Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HrcA regulog to Roseiflexus sp. RS-1

Reference regulog properties
Source regulog: HrcA - Chloroflexia
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Chloroflexi
Propagated regulon:
Target genome Roseiflexus sp. RS-1
Orthologous TF(s) RoseRS_3462
Regulated genes 2
Built upon 16 sites [see more]
Predicted regulatory interactions in Roseiflexus sp. RS-1
Locus tag Position Score Sequence
Position: -190
Score: 7.1
Sequence: CTAGCACTCAATAGTCGAGAGTGCTAA
Locus tag: RoseRS_3462
RoseRS_3462 -190 7.1 CTAGCACTCAATAGTCGAGAGTGCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hrcA
Ortholog function: Heat-inducible transcription repressor HrcA
Chloroflexus aggregans DSM 9485 Cagg_2696 -55 7.6 TTAGCACTCTCGCCTCACGAGTGCTAA
Chloroflexus sp. Y-400-fl Chy400_2238 -55 7.4 TTAGCACTCTCACCTCACGAGTGCTAA
Roseiflexus castenholzii DSM 13941 Rcas_4390 -102 7.2 CTAGCACTCACCGGTCGAGAGTGCTAA
Herpetosiphon aurantiacus ATCC 23779 Haur_0438 -40 7.3 TTAGCACTCCTCGGCCAAGAGTGCTAA
Roseiflexus sp. RS-1 RoseRS_3462 -190 7.1 CTAGCACTCAATAGTCGAGAGTGCTAA
Position: -75
Score: 7.8
Sequence: TTAGCACTCTTCCGTCGAGAGTGCTAA
Locus tag: RoseRS_4130
RoseRS_4130 -75 7.8 TTAGCACTCTTCCGTCGAGAGTGCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: groES
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Chloroflexus aggregans DSM 9485 Cagg_0489 -154 6 TTAGCACTCAGTTTCGACGAGTGCTAA
-81 7.6 TTAGCACTCTTGAGTTAACAGTGCTAA
Chloroflexus sp. Y-400-fl Chy400_2961 -156 6 CTAGCAATCTCTAACGTCGAGTGCTAA
-83 7.4 TTAGCACTCTCGACGTGACAGTGCTAA
Roseiflexus castenholzii DSM 13941 Rcas_1212 -145 6.4 CTGGCACTCTCATCTGGCGAGTGCTAA
-72 7.7 TTAGCACTCTTTGGTCAAGAGTGCTAA
Herpetosiphon aurantiacus ATCC 23779 Haur_3678 -231 6.2 TTAGCACTCTCGCCACGATTTTGCTAA
-129 7.2 TTAGCACTCTCAACCCAAGAGTGATAA
-54 6.8 TTAGCACTCATCACAGTAGATTGCTAA
Roseiflexus sp. RS-1 RoseRS_4130 -148 6.4 CTGGCACTCTTCCCTTTTGAGTGCTAA
-75 7.8 TTAGCACTCTTCCGTCGAGAGTGCTAA
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