCACACTT
-44 4.1 ATATGCTATCTTCCTCACAAAC
Yersinia pestis KIM y3043 -163 3.7 TTATTTGTCTATGCTCACAGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1389 -72 3.7 ATTCTCGCTGTAGATCACCTTT
Edwardsiella tarda EIB202 ETAE_2564 -195 3.7 TAGTGTAAGCGATACCACAAAC
Position: -222
Score: 3.6
Sequence: TATTGTTATATTTGTTATCTTT
Locus tag: ETAE_2580
ETAE_2580 -222 3.6 TATTGTTATATTTGTTATCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cydA
Ortholog function: cytochrome d terminal oxidase, polypeptide subunit I
Edwardsiella tarda EIB202 ETAE_2580 -222 3.6 TATTGTTATATTTGTTATCTTT
Position: -261
Score: 3.7
Sequence: ATGCGTGACCGTTGTCACTGTT
Locus tag: ETAE_2588
ETAE_2588 -261 3.7 ATGCGTGACCGTTGTCACTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Enterobacter sp. 638 Ent638_1222 -295 4.2 TATCGTGACTGTGATCACTGTT
Erwinia amylovora ATCC 49946 EAM_1168 -249 4.4 AAGTGTGATTTTTGTCACTGTT
-190 3.6 TAATGAGATTGTGATCCACTTA
Yersinia pestis KIM y3071 -254 4.5 AATCGTGATCCTAATCACTGTT
Serratia proteamaculans 568 Spro_1263 -253 4.3 ATCCGTGATCTAAATCACTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1357 -265 4.7 ATTCGTGATCTAAATCACTGTT
Edwardsiella tarda EIB202 ETAE_2588 -261 3.7 ATGCGTGACCGTTGTCACTGTT
Proteus mirabilis HI4320 PMI0565 -264 4.3 AAAAGTGATCCCTCTCACTGTT
Position: -157
Score: 4.8
Sequence: ATTGGTGATAGTTATCACAAAT
Locus tag: ETAE_2616
ETAE_2616 -157 4.8 ATTGGTGATAGTTATCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagE
Ortholog function: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Enterobacter sp. 638 Ent638_1194 -162 4.4 TTTGGTGACAAAACTCACAAAA
-128 3.6 ATTTGCGATACGAATTAATTTT
Yersinia pestis KIM y1203 -206 4.9 TTTGGTGATATTTATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1327 -202 5 TTTGGTGATTTTTATCACATAA
Edwardsiella tarda EIB202 ETAE_2616 -157 4.8 ATTGGTGATAGTTATCACAAAT
Proteus mirabilis HI4320 PMI0455 -150 4.6 ATAGGTGACTTTAATCACAAAT
Position: -190
Score: 5
Sequence: ATTTGTGATAACTATCACCAAT
Locus tag: ETAE_2617
ETAE_2617 -190 5 ATTTGTGATAACTATCACCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Escherichia coli str. K-12 substr. MG1655 b0678 -212 4.3 AAATTTAATTCGTATCGCAAAT
-178 4.6 TTTTGTGAGTTTTGTCACCAAA
Salmonella typhimurium LT2 STM0684 -205 3.7 AAAATTAATTCGCCTCGCAAAT
-171 4.7 TTTTGTGATTATAATCACTAAA
Citrobacter koseri ATCC BAA-895 CKO_02486 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 5.2 TTTTGTGATTTGAATCACCAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00699 -217 3.8 AAAATTAATTCGTATCGCAAAT
-183 5 TTTTGTGATAATTATCACCAAA
Enterobacter sp. 638 Ent638_1193 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 4.6 TTTTGTGAGTTTTGTCACCAAA
Erwinia amylovora ATCC 49946 EAM_1147 -195 4.9 ATATGTGATTAAAGTCACCTTA
Yersinia pestis KIM y1202 -214 5.1 TTTTGTGATAAATATCACCAAA
Serratia proteamaculans 568 Spro_1227 -194 5.3 TTTTGTGATTTACATCACCAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1326 -180 5 TTATGTGATAAAAATCACCAAA
Edwardsiella tarda EIB202 ETAE_2617 -190 5 ATTTGTGATAACTATCACCAAT
Proteus mirabilis HI4320 PMI0454 -217 4.9 ATTTGTGATTAAAGTCACCTAT
Position: -258
Score: 3.7
Sequence: ATTGGTGATCTATGTATTATTT
Locus tag: ETAE_2666
ETAE_2666 -258 3.7 ATTGGTGATCTATGTATTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fixA
Ortholog function: electron transfer flavoprotein, beta subunit
Escherichia coli str. K-12 substr. MG1655 b0041 -215 4.1 ATTGGTGATCCATAAAACAATA
-158 4 ATTGGTGAGGAACTTAACAATA
Salmonella typhimurium LT2 STM0075 -281 3.8 ATTTTTGCTTTATTTATCAATT
-196 3.7 AATATTGAAAATTTTCATATTT
-157 4 ATTGGTGAGGTGCGTAACACTA
Citrobacter koseri ATCC BAA-895 CKO_03341 -179 4 ATTGGTGATCCATCAAACAATA
-122 4.4 ATTAGTGAGATGCTTAACAATA
Edwardsiella tarda EIB202 ETAE_2666 -258 3.7 ATTGGTGATCTATGTATTATTT
Proteus mirabilis HI4320 PMI2653 -216 4.3 ATTGTTGATCCAGATAACAATA
-157 4.3 ATTGGTGATGTATTTAGCAATA
-98 4 ATTGGTGATCTAGATTTAATTT
Position: -19
Score: 3.8
Sequence: AATCTTGAGGGAAATAACAATG
Locus tag: ETAE_2755
ETAE_2755 -19 3.8 AATCTTGAGGGAAATAACAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhaM
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b4470 -228 4.6 TTTTGTGATCTGCCGCAAATAG
Salmonella typhimurium LT2 STM3238 -230 4.5 TGTTGTGATACGCGTCAAATAG
Citrobacter koseri ATCC BAA-895 CKO_04510 -180 4.7 TGTTGTGATCTGCTTCAAGAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04419 -230 3.6 CGCTGTGAGCAGATTAACAAAA
Position: -82
Score: 3.8
Sequence: ATCCGTGATTTTCCTCTCACAC
Locus tag: ETAE_2834
ETAE_2834 -82 3.8 ATCCGTGATTTTCCTCTCACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: raiA
Ortholog function: stationary phase translation inhibitor and ribosome stability factor
Escherichia coli str. K-12 substr. MG1655 b2597 -81 4.8 TTATGAGATTTTCATCACACAT
Citrobacter koseri ATCC BAA-895 CKO_03918 -40 5.2 TAATGTGATTTAAATCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02919 -88 5.6 AAATGTGATTTATATCACACAT
Enterobacter sp. 638 Ent638_3076 -81 5.4 ATGTGTGATTTAGATCACACAT
Erwinia amylovora ATCC 49946 EAM_2617 -83 5.2 AAATGTGATTTCAATCACGATT
Serratia proteamaculans 568 Spro_0882 -83 4.8 ATACGTGATTTTCATCACGCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3349 -86 4 AAAAGCGATCAATCTCACGCTT
Edwardsiella tarda EIB202 ETAE_2834 -82 3.8 ATCCGTGATTTTCCTCTCACAC
Proteus mirabilis HI4320 PMI0391 -82 4.6 AAAAGTGATCTTGATCATGTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1266 -87 5.1 AATAGTGATTTAGATCACCTTT
Position: -117
Score: 3.8
Sequence: ATGTACGATATTGTTTACATAT
Locus tag: ETAE_2837
ETAE_2837 -117 3.8 ATGTACGATATTGTTTACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroF
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Salmonella typhimurium LT2 STM2670 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02923 -159 3.8 TATTGTTATACGCATCGCGCCA
Edwardsiella tarda EIB202 ETAE_2837 -117 3.8 ATGTACGATATTGTTTACATAT
Proteus mirabilis HI4320 PMI0387 -214 4.5 TTATTTTATCTTAGTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1262 -262 3.6 TGTTTTGATATTGATTTTATTT
Position: -186
Score: 3.7
Sequence: TAGCGTTATTTTTCTCATCATT
Locus tag: ETAE_2868
ETAE_2868 -186 3.7 TAGCGTTATTTTTCTCATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gadB
Ortholog function: Glutamate decarboxylase (EC 4.1.1.15)
Escherichia coli str. K-12 substr. MG1655 b1493 -297 3.6 TTTTATAAATGCGTTCAAAATA
-158 3.3 TATTGTATTGTTTTTCAATGAA
-128 3.3 ATTCGCGTAATATCTCACGATA
Edwardsiella tarda EIB202 ETAE_2868 -186 3.7 TAGCGTTATTTTTCTCATCATT
Position: -245
Score: 4.6
Sequence: TAATTTGATGAGAATCTCAATT
Locus tag: ETAE_2935
ETAE_2935 -245 4.6 TAATTTGATGAGAATCTCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tsx
Ortholog function: Nucleoside-specific channel-forming protein Tsx precursor
Escherichia coli str. K-12 substr. MG1655 b0411 -250 3.7 TTTTGTTACTCTGCTTACATCA
-129 3.9 AACTGTGAAACGAAACATATTT
Salmonella typhimurium LT2 STM0413 -129 4 ATATGTGAAACAAGACATATTT
Citrobacter koseri ATCC BAA-895 CKO_02750 -131 3.7 ATCTGTGAAACAAGACATATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00363 -131 3.8 TTATGTGAAACAACACGTATTT
Enterobacter sp. 638 Ent638_0879 -124 4.1 ATATGTGAAACAACACATATTT
Erwinia amylovora ATCC 49946 EAM_2589 -218 5.3 ATTTGTGATAAAAATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3796 -172 5.5 TTATGTGATTAAAATCACATAA
Edwardsiella tarda EIB202 ETAE_2935 -245 4.6 TAATTTGATGAGAATCTCAATT
Position: -276
Score: 4
Sequence: TTTTGTTATGTATAAAACGTTA
Locus tag: ETAE_2950
ETAE_2950 -276 4 TTTTGTTATGTATAAAACGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiA
Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03349 -82 3.9 TTGTGTGATCTGCATCGCAGGG
Enterobacter sp. 638 Ent638_3333 -47 3.8 TAATGTGACACCGGTCACAGGG
Yersinia pestis KIM y3302 -114 4.2 AACTGTGATCTCGCTAGAATTA
Edwardsiella tarda EIB202 ETAE_2950 -276 4 TTTTGTTATGTATAAAACGTTA
Proteus mirabilis HI4320 PMI2032 -96 3.8 TAAAATGTTGTGTCTCAAATTT
Position: -48
Score: 3.8
Sequence: TAACGTTTTATACATAACAAAA
Locus tag: ETAE_2951
ETAE_2951 -48 3.8 TAACGTTTTATACATAACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: iciA
Ortholog function: chromosome replication initiation inhibitor protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03350 -107 3.8 CCCTGCGATGCAGATCACACAA
Enterobacter sp. 638 Ent638_3334 -126 3.9 CCCTGTGACCGGTGTCACATTA
-48 3.7 ATTTGTGTCATAGTGCAGAATA
Yersinia pestis KIM y3303 -249 3.7 TAATTCTAGCGAGATCACAGTT
Edwardsiella tarda EIB202 ETAE_2951 -48 3.8 TAACGTTTTATACATAACAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3610 -41 3.6 CATAGTGATATTCAGAAAAATA
Position: -233
Score: 4.9
Sequence: AATTGTGATGCAATGCACGTTT
Locus tag: ETAE_2958
ETAE_2958 -233 4.9 AATTGTGATGCAATGCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: epd
Ortholog function: D-erythrose 4-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2927 -213 4.7 AAGTGTGATGTGAGTCAGATAA
Salmonella typhimurium LT2 STM3070 -213 5 AAATGTGATGCAGGTCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_04297 -213 4.8 AAGTGTGATGCAGGTCAGATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03356 -213 4.8 AAATGTGATGTGAGTCATATAG
Enterobacter sp. 638 Ent638_3340 -215 4.5 AAATGTGACGCAAGTCATATAG
Erwinia amylovora ATCC 49946 EAM_2813 -208 4.1 TTTTGTGACGCAGATCGAAAGT
Yersinia pestis KIM y3309 -216 3.7 AATTGTGCCCTTTTTCAGGGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3913 -194 4.1 TTTTATGACGCAGGTCACTCTT
Edwardsiella tarda EIB202 ETAE_2958 -233 4.9 AATTGTGATGCAATGCACGTTT
Proteus mirabilis HI4320 PMI0241 -253 4.4 AAATGTTAACAAGAGCACATTT
Position: -275
Score: 3.7
Sequence: CAAAGTGAAAACGATTACATTT
Position: -61
Score: 4.5
Sequence: TTATGTGATCATGCGCACTTTA
Locus tag: ETAE_2966
ETAE_2966 -275 3.7 CAAAGTGAAAACGATTACATTT
-61 4.5 TTATGTGATCATGCGCACTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: galP
Ortholog function: sugar transporter
Escherichia coli str. K-12 substr. MG1655 b2943 -156 3.6 TATGATGATATAACTCAATTAT
-82 4.9 TGATGTGATTTGCTTCACATCT
Salmonella typhimurium LT2 STM3091 -83 4.6 CATTGTGATTAGCCTCACATCT
Citrobacter koseri ATCC BAA-895 CKO_04318 -83 5.3 TAACGTGATTCGAATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03376 -84 3.8 AGCCGTGATTATAGTCACGTTT
Enterobacter sp. 638 Ent638_3347 -171 3.9 TATTGGGATGCACATCAACTCT
-102 3.7 TAGTGTAACCGATTACACCAAT
-84 5.3 CAATGTGATTTATCTCACATAT
Erwinia amylovora ATCC 49946 EAM_2827 -152 4.1 TCATGTGATCTGTCGCACAGTC
Serratia proteamaculans 568 Spro_1160 -276 4.5 TGGTGTGATATCGGTTACATTT
-100 3.6 TTGTGTAATCGTTTCCACTAAT
-82 4.6 TAATGTGATCGCACTCACTTAC
Edwardsiella tarda EIB202 ETAE_2966 -275 3.7 CAAAGTGAAAACGATTACATTT
-61 4.5 TTATGTGATCATGCGCACTTTA
Position: -2
Score: 4.6
Sequence: AAATGTTATCTCCATCACTAAT
Locus tag: ETAE_2985
ETAE_2985 -2 4.6 AAATGTTATCTCCATCACTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupG
Ortholog function: Nucleoside permease NupG
Escherichia coli str. K-12 substr. MG1655 b2964 -166 5.2 AAATGTTATCCACATCACAATT
-116 3.8 TTATTTGCCACAGGTAACAAAA
Salmonella typhimurium LT2 STM3113 -166 3.9 AAGTGTTAACTCCGTCACCCTT
-116 3.6 ATATTTGTCACAGGTAACAAAA
-50 3.6 AAATGTGCCTTTTAAAACATTC
Citrobacter koseri ATCC BAA-895 CKO_04339 -166 3.9 AAGTGTTAACTCCATCACTCTT
-116 3.6 ATATTTGTCACAGGTAACAAAA
-50 3.6 AAATGTGCCTTTTAAAACATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03396 -49 4.2 TAATGTTATTTTAAAAACATAA
Enterobacter sp. 638 Ent638_3369 -163 4.5 AAACGTTATTTGCATCACAATC
-114 3.7 TTTTTTGCGGGAGGTAACAAAA
Position: -210
Score: 4.3
Sequence: TTTCGTGATAGCGCTATCATTT
Locus tag: ETAE_3025
ETAE_3025 -210 4.3 TTTCGTGATAGCGCTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00488
Ortholog function: LacI-family transcriptional regulator
Salmonella typhimurium LT2 STM2345 -192 4 AGCTGCGATCGTTATCACAAAG
-143 4.6 AATTGTGATAGCGCTATCAAAT
Citrobacter koseri ATCC BAA-895 CKO_00488 -192 4.6 ATCTGTGATCATATTCACAAAG
-143 4.5 ATATGTGATAGCGCTATCAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01748 -155 4.2 AACTGTGATACACCTCCCAAAG
-53 3.6 AGTTATAATGCGATTCGCAGAT
Enterobacter sp. 638 Ent638_2847 -178 4.1 AGCTGCGATCAAGATCACAAAG
-129 4.6 AATTGTGATAGCGCTATCAAAT
Yersinia pestis KIM y1619 -208 5.4 TAATGTGATCTGGATCTCAATT
-158 4.6 ATTTGTGATAGCGCTATCATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3772 -246 4.5 TAATGTGATTAACATCCAAAAA
-196 4 AACTGTGACCGGCTTAGCACAA
Edwardsiella tarda EIB202 ETAE_3025 -210 4.3 TTTCGTGATAGCGCTATCATTT
Proteus mirabilis HI4320 PMI1778 -139 4.2 AATTGTGATAGCGCTATTATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1978 -195 3.8 GCTAGTGATATTAGTCACAAAT
-145 4.7 AATTGTGATAGCGCTATCATTT
Position: -142
Score: 4.8
Sequence: TAGAGTGATTTTGATCACATTG
Locus tag: ETAE_3115
ETAE_3115 -142 4.8 TAGAGTGATTTTGATCACATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: sn-glycerol-3-phosphate dehydrogenase subunit A
Escherichia coli str. K-12 substr. MG1655 b2241 -165 4.6 AAATGTGAATTGCCGCACACAT
Salmonella typhimurium LT2 STM2284 -163 5 TAATGTGAATTACAGCACATAT
Citrobacter koseri ATCC BAA-895 CKO_00536 -163 4.7 TAATGTGAATTACAGCACAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02647 -165 4.3 TACTGTGAAACATCGCACAATT
-115 3.8 ATGTGAGCACGAAATCACATAA
Enterobacter sp. 638 Ent638_2805 -163 4.1 TACTGTGAATCAACGCACAGAT
Yersinia pestis KIM y0404 -231 3.6 AATTGTTACCTATTTTATGAAA
-155 4.4 ACCTGTGATTTTGATCACAATC
Serratia proteamaculans 568 Spro_0200 -231 3.6 CGCTGTGATGGATGGCGCAATT
-138 4.9 AATCGTGATTATGATCACATTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4165 -148 5.1 TTTAGTGATGCAAATCACACTT
Edwardsiella tarda EIB202 ETAE_3115 -247 4 TACTGTGAGAGATCGCTCATAT
-142 4.8 TAGAGTGATTTTGATCACATTG
Proteus mirabilis HI4320 PMI3592 -262 3.7 TACTGTGAAGTAATACTCAGTT
-170 5.5 ATTTGTGATTAGTATCACATAT
Position: -305
Score: 4.5
Sequence: CAATGTGATCAAAATCACTCTA
Position: -200
Score: 3.7
Sequence: ATATGAGCGATCTCTCACAGTA
Locus tag: ETAE_3116
ETAE_3116 -305 4.5 CAATGTGATCAAAATCACTCTA
-200 3.7 ATATGAGCGATCTCTCACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Escherichia coli str. K-12 substr. MG1655 b2240 -219 3.7 TTGTTTGATTTCGCGCATATTC
-179 3.6 AAACGTGATTTCATGCGTCATT
-129 4.6 ATGTGTGCGGCAATTCACATTT
Salmonella typhimurium LT2 STM2283 -220 3.6 ATGTTTGATTTCGCGCATAATC
-180 4.2 AAACGTGATTTCGTGCGCCTTT
-131 5.2 ATATGTGCTGTAATTCACATTA
Citrobacter koseri ATCC BAA-895 CKO_00537 -221 3.6 TTGTTTGATTTCGCGCATAATC
-181 4 AAACGTGATTTCGTGCGCTTTT
-132 4.8 ATCTGTGCTGTAATTCACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -218 3.8 TTGTTTGATTTCGAGCATATTC
-178 4.6 TTATGTGATTTCGTGCTCACAT
-128 4.5 AATTGTGCGATGTTTCACAGTA
Enterobacter sp. 638 Ent638_2804 -201 3.6 TTGTTTGATTTCGAACATAATC
-161 3.8 AAGCGTGATCTCATGCGCTTAT
-111 4 ATCTGTGCGTTGATTCACAGTA
Erwinia amylovora ATCC 49946 EAM_0195 -240 3.7 AAACGCGATGCGGTTAACGATG
-147 3.7 ATTTGTGCCTCTCTTCACGGTC
Serratia proteamaculans 568 Spro_0199 -249 4.5 GAATGTGATCATAATCACGATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -253 3.7 ATGTTTGATAAAGAGCAAAAAC
-193 4.9 AAGTGTGATTTGCATCACTAAA
Edwardsiella tarda EIB202 ETAE_3116 -200 3.7 ATATGAGCGATCTCTCACAGTA
Proteus mirabilis HI4320 PMI3591 -291 3.6 ATGTTTGATAATGAGCAAAAAC
-232 5.4 ATATGTGATACTAATCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -250 4.9 TATTGTGACAATTGTCACAATT
Position: -131
Score: 4.5
Sequence: ATCTGTGACGCAAATCACTTTT
Locus tag: ETAE_3129
ETAE_3129 -131 4.5 ATCTGTGACGCAAATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aaeR
Ortholog function: LysR-family transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b3243 -37 5.3 TTATGTGATCTAAATCACTTTT
Salmonella typhimurium LT2 STM3367 -37 5.3 TTATGTGATCTAAATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_04651 -37 5.3 ATATGTGATCTAAATCACTTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03652 -55 5.1 ATGTGTGATCTAAATCACTTTT
Enterobacter sp. 638 Ent638_3680 -37 5.3 ATATGTGATCTAAATCACTTTT
Erwinia amylovora ATCC 49946 EAM_3128 -37 5.3 AAATGTGATCTAAATCACTTTT
Yersinia pestis KIM y0180 -55 5.1 ATGTGTGATCTAAATCACTTTT
Serratia proteamaculans 568 Spro_4393 -37 4.9 ATCTGTGATCTAAATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0276 -37 5.1 TAGTGTGATCTAAATCACTTTT
Edwardsiella tarda EIB202 ETAE_3129 -131 4.5 ATCTGTGACGCAAATCACTTTT
Position: -235
Score: 4.1
Sequence: TCCTGTGATGTTGTTCACATGT
Locus tag: ETAE_3192
ETAE_3192 -235 4.1 TCCTGTGATGTTGTTCACATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrdA
Ortholog function: carbonic anhydrase, family 3
Escherichia coli str. K-12 substr. MG1655 b3279 -220 3.8 TCCTGTGAAGTGTTTCACGTTG
Salmonella typhimurium LT2 STM3399 -222 4.3 TTGTGTGAAGTGATTCACATCC
Citrobacter koseri ATCC BAA-895 CKO_04691 -221 3.9 TCTTGTGAAGCGTTTCACTTTG
-81 3.8 ATTTTTGATACCTGAAACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03680 -221 4.6 TTGTGTGAAGTGATTCACATCT
Enterobacter sp. 638 Ent638_3711 -222 4.6 TTGTGTGAAGTGATTCACATCT
-47 3.6 TAATGCGATCAAAGTCTTCTAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3993 -105 3.6 TTACTCGATCCGTGTCACTTTT
Edwardsiella tarda EIB202 ETAE_3192 -235 4.1 TCCTGTGATGTTGTTCACATGT
Position: -116
Score: 3.6
Sequence: AAATATGAGCATCTGCGCACAA
Locus tag: ETAE_3268
ETAE_3268 -116 3.6 AAATATGAGCATCTGCGCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nudE
Ortholog function: ADP compounds hydrolase NudE (EC 3.6.1.-)
Escherichia coli str. K-12 substr. MG1655 b3397 -53 3.7 AAGCGTGTCCGATATCGCACAA
Citrobacter koseri ATCC BAA-895 CKO_04820 -54 4.1 AACCGTGCTGTATATCGCACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03768 -54 4 AAGCGTGTTGCGTATCGCACAA
Enterobacter sp. 638 Ent638_3810 -55 3.6 AACCGTGCGTCATATCGCACAA
Yersinia pestis KIM y3923 -247 4.5 CAATGTGATCAAGTTCTAATAT
Serratia proteamaculans 568 Spro_4612 -135 4.4 CAATGTGATCAAGATCGGATTT
Edwardsiella tarda EIB202 ETAE_3268 -116 3.6 AAATATGAGCATCTGCGCACAA
Position: -82
Score: 3.9
Sequence: TTTTTTGATGACTATCTCGGTT
Locus tag: ETAE_3277
ETAE_3277 -82 3.9 TTTTTTGATGACTATCTCGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pck
Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b3403 -240 4.2 GAATGCGATTCCACTCACAATA
-137 4 TTTCGTGACAGGAATCACGGAG
Salmonella typhimurium LT2 STM3500 -241 4 GAATGCGATTACAGTCACATTA
-107 3.9 AATCGTGATTTTGTCCAGATAC
Citrobacter koseri ATCC BAA-895 CKO_04825 -107 3.9 AATCGTGATTTTGTCCAGATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03773 -242 3.7 GAAAGCGATTACATTCACATTT
-138 3.7 CTTCGTGACAGGAGTCACCGTT
Enterobacter sp. 638 Ent638_3816 -241 4.1 GTATGCGATTACATTCACATTA
Yersinia pestis KIM y3918 -130 4.2 ATTCGTGTTCCATCTCTCATAA
-80 3.8 ATATTTGATAGCTATCGCTGTT
Serratia proteamaculans 568 Spro_4617 -80 4.1 ATATTTGATACCTATCGCGGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4106 -81 4 TTTTATGATTGCTATCGCGGTT
Edwardsiella tarda EIB202 ETAE_3277 -82 3.9 TTTTTTGATGACTATCTCGGTT
Proteus mirabilis HI4320 PMI3015 -131 4 ATTTGTGCATTAGTTCTCGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0100 -86 3.8 TTTTTTGATAACTATCGCTGTT
Position: -138
Score: 4.5
Sequence: AGTTGAGATCATAATCACAAAT
Locus tag: ETAE_3292
ETAE_3292 -138 4.5 AGTTGAGATCATAATCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ulaA
Ortholog function: Ascorbate-specific PTS system, EIIC component
Edwardsiella tarda EIB202 ETAE_3292 -138 4.5 AGTTGAGATCATAATCACAAAT
Position: -212
Score: 3.8
Sequence: AAATGTGATCAGCCGCAATTTC
Locus tag: ETAE_3303
ETAE_3303 -212 3.8 AAATGTGATCAGCCGCAATTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: malT
Ortholog function: transcriptional regulator MalT
Escherichia coli str. K-12 substr. MG1655 b3418 -142 4.3 AATTGTGACACAGTGCAAATTC
Salmonella typhimurium LT2 STM3515 -143 4.3 AATTGTGACAGAGTGCAAATTC
Citrobacter koseri ATCC BAA-895 CKO_04840 -142 4.3 AATTGTGACAGAGTGCAAATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03788 -142 4.4 ATTTGTGACATAGAGCAAATTC
Enterobacter sp. 638 Ent638_3831 -142 4.6 AATTGTGACAGAGTGCAAATTA
Yersinia pestis KIM y3900 -202 4.6 AATTGTGATCCGTAGCAACTTA
Serratia proteamaculans 568 Spro_4637 -203 4 AAGTGTGATCAATAGCAATATA
Edwardsiella tarda EIB202 ETAE_3303 -212 3.8 AAATGTGATCAGCCGCAATTTC
Position: -146
Score: 3.7
Sequence: TAGCGCGGTCCCGATCACACTT
Locus tag: ETAE_3304
ETAE_3304 -146 3.7 TAGCGCGGTCCCGATCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: malP
Ortholog function: maltodextrin phosphorylase
Edwardsiella tarda EIB202 ETAE_3304 -146 3.7 TAGCGCGGTCCCGATCACACTT
Position: -124
Score: 4.3
Sequence: TTGTGTTATCCGCATCGCGTAA
Locus tag: ETAE_3312
ETAE_3312 -124 4.3 TTGTGTTATCCGCATCGCGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -116 4.4 TAATGTTATACATATCACTCTA
Salmonella typhimurium LT2 STM3526 -116 4.4 TAATGTTATACATATCACTCTA
Citrobacter koseri ATCC BAA-895 CKO_04845 -116 4.5 TAATGTTATATGTATCACTCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -119 3.7 ATATGTTACACCCATCACTTCA
-58 3.7 TATAGTGAGCGATATCGAGCAT
Enterobacter sp. 638 Ent638_3835 -116 4.4 TTATGTTATCTCTATCACTCAA
-55 4 TATTATGAGCGATATCGAACAT
Erwinia amylovora ATCC 49946 EAM_3265 -124 4 AGACGTTATCGGCATCACGCAT
Yersinia pestis KIM y3891 -129 4.4 AAATGTTACCTCCATCACGCAT
Serratia proteamaculans 568 Spro_4642 -129 3.6 AACTGTTACCTCTATCACGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -144 4.3 TAATGTGACAACTATCATCATA
-124 4.4 TATTGTTAGCTTCATCACGCAT
Edwardsiella tarda EIB202 ETAE_3312 -124 4.3 TTGTGTTATCCGCATCGCGTAA
Proteus mirabilis HI4320 PMI2930 -129 4.4 AATTGTTATTTATATCACGCAG
Position: -63
Score: 3.4
Sequence: CAATATGTTGTTTATCACTCAA
Position: -61
Score: 3.3
Sequence: ATATGTTGTTTATCACTCAATT
Locus tag: ETAE_3321
ETAE_3321 -63 3.4 CAATATGTTGTTTATCACTCAA
-61 3.3 ATATGTTGTTTATCACTCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ugpB
Ortholog function: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b3453 -182 3.6 ATCCGTGCCCCATCTCCCATTT
Salmonella typhimurium LT2 STM3557 -184 3.5 ATCCGTGCCGTAGCTCCCACTT
Citrobacter koseri ATCC BAA-895 CKO_04874 -185 3.3 TATTTTTCTGTCATTCGCGCAT
-162 3.2 TCATGTTACCTCGCGAGCATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03813 -88 3.4 TATTTTTCTGTAATTCGAACAT
Enterobacter sp. 638 Ent638_3856 -162 3.5 AGTTATTATTCCCGCCACATTA
-58 3.2 TCATGTTACCTCGCGAGCATAA
Erwinia amylovora ATCC 49946 EAM_3285 -171 3.9 GTGTGTGATGCCGTTAACACAG
Yersinia pestis KIM y0434 -72 3.5 AAAACTGATTTATTTCGCTCAT
-41 4.1 TTTTTTGATGTGAGCCACACAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2429 -145 3.5 TATCGCGATACAGTTCATCACT
Edwardsiella tarda EIB202 ETAE_3321 -63 3.4 CAATATGTTGTTTATCACTCAA
Position: -217
Score: 3.9
Sequence: CGGTGTGATAATCCTCAAACTT
Locus tag: ETAE_3343
ETAE_3343 -217 3.9 CGGTGTGATAATCCTCAAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pldB
Ortholog function: Lysophospholipase L2 (EC 3.1.1.5)
Citrobacter koseri ATCC BAA-895 CKO_00166 -60 3.8 TATTGTGTCAGGCATCATAAAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04321 -56 3.8 TTGTGTGATACACGGTAAAAAA
Enterobacter sp. 638 Ent638_3971 -56 4.3 TTTTGTGATGCGTCACGAAAAA
Yersinia pestis KIM y0400 -144 4.8 AGTTGTGCTATGGCTCACAAAA
Serratia proteamaculans 568 Spro_0196 -88 3.8 TTGTAAGAATTGAATCACAATA
-53 4.2 TCTTGTGCCAGAGGTCACATTT
Edwardsiella tarda EIB202 ETAE_3343 -217 3.9 CGGTGTGATAATCCTCAAACTT
Position: -155
Score: 3.6
Sequence: TTATGCGTTTCAGCTCATAGAA
Locus tag: ETAE_3379
ETAE_3379 -155 3.6 TTATGCGTTTCAGCTCATAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dctA
Ortholog function: C4-dicarboxylate transport protein
Escherichia coli str. K-12 substr. MG1655 b3528 -143 4.1 TTGTGCGAGCCAGCTCAAACTT
Salmonella typhimurium LT2 STM3614 -145 4.1 TTGTGCGAGCCAGCTCAAACTT
Citrobacter koseri ATCC BAA-895 CKO_04970 -145 4 TTGTGCGAGCCAGCTCAAAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03878 -143 3.9 TTGTGCGAGTCAGCTCAAAGAT
Erwinia amylovora ATCC 49946 EAM_3380 -134 4.4 TGAAGTGATTCAGCTCATAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4362 -157 3.8 TGACGTGATTCAGCTCTTGTTT
Edwardsiella tarda EIB202 ETAE_3379 -155 3.6 TTATGCGTTTCAGCTCATAGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3205 -176 4.9 TTATGTGATCTATATCTTAAAA
Position: -258
Score: 4.2
Sequence: AAGTGCGATCGGGATCGAAAAA
Position: -175
Score: 3.6
Sequence: ATATGTGATCATATACTCATCG
Locus tag: ETAE_3434
ETAE_3434 -258 4.2 AAGTGCGATCGGGATCGAAAAA
-175 3.6 ATATGTGATCATATACTCATCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cytR
Ortholog function: transcriptional repressor
Escherichia coli str. K-12 substr. MG1655 b3934 -128 3.9 AAATTCAATATTCATCACACTT
Citrobacter koseri ATCC BAA-895 CKO_03060 -129 3.8 AAATTAAATATCCATCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04229 -162 3.6 TCTTGCGAGCCGGATCGAAAAA
-143 3.9 AAATTTAACAAGCATCACGTTT
Yersinia pestis KIM y0297 -177 3.7 TTCTGCGAGCCAGTTCGAAAAA
-135 3.6 TTATGCAAATTAGGTAACAAAT
Edwardsiella tarda EIB202 ETAE_3434 -258 4.2 AAGTGCGATCGGGATCGAAAAA
-175 3.6 ATATGTGATCATATACTCATCG
Proteus mirabilis HI4320 PMI3218 -207 4.3 TTTTGCGAACTACCTCATAAAA
-189 3.9 AAAAACGATTGGTATCACACTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4760 -213 4.2 ATTTGCGAGCCATATCGAATAA
-195 4.6 ATAAATGATTTATATCACACTT
Position: -139
Score: 3.9
Sequence: TTTTTTGACGACACACACACAT
Locus tag: ETAE_3441
ETAE_3441 -139 3.9 TTTTTTGACGACACACACACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: facilitator for glycerol uptake
Yersinia pestis KIM y0046 -139 4 TTTCATGACGAATAACACATAT
Serratia proteamaculans 568 Spro_4797 -183 4.1 TTTTATGACGAAGCACACACAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4266 -153 4.3 TTTTTTGACGCGCAACACACAT
Edwardsiella tarda EIB202 ETAE_3441 -139 3.9 TTTTTTGACGACACACACACAT
Position: -150
Score: 5
Sequence: TTTTGTGATGAATGTCACGTAT
Position: -98
Score: 3.7
Sequence: AACATAGATCATGATCACATTA
Locus tag: ETAE_3469
ETAE_3469 -150 5 TTTTGTGATGAATGTCACGTAT
-98 3.7 AACATAGATCATGATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aphA
Ortholog function: acid phosphatase/phosphotransferase
Escherichia coli str. K-12 substr. MG1655 b4055 -130 3.6 CATCCTGCTTTTCATCACAAAA
-57 4 TTTTGCAACAAATCTCACAATA
Salmonella typhimurium LT2 STM4249 -139 3.7 TGTTGTGATCATCCTCTTTTTT
Citrobacter koseri ATCC BAA-895 CKO_03845 -255 3.9 TATTGTGAATGCGTGTACAGAA
-224 3.7 GTGTGTGTGGTTTATCACACAT
Enterobacter sp. 638 Ent638_0259 -57 3.8 TTTTTTGACCATTCGCTCAATT
Edwardsiella tarda EIB202 ETAE_3469 -150 5 TTTTGTGATGAATGTCACGTAT
-98 3.7 AACATAGATCATGATCACATTA
Proteus mirabilis HI4320 PMI0729 -148 4.3 AAGTGTTAGATAGATCAAAAAA
-87 4.3 TAACGTGCGCTATATCTCATTT
-34 4.3 TTCTGTGATTAATATAAAAATT
Position: -160
Score: 3.4
Sequence: AATTATGAATAAAAATACAATA
Locus tag: ETAE_3482
ETAE_3482 -160 3.4 AATTATGAATAAAAATACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Salmonella typhimurium LT2 STM4121 -44 3.5 AATTATGAATAAAAATACATTA
Citrobacter koseri ATCC BAA-895 CKO_03036 -110 4 ATTTGTGAATAAAAATACATTA
Enterobacter sp. 638 Ent638_4028 -44 3.8 AAATGTGAATAAAAATACACTA
Yersinia pestis KIM y0310 -43 3.7 TTTATTGACATAAATAAAAATA
Serratia proteamaculans 568 Spro_4781 -167 4 TATTGTGAATAAAAATACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0192 -159 3.5 TATTTTGAATAAAAATACAATA
Edwardsiella tarda EIB202 ETAE_3482 -160 3.4 AATTATGAATAAAAATACAATA
Proteus mirabilis HI4320 PMI3237 -57 3.6 TTTTTTGAATAAAAATACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4744 -59 3.6 TTTTTTGAATAAAAATACATTA
Position: -65
Score: 3.9
Sequence: TATTGTATTTTTATTCATAATT
Position: -35
Score: 3.6
Sequence: AATATTGATACTATCCAAACTT
Locus tag: ETAE_3483
ETAE_3483 -65 3.9 TATTGTATTTTTATTCATAATT
-35 3.6 AATATTGATACTATCCAAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: acetylornithine deacetylase
Escherichia coli str. K-12 substr. MG1655 b3957 -66 3.7 TAGTGTATTTTTATTCATAAAT
Salmonella typhimurium LT2 STM4120 -66 3.9 TAATGTATTTTTATTCATAATT
Citrobacter koseri ATCC BAA-895 CKO_03037 -27 4.3 TAATGTATTTTTATTCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04246 -27 4 TATTGTATTTTTATTCAAAATA
Enterobacter sp. 638 Ent638_4029 -66 4.2 TAGTGTATTTTTATTCACATTT
Erwinia amylovora ATCC 49946 EAM_0137 -66 3.8 TATTGTATTTTTATTCACTATT
Yersinia pestis KIM y0309 -223 3.6 TATTTTTATTTATGTCAATAAA
Serratia proteamaculans 568 Spro_4782 -71 4.3 TATTGTATTTTTATTCACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0191 -65 4 TATTGTATTTTTATTCAAAATA
Edwardsiella tarda EIB202 ETAE_3483 -65 3.9 TATTGTATTTTTATTCATAATT
Proteus mirabilis HI4320 PMI3236 -65 3.9 TAATGTATTTTTATTCAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4745 -65 3.9 TAATGTATTTTTATTCAAAAAA
Position: -267
Score: 4.2
Sequence: GTTTGTGATCCTATTCACGATG
Locus tag: ETAE_3493
ETAE_3493 -267 4.2 GTTTGTGATCCTATTCACGATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: glutamine synthetase
Escherichia coli str. K-12 substr. MG1655 b3870 -269 4.2 CTTTGTGATCGCTTTCACGGAG
Salmonella typhimurium LT2 STM4007 -272 4.2 CTTTGTGATCGCTTTCACGGAG
-114 3.8 CAATGTGAAAGTTGGCACAGAT
Citrobacter koseri ATCC BAA-895 CKO_03140 -250 4.2 CTTTGTGATCGCTTTCACGGAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04178 -299 3.9 CTTTGTGACCGCTTTCACGGAG
Serratia proteamaculans 568 Spro_4881 -267 4 GTATGTGATCCCTTTCACGGTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0029 -265 4.2 CTTTGTGATCCCTTTCACGGTG
Edwardsiella tarda EIB202 ETAE_3493 -267 4.2 GTTTGTGATCCTATTCACGATG
Proteus mirabilis HI4320 PMI2882 -270 4.7 AATTGTGATCCTTTTCACGCCT
-215 3.8 AATTGTGCAACTATTCAGACTT
-181 3.9 ATTTGTGCAATAATTAAAAAAT
Position: -297
Score: 3.7
Sequence: AATCGTGAAAATATTTAAATTA
Locus tag: ETAE_3526
ETAE_3526 -297 3.7 AATCGTGAAAATATTTAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase subunit I
Escherichia coli str. K-12 substr. MG1655 b3739 -263 4.8 ATATGTGATCTGAAGCACGCTT
Salmonella typhimurium LT2 STM3872 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_00079 -262 4.7 ATATGTGATCCGAAGCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04144 -262 4.7 TTATGTGATCTGATGCACGCTT
Enterobacter sp. 638 Ent638_4125 -261 4.8 TTTTGTGATCTCGTGCACGCTT
Erwinia amylovora ATCC 49946 EAM_3481 -264 4.4 ATTTGTGATCGTGGACACGCTT
Yersinia pestis KIM y4142 -263 5.4 TTATGTGATGTATTTCACGTTT
Serratia proteamaculans 568 Spro_0001 -265 4.4 TATTGTGAGCAACTACACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4519 -254 5 TTATGTGAGTCACATCACAGAT
Edwardsiella tarda EIB202 ETAE_3526 -297 3.7 AATCGTGAAAATATTTAAATTA
Proteus mirabilis HI4320 PMI3057 -259 5 TTGTGTGTTCTAGATCACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0047 -265 5.7 TTATGTGATTTAAATCACATTT
© 2009-2020 RegPrecise