Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NsrR regulog to Proteus mirabilis HI4320

Reference regulog properties
Source regulog: NsrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Proteus mirabilis HI4320
Orthologous TF(s) PMI3371
Regulated genes 7
Built upon 73 sites [see more]
Predicted regulatory interactions in Proteus mirabilis HI4320
Locus tag Position Score Sequence
Position: -137
Score: 5.1
Sequence: ATTGCATTTGAAATACTTC
Locus tag: PMI0798
PMI0798 -137 5.1 ATTGCATTTGAAATACTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaR
Ortholog function: uncharacterized protein/domain, possibly involved in tellurite resistance
Citrobacter koseri ATCC BAA-895 CKO_01824 -224 4.6 ATGGTATTTAAAACACATC
Enterobacter sp. 638 Ent638_2121 -81 4.6 GTTGCATAATAAGTGCACC
Proteus mirabilis HI4320 PMI0798 -137 5.1 ATTGCATTTGAAATACTTC
Position: -69
Score: 3.5
Sequence: AATTCAGTTGAATTAGATG
Locus tag: PMI1397
PMI1397 -69 3.5 AATTCAGTTGAATTAGATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodB
Ortholog function: Superoxide dismutase [Fe] (EC 1.15.1.1)
Escherichia coli str. K-12 substr. MG1655 b1656 -217 4.8 GTTGCATTTCAAATATTCG
Salmonella typhimurium LT2 STM1431 -185 4.3 GTTGTATACAAAATATCTT
Enterobacter sp. 638 Ent638_1791 -223 3.9 GTTGCATTCGCAATATAGT
Edwardsiella tarda EIB202 ETAE_1676 -172 4.1 CAGTCAGCTAAAATACACC
Proteus mirabilis HI4320 PMI1397 -69 3.5 AATTCAGTTGAATTAGATG
Position: -260
Score: 4.2
Sequence: AATGTATTTGCTTTGCAAC
Locus tag: PMI1416
PMI1416 -260 4.2 AATGTATTTGCTTTGCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -248 4.1 TAGTCATTTTCAATACAAC
Salmonella typhimurium LT2 STM1369 -248 3.8 TAGTCATTTTCTATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -116 4 TATGCTTATAAAAAGCACT
Enterobacter sp. 638 Ent638_1760 -249 3.8 TAGGCATTATCTATACATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -191 3.9 AATAAATTAAAGATATACC
Position: -61
Score: 5.4
Sequence: GTTGTATTAAAAATACATG
Locus tag: PMI1868
PMI1868 -61 5.4 GTTGTATTAAAAATACATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Escherichia coli str. K-12 substr. MG1655 b2552 -47 5.7 GATGCATTTGAGATACATC
Salmonella typhimurium LT2 STM2556 -79 4.8 GATCCATTTACAATGCAAG
-47 5.8 GATGCATTTGATATACATC
Citrobacter koseri ATCC BAA-895 CKO_00235 -47 5.5 GATGTATTTGACATACATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02877 -47 6.3 GATGCATTTAAAATGCATC
Enterobacter sp. 638 Ent638_3037 -47 6.2 GATGCATATAAAATACATC
Yersinia pestis KIM y1321 -58 6.1 GATGCATTTAAAATACATG
Serratia proteamaculans 568 Spro_3639 -59 6 GATGCATTTAAAATGCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3251 -51 5.9 GATTCATATAAAATACAAC
Edwardsiella tarda EIB202 ETAE_2822 -45 6.2 GTTGCATTTAAAATACAAC
Proteus mirabilis HI4320 PMI1868 -61 5.4 GTTGTATTAAAAATACATG
Photorhabdus luminescens subsp. laumondii TTO1 plu3292 -64 5.4 GTTGCATTTAAATTACATG
Position: -38
Score: 5.8
Sequence: AATGCATTTTAAATGCAAC
Locus tag: PMI1959
PMI1959 -38 5.8 AATGCATTTTAAATGCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygbA
Ortholog function: hypothetical protein involved in nitrosative stress
Escherichia coli str. K-12 substr. MG1655 b2732 -38 5.1 GATGTAATATAAATACATC
Salmonella typhimurium LT2 STM2860 -40 4.4 GGTGTAAAATAAATACACC
Enterobacter sp. 638 Ent638_3209 -39 4.1 GATGTATTATTTATGCACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2415 -39 5.6 ATTGTATTTAAAATGCATC
Proteus mirabilis HI4320 PMI1959 -215 3.7 ATTGTTTGTTAAATAAAAT
-38 5.8 AATGCATTTTAAATGCAAC
Position: -58
Score: 5.3
Sequence: GTTGCATATTTAATGCAAC
Locus tag: PMI2112
PMI2112 -58 5.3 GTTGCATATTTAATGCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Yersinia pestis KIM y2819 -90 4.7 ATTGCATTAAAAATACCTT
-38 5.3 CACGCATTACAAATACAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2662 -38 5.8 CAAGCATTTAAAATGCAAC
Edwardsiella tarda EIB202 ETAE_2215 -37 5.2 CAAGCATAATAAATGCAAC
Proteus mirabilis HI4320 PMI2112 -58 5.3 GTTGCATATTTAATGCAAC
Position: -36
Score: 6.1
Sequence: GATGTATTTAAAATGCATC
Locus tag: PMI2116
PMI2116 -36 6.1 GATGTATTTAAAATGCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tehB
Ortholog function: Tellurite resistance protein TehB
Escherichia coli str. K-12 substr. MG1655 b1430 -47 5.4 AATGCATTTCAAATATACT
Salmonella typhimurium LT2 STM1608 -35 5.4 AATGCATTTCAAATATACT
Citrobacter koseri ATCC BAA-895 CKO_01467 -35 5.6 AATGCATTTAAAATATACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01940 -47 5 GGTTCCTTTAAAATGCAAC
Enterobacter sp. 638 Ent638_1975 -35 5.2 CTAGCATTTCAAATATAAT
Proteus mirabilis HI4320 PMI2116 -36 6.1 GATGTATTTAAAATGCATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3742 -39 5.7 GATGCATTTTAAATGTAAT
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