Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of UxuR regulog to Edwardsiella tarda EIB202

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella tarda EIB202
Orthologous TF(s) ETAE_2295, ETAE_1037
Regulated genes 5
Built upon 44 sites [see more]
Predicted regulatory interactions in Edwardsiella tarda EIB202
Locus tag Position Score Sequence
Position: -68
Score: 4.2
Sequence: AAAGTGGTATAACAACTC
Locus tag: ETAE_0434
ETAE_0434 -68 4.2 AAAGTGGTATAACAACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuR
Ortholog function: exu regulon transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b3094 -47 4.7 AAAGTGGTATAACAAATA
Yersinia pestis KIM y3602 -105 4.5 TAAGTGGTATAACAAATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0643 -98 4.5 TAAGTGGTATAACAAATC
Edwardsiella tarda EIB202 ETAE_0434 -68 4.2 AAAGTGGTATAACAACTC
Position: -70
Score: 5.1
Sequence: TTATTGGTCAACCAAAAA
Position: -29
Score: 5.8
Sequence: AAATTGGTTGACCAAATG
Locus tag: ETAE_1036
ETAE_1036 -70 5.1 TTATTGGTCAACCAAAAA
-29 5.8 AAATTGGTTGACCAAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntP
Ortholog function: Fructuronate transporter GntP
Escherichia coli str. K-12 substr. MG1655 b4321 -177 5.4 AAATTGGTTAACCACATC
-71 5.6 ACAATGGTTGACCAATTT
Yersinia pestis KIM y3426 -226 5.2 AACTTGGTTAACCAATAC
Edwardsiella tarda EIB202 ETAE_1036 -70 5.1 TTATTGGTCAACCAAAAA
-29 5.8 AAATTGGTTGACCAAATG
Position: -330
Score: 5.3
Sequence: TTTTTGGTTGACCAATAA
Locus tag: ETAE_1037
ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: D-glucuronate repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b4324 -173 5.4 TATTTGGTTGACCAGTTT
Salmonella typhimurium LT2 STM4507 -231 5.9 ATATTGGTAAACCAATAT
-106 5.1 TTGTTGGTTGACCAGTTT
Edwardsiella tarda EIB202 ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0171 -77 5.7 TTTTTGGTTGACCAATTT
Position: -207
Score: 5.6
Sequence: ACATTGGTTAACCAAATA
Locus tag: ETAE_1915
ETAE_1915 -207 5.6 ACATTGGTTAACCAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuT2
Ortholog function: D-glucuronate transporter
Edwardsiella tarda EIB202 ETAE_1915 -207 5.6 ACATTGGTTAACCAAATA
-175 5 AATTTGGCATACCAATAT
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