Propagation of TyrR regulog to Klebsiella pneumoniae 342
| Source regulog: | TyrR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | TyrR |
| Regulation mode: | activator (repressor) |
| Biological process: | Aromatic amino acid metabolism |
| Effector: | Tyrosine; Phenylalanine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Klebsiella pneumoniae 342 |
| Orthologous TF(s) | KPK_5506, KPK_3109 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -127
Score: 4.9 Sequence: GCGTAAAGTAAATAATACAG
Locus tag: KPK_0554
|
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| KPK_0554 | -127 | 4.9 | GCGTAAAGTAAATAATACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtr | ||||
| Ortholog function: Tryptophan-specific transport protein | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03569 | -128 | 4.9 | GCGTAAACTAAATAATACAG |
|
Position: -103
Score: 4.5 Sequence: GCGTAACTATTGCTTTACAC
Locus tag: KPK_1400
|
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| KPK_1400 | -103 | 4.5 | GCGTAACTATTGCTTTACAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ipdC | ||||
| Ortholog function: Indole-3-pyruvate decarboxylase (EC 4.1.1.74) | ||||
| Salmonella typhimurium LT2 | STM2405 | -100 | 4.5 | CTGTAAACATTGTTTTCCAG |
| Citrobacter koseri ATCC BAA-895 | CKO_00409 | -101 | 3.8 | CTGTAAATCCTGCTTTCCAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02740 | -97 | 5 | GCGTAATTATTGCTTTACAC |
|
Position: -110
Score: 5.4 Sequence: GCGTAAAGATAAAATTACAG
Locus tag: KPK_1878
|
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| KPK_1878 | -110 | 5.4 | GCGTAAAGATAAAATTACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tyrP | ||||
| Ortholog function: Tyrosine-specific transport protein | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02404 | -110 | 5.3 | ATGTAAACATTTCATTACAC |
|
Position: -90
Score: 4.2 Sequence: CTGTCAATAATTGTTGACAG
Locus tag: KPK_3109
|
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| KPK_3109 | -90 | 4.2 | CTGTCAATAATTGTTGACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tyrR | ||||
| Ortholog function: Transcriptional regulator of aromatic amino acid biosynthesis | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1323 | -89 | 3.7 | GTGTCAATGATTGTTGACAG |
| Salmonella typhimurium LT2 | STM1683 | -89 | 4.2 | CTGTCAATATTTGTTGACAG |
| Citrobacter koseri ATCC BAA-895 | CKO_01393 | -90 | 4.2 | CTGTCAATAATTGTTGACAG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01305 | -90 | 4.2 | CTGTCAATAATTGTTGACAG |
| Enterobacter sp. 638 | Ent638_2152 | -86 | 3.7 | CTGTCAATATCTGTTGACAG |
| Erwinia amylovora ATCC 49946 | EAM_1834 | -96 | 3.9 | CTGTCAACTTTTCATGACAG |
| Serratia proteamaculans 568 | Spro_2617 | -98 | 3.6 | CTGTCAACTTTTGCTGACAG |
| Proteus mirabilis HI4320 | PMI1369 | -96 | 3.7 | GTGTCAACTTTTGCTGACAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2580 | -178 | 3.7 | TTTTATAATCAATCTTACAA |
|
Position: -79
Score: 4.7 Sequence: CTGTAAGTTTTTATTGACAG
Locus tag: KPK_3603
|
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| KPK_3603 | -79 | 4.7 | CTGTAAGTTTTTATTGACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompF | ||||
| Ortholog function: outer membrane porin F | ||||
| Salmonella typhimurium LT2 | STM0999 | -77 | 4.7 | CTGTAAAGTTTTATTGACGG |
| Enterobacter sp. 638 | Ent638_1448 | -77 | 4.5 | CCGGAAATATTTATTGACAG |
|
Position: -164
Score: 4.6 Sequence: ATGCAATGATAAGTTTACAT
Position: -100
Score: 4.7 Sequence: GTGTAACGTTTTGTTTACGA
Locus tag: KPK_4354
|
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| KPK_4354 | -164 | 4.6 | ATGCAATGATAAGTTTACAT | |
| -100 | 4.7 | GTGTAACGTTTTGTTTACGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroL | ||||
| Ortholog function: Shikimate kinase III (EC 2.7.1.71) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0388 | -182 | 5.6 | ATGTAATTTATTATTTACAC |
| -106 | 5 | GTGGAATTTTTTCTTTACAA | ||
| Salmonella typhimurium LT2 | STM0388 | -181 | 5.4 | ATGTAATGAAAAATTTACAG |
| -107 | 5.8 | GTGTAAATTATTATTTACAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02783 | -238 | 5.4 | ATGTAATGTTATTTTTACAC |
| -163 | 5 | GTGGAATGATTTATTTACAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00332 | -165 | 4.6 | ATGCAATGATAAGTTTACAT |
| -101 | 5.3 | GTGTAATTTTTTCTTTACGT | ||
| Enterobacter sp. 638 | Ent638_0859 | -182 | 4.5 | ATGCAATGATTTCTTTACAG |
| -108 | 4.9 | CTGTAATCCAATTTTTACAA | ||
| Erwinia amylovora ATCC 49946 | EAM_0932 | -126 | 4.5 | CTGTAAATAAAACGTTACTG |
| Yersinia pestis KIM | y0972 | -174 | 5 | GTGTATTATTAATTTTACGT |
| Serratia proteamaculans 568 | Spro_1018 | -122 | 4.9 | TCGTAAATATTGAAATACAG |
| Proteus mirabilis HI4320 | PMI0371 | -57 | 5.5 | TTGTAAATTTTAGATTACAC |
|
Position: -82
Score: 3.9 Sequence: GTGTGCCGTTTTATTTACGA
Position: -60
Score: 3.9 Sequence: TAGTGCTGTTTACTTTACAC
Locus tag: KPK_4746
|
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| KPK_4746 | -82 | 3.9 | GTGTGCCGTTTTATTTACGA | |
| -60 | 3.9 | TAGTGCTGTTTACTTTACAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: COG2814 | ||||
| Ortholog function: Predicted tyrosine transporter, COG2814 family | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03376 | -87 | 4.4 | GAGTATTGAATTGTTTACGA |
| -65 | 4.9 | TAGTAATTTTTGATTTACAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00010 | -82 | 3.9 | GTGTGCCGTTTTATTTACGA |
| -60 | 4.4 | TAGTGATTTTTACTTTACAC | ||
| Enterobacter sp. 638 | Ent638_0572 | -60 | 4.9 | TAGTAATTTTTTCTTTACGA |
| -37 | 4.4 | CTGTAAAATTAAATCAACAA | ||
| Yersinia pestis KIM | y3709 | -68 | 4.2 | TAGTCATGTTAACTTTACAA |
| Serratia proteamaculans 568 | Spro_0690 | -87 | 3.7 | GTGTGAAAATAATTTGCCGT |
| -65 | 4 | TAGTAAGGATTCGTTTACAG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3884 | -90 | 4 | GTGTATAAAAATTTTGCCGA |
| -68 | 5 | TAGTAATTTATACTTTACAC | ||
| Edwardsiella tarda EIB202 | ETAE_0574 | -66 | 3.7 | TTATATTTCTATTTTTGCAA |