Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FetR regulog to Roseiflexus castenholzii DSM 13941

Reference regulog properties
Source regulog: FetR - Chloroflexia
Regulator type: Transcription factor
Regulator family: DtxR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Chloroflexi
Propagated regulon:
Target genome Roseiflexus castenholzii DSM 13941
Orthologous TF(s) Rcas_4363
Regulated genes 3
Built upon 13 sites [see more]
Predicted regulatory interactions in Roseiflexus castenholzii DSM 13941
Locus tag Position Score Sequence
Position: -98
Score: 6.3
Sequence: TTATTAGCATATGCTAACAT
Locus tag: Rcas_0821
Rcas_0821 -98 6.3 TTATTAGCATATGCTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: RoseRS_4469
Ortholog function: hypothetical protein
Roseiflexus sp. RS-1 RoseRS_4469 -141 6 TTATTAGGATATGCTAACCA
Roseiflexus castenholzii DSM 13941 Rcas_0821 -98 6.3 TTATTAGCATATGCTAACAT
Chloroflexus sp. Y-400-fl Chy400_0685 -92 5.8 TTATTAGAGTATGCTAACCG
Position: -159
Score: 5.5
Sequence: ATGTTAGAGTAACCTAACAC
Locus tag: Rcas_3171
Rcas_3171 -159 5.5 ATGTTAGAGTAACCTAACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbpA
Ortholog function: Ferric iron ABC transporter, periplasmic-binding protein
Roseiflexus sp. RS-1 RoseRS_2294 -157 6 ATGTTAGAGTAATCTAACAA
Roseiflexus castenholzii DSM 13941 Rcas_3171 -159 5.5 ATGTTAGAGTAACCTAACAC
Position: -123
Score: 5.9
Sequence: TTATTAGACTATACTAACTT
Locus tag: Rcas_4373
Rcas_4373 -123 5.9 TTATTAGACTATACTAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuV
Ortholog function: Heme ABC transporter, ATPase component HmuV
Roseiflexus sp. RS-1 RoseRS_3564 -109 6 TTATTAGACTATACTAACCA
Roseiflexus castenholzii DSM 13941 Rcas_4373 -123 5.9 TTATTAGACTATACTAACTT
Chloroflexus sp. Y-400-fl Chy400_2616 -57 5.8 AAATTAGAGTATTCTAATAG
Chloroflexus aggregans DSM 9485 Cagg_3308 -57 6 AAATTAGTATATTCTAACTT