Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of UxuR regulog to Salmonella enterica subsp. enterica serovar Newport str. SL254

Reference regulog properties
Source regulog: UxuR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Glucuronate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Newport str. SL254
Orthologous TF(s) SNSL254_A4861
Regulated genes 4
Built upon 44 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Newport str. SL254
Locus tag Position Score Sequence
Position: -147
Score: 4.5
Sequence: TAATTGATAAACAAATTA
Position: -34
Score: 4.6
Sequence: GAATTGGTAAACAAAAAC
Locus tag: SNSL254_A3329
SNSL254_A3329 -147 4.5 TAATTGATAAACAAATTA
-34 4.6 GAATTGGTAAACAAAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: STM3083
Ortholog function: putative dehydrogenase
Salmonella typhimurium LT2 STM3083 -34 4.4 GAATTGGTAAACAAAACA
Position: -86
Score: 5.3
Sequence: TGATTGGTCAACCAATTT
Locus tag: SNSL254_A3386
SNSL254_A3386 -86 5.3 TGATTGGTCAACCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: exuT2
Ortholog function: D-glucuronate transporter
Salmonella typhimurium LT2 STM3134 -273 5.2 AAATTGGCTAACCAAATC
-86 5.3 TGATTGGTCAACCAATTT
Position: -336
Score: 5.6
Sequence: AAATTGGTTGACCAATCA
Position: -149
Score: 5.2
Sequence: GATTTGGTTAGCCAATTT
Locus tag: SNSL254_A3387
SNSL254_A3387 -336 5.6 AAATTGGTTGACCAATCA
-149 5.2 GATTTGGTTAGCCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b4322 -180 5.4 GATGTGGTTAACCAATTT
Salmonella typhimurium LT2 STM3135 -336 5.6 AAATTGGTTGACCAATCA
-149 5.2 GATTTGGTTAGCCAATTT
Yersinia pestis KIM y2902 -510 4.5 AAgTTGtTagACCAgTTT
-352 4 AAATTGGTaAgtCcAaTa
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1093 -109 5.2 TAATTGGTCAATCAATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0170 -77 5.7 TTTTTGGTTGACCAATTT
Position: -231
Score: 5.4
Sequence: ATATTGGTAAACCAATGT
Locus tag: SNSL254_A4861
SNSL254_A4861 -231 5.4 ATATTGGTAAACCAATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: D-glucuronate repressor, GntR family
Escherichia coli str. K-12 substr. MG1655 b4324 -173 5.4 TATTTGGTTGACCAGTTT
Salmonella typhimurium LT2 STM4507 -231 5.9 ATATTGGTAAACCAATAT
-106 5.1 TTGTTGGTTGACCAGTTT
Edwardsiella tarda EIB202 ETAE_1037 -330 5.3 TTTTTGGTTGACCAATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0171 -77 5.7 TTTTTGGTTGACCAATTT
© 2009-2020 RegPrecise