Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RutR regulog to Klebsiella pneumoniae 342

Reference regulog properties
Source regulog: RutR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Klebsiella pneumoniae 342
Orthologous TF(s) KPK_3518
Regulated genes 2
Built upon 13 sites [see more]
Predicted regulatory interactions in Klebsiella pneumoniae 342
Locus tag Position Score Sequence
Position: -123
Score: 4.2
Sequence: AGTGGACTGGATGGTCAAAA
Locus tag: KPK_3518
KPK_3518 -123 4.2 AGTGGACTGGATGGTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rutR
Ortholog function: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01039 -123 4.2 AGTGGACTGGATGGTCAAAA
Serratia proteamaculans 568 Spro_1824 -118 5 AACAGACCATTTGGTCAAAA
Position: -181
Score: 6
Sequence: TTTTGACCATCCAGTCCACT
Locus tag: KPK_3520
KPK_3520 -181 6 TTTTGACCATCCAGTCCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rutA
Ortholog function: Pyrimidine oxygenase
Escherichia coli str. K-12 substr. MG1655 b1012 -126 6.2 TTTTGACCGTTTAGTCCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01038 -181 6 TTTTGACCATCCAGTCCACT
Enterobacter sp. 638 Ent638_1525 -185 6.1 TTTTGACCATTCAGTCCACT
Serratia proteamaculans 568 Spro_1823 -187 5.8 TTTTGACCAAATGGTCTGTT
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