Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Roseiflexus sp. RS-1

Reference regulog properties
Source regulog: Zur - Chloroflexia
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Chloroflexi
Propagated regulon:
Target genome Roseiflexus sp. RS-1
Orthologous TF(s) RoseRS_1293
Regulated genes 3
Built upon 19 sites [see more]
Predicted regulatory interactions in Roseiflexus sp. RS-1
Locus tag Position Score Sequence
Position: -124
Score: 5.5
Sequence: TATAAAAACGAAGTATCAATA
Locus tag: RoseRS_1258
RoseRS_1258 -124 5.5 TATAAAAACGAAGTATCAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, periplasmic-binding protein ZnuA
Chloroflexus aggregans DSM 9485 Cagg_2043 -35 5.9 AATTGAAACATAGTTTCATTA
Chloroflexus sp. Y-400-fl Chy400_2148 -35 6.1 TTTTGAAACAATGTTTCATTA
Roseiflexus castenholzii DSM 13941 Rcas_1591 -122 5.3 TATCCATACCACATATCAATA
Herpetosiphon aurantiacus ATCC 23779 Haur_2064 -95 6.2 TAATGATACAAAATATCATTA
Roseiflexus sp. RS-1 RoseRS_1258 -124 5.5 TATAAAAACGAAGTATCAATA
Position: -39
Score: 4.5
Sequence: AACTGATATGATCTATCATTT
Locus tag: RoseRS_3105
RoseRS_3105 -39 4.5 AACTGATATGATCTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone involved in Zn homeostasis, COG0523 family
Chloroflexus aggregans DSM 9485 Cagg_0608 -79 5.8 TAATGATATAACGTATCATTT
-20 4.5 AATCGAGATAAGGTATCAATG
Roseiflexus castenholzii DSM 13941 Rcas_2945 -58 4.3 CATTGATATACACTATCATCA
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