Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Caur_3587 regulog to Roseiflexus sp. RS-1

Reference regulog properties
Source regulog: Caur_3587 - Chloroflexia
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process:
Effector:
Phylum: Chloroflexi
Propagated regulon:
Target genome Roseiflexus sp. RS-1
Orthologous TF(s) RoseRS_1223
Regulated genes 2
Built upon 11 sites [see more]
Predicted regulatory interactions in Roseiflexus sp. RS-1
Locus tag Position Score Sequence
Position: -22
Score: 6.5
Sequence: ATATTGACATTCTTCAATAT
Locus tag: RoseRS_1223
RoseRS_1223 -22 6.5 ATATTGACATTCTTCAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Caur_3587
Ortholog function: transcriptional regulator, ArsR family
Herpetosiphon aurantiacus ATCC 23779 Haur_0112 -50 5.5 ATATTGAATTAATTCGATAA
Roseiflexus castenholzii DSM 13941 Rcas_2310 -52 6.6 ATATTGACAATCTTCAATAT
Roseiflexus sp. RS-1 RoseRS_1223 -22 6.5 ATATTGACATTCTTCAATAT
Position: -71
Score: 6.5
Sequence: ATATTGATGATCTTCAATAT
Locus tag: RoseRS_1224
RoseRS_1224 -71 6.5 ATATTGATGATCTTCAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ubiE
Ortholog function: SAM-dependent methyltransferase DSY4148 (UbiE paralog)
Roseiflexus sp. RS-1 RoseRS_1224 -71 6.5 ATATTGATGATCTTCAATAT
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