Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FucR regulog to Edwardsiella tarda EIB202

Reference regulog properties
Source regulog: FucR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: activator
Biological process: Fucose utilization
Effector: L-fuculose-1-phosphate
Phylum: Proteobacteria
Propagated regulon:
Target genome Edwardsiella tarda EIB202
Orthologous TF(s) ETAE_0287
Regulated genes 1
Built upon 16 sites [see more]
Predicted regulatory interactions in Edwardsiella tarda EIB202
Locus tag Position Score Sequence
Position: -312
Score: 6.8
Sequence: ATGACCGAATAGGCATTTTTTATTTTAAACGGTCAA
Locus tag: ETAE_0293
ETAE_0293 -312 6.8 ATGACCGAATAGGCATTTTTTATTTTAAACGGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fucA
Ortholog function: L-fuculose phosphate aldolase (EC 4.1.2.17)
Citrobacter koseri ATCC BAA-895 CKO_04159 -281 7.6 ATGACCGATTTAATTTATTACTGCGAAAACGGGCAT
-225 6 ATGCCCGTTTGGATAAATAATATTAAGAGCGGTCAT
Edwardsiella tarda EIB202 ETAE_0293 -312 6.8 ATGACCGAATAGGCATTTTTTATTTTAAACGGTCAA
Escherichia coli str. K-12 substr. MG1655 b2800 -284 7.3 ATGACCGTATTAATTGTTTGTGCCGAAAACGGTCAT
-225 6.3 ATGACCGTTTTGATAAATATTTTTAAGAGCGGTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03151 -290 7 ATGACCGAATGAATATATATCGTGGAAAACGGGCAA
-236 5.6 ATGCCCGCTTGATGAAATATTATTAAGAACGGGCAT
Salmonella typhimurium LT2 STM2974 -293 7.1 ATGCCCGAATTAAATTATTGCCACGAAAACGGGCAG
-237 6.2 TTGCCCGTTTTAAAAAATATTATTAAGAGCGGGCAT
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