Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NrdR regulog to Roseiflexus castenholzii DSM 13941

Reference regulog properties
Source regulog: NrdR - Chloroflexia
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Chloroflexi
Propagated regulon:
Target genome Roseiflexus castenholzii DSM 13941
Orthologous TF(s) Rcas_3251
Regulated genes 1
Built upon 8 sites [see more]
Predicted regulatory interactions in Roseiflexus castenholzii DSM 13941
Locus tag Position Score Sequence
Position: -334
Score: 4.2
Sequence: ATACCGGATTTAGTTC
Position: -219
Score: 4.2
Sequence: GCGCCATATTTAGGAA
Locus tag: Rcas_0124
Rcas_0124 -334 4.2 ATACCGGATTTAGTTC
-219 4.2 GCGCCATATTTAGGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdJ
Ortholog function: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Roseiflexus sp. RS-1 RoseRS_4577 -213 4.4 GCGCTATATTTAGGAA
Roseiflexus castenholzii DSM 13941 Rcas_0124 -334 4.2 ATACCGGATTTAGTTC
-219 4.2 GCGCCATATTTAGGAA
Herpetosiphon aurantiacus ATCC 23779 Haur_4766 -326 4.8 ATACTATATATTGGAT