Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rcas_3562 regulog to Roseiflexus sp. RS-1

Reference regulog properties
Source regulog: Rcas_3562 - Chloroflexia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Alpha-galactosides utilization
Effector:
Phylum: Chloroflexi
Propagated regulon:
Target genome Roseiflexus sp. RS-1
Orthologous TF(s) RoseRS_1355
Regulated genes 1
Built upon 2 sites [see more]
Predicted regulatory interactions in Roseiflexus sp. RS-1
Locus tag Position Score Sequence
Position: -47
Score: 7.1
Sequence: TGTCCTGCATCCTATGCAATAAGACA
Locus tag: RoseRS_1355
RoseRS_1355 -47 7.1 TGTCCTGCATCCTATGCAATAAGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Rcas_3562
Ortholog function: Transcriptional regulator, GntR family
Roseiflexus castenholzii DSM 13941 Rcas_3562 -44 7.4 TGTCTTATATCCTATGCCATAGGACA
Roseiflexus sp. RS-1 RoseRS_1355 -47 7.1 TGTCCTGCATCCTATGCAATAAGACA