Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NrtR regulog to Roseiflexus castenholzii DSM 13941

Reference regulog properties
Source regulog: NrtR - Chloroflexia
Regulator type: Transcription factor
Regulator family: NrtR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: Adenosine diphosphate ribose
Phylum: Chloroflexi
Propagated regulon:
Target genome Roseiflexus castenholzii DSM 13941
Orthologous TF(s) Rcas_0387
Regulated genes 4
Built upon 27 sites [see more]
Predicted regulatory interactions in Roseiflexus castenholzii DSM 13941
Locus tag Position Score Sequence
Position: -70
Score: 5.7
Sequence: TTATTGTTGTAATGACACTAA
Locus tag: Rcas_0387
Rcas_0387 -70 5.7 TTATTGTTGTAATGACACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrtR
Ortholog function: Nudix-related transcriptional regulator NrtR
Chloroflexus aggregans DSM 9485 Cagg_0305 -47 6 TTAGTGTATTACTAACACTAA
Chloroflexus sp. Y-400-fl Chy400_3450 -47 6.1 TTAGTGTATAAATAACACTAA
Herpetosiphon aurantiacus ATCC 23779 Haur_4290 -32 6 TTTGTGTCATAATAACACTAT
Roseiflexus castenholzii DSM 13941 Rcas_0387 -70 5.7 TTATTGTTGTAATGACACTAA
Roseiflexus sp. RS-1 RoseRS_0145 -34 5.5 TTATTGTTGCAATGACACTAA
Position: -11
Score: 6.6
Sequence: ATAGTGTAAAAATGACACTAA
Locus tag: Rcas_1005
Rcas_1005 -11 6.6 ATAGTGTAAAAATGACACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadC
Ortholog function: Quinolinate phosphoribosyltransferase (EC 2.4.2.19)
Chloroflexus aggregans DSM 9485 Cagg_1774 -90 5.2 TTAGTGACCTCTTGACAATAT
-35 6.3 AAAGTGTAACAATAACACTAA
Roseiflexus castenholzii DSM 13941 Rcas_1005 -65 6.2 ATAGAGTAACATTGACACTAA
-11 6.6 ATAGTGTAAAAATGACACTAA
Roseiflexus sp. RS-1 RoseRS_0439 -65 6.2 ATAGAGTAACATTGACACTAA
-11 6.6 ATAGTGTAAAAATGACACTAA
Position: -39
Score: 5.8
Sequence: ATAGTGTCAATATCACAATAA
Locus tag: Rcas_1635
Rcas_1635 -39 5.8 ATAGTGTCAATATCACAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pncB
Ortholog function: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Roseiflexus castenholzii DSM 13941 Rcas_1635 -39 5.8 ATAGTGTCAATATCACAATAA
Roseiflexus sp. RS-1 RoseRS_1316 -41 6.1 ATAGTGTCAATATAACAATAA
Position: -53
Score: 6.1
Sequence: AAAGTGTTATACTAACACTAA
Locus tag: Rcas_2204
Rcas_2204 -53 6.1 AAAGTGTTATACTAACACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadE
Ortholog function: NAD synthetase (EC 6.3.1.5)
Roseiflexus castenholzii DSM 13941 Rcas_2204 -53 6.1 AAAGTGTTATACTAACACTAA
Roseiflexus sp. RS-1 RoseRS_2679 -59 5.8 AAAGTGTTATACTGACACCAA
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