Propagation of LexA regulog to Roseiflexus sp. RS-1

Reference regulog properties
Source regulog:	LexA - Chloroflexia
Regulator type:	Transcription factor
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Phylum:	Chloroflexi
Propagated regulon:
Target genome	Roseiflexus sp. RS-1
Orthologous TF(s)	RoseRS_0427
Regulated genes	10

Built upon 52 sites [see more]

Predicted regulatory interactions in *Roseiflexus sp. RS-1*
	Locus tag	Position	Score	Sequence
Position: -86 Score: 4.1 Sequence: ACGAACACCCGTTCAC Locus tag: RoseRS_0046
	RoseRS_0046	-86	4.1	ACGAACACCCGTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Cagg_3684
Ortholog function: Conserved hypothetical protein
Chloroflexus aggregans DSM 9485	Cagg_3684	-90	5.1	TCGAACATGTGTGCAA
Chloroflexus sp. Y-400-fl	Chy400_3255	-85	4.4	TAGAACATATGAACTA
Roseiflexus castenholzii DSM 13941	Rcas_4196	-86	4.3	TCGAACACACGTTCAT
Roseiflexus sp. RS-1	RoseRS_0046	-86	4.1	ACGAACACCCGTTCAC
Herpetosiphon aurantiacus ATCC 23779	Haur_4373	-166	4.9	TCGAAAATTTGTGCTA

Position: -115 Score: 4.3 Sequence: TGGAACATGCATGCTA Locus tag: RoseRS_0828
	RoseRS_0828	-115	4.3	TGGAACATGCATGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssb
Ortholog function: Single-stranded DNA-binding protein
Chloroflexus aggregans DSM 9485	Cagg_2703	-88	4.5	TAGCACAATAGTTCGA
Chloroflexus sp. Y-400-fl	Chy400_0945	-88	4.6	TCGCACAATAGTTCGA
Roseiflexus castenholzii DSM 13941	Rcas_0027	-114	4.3	TGGAACATGCATGCTA
Roseiflexus sp. RS-1	RoseRS_0828	-115	4.3	TGGAACATGCATGCTA
Herpetosiphon aurantiacus ATCC 23779	Haur_4110	-8	4.7	TAGAATATATGTTCTA

Position: -34 Score: 4.2 Sequence: ACGCGCATCTGTTCGA Locus tag: RoseRS_0905
	RoseRS_0905	-34	4.2	ACGCGCATCTGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sbcC
Ortholog function: Exonuclease SbcC
Roseiflexus castenholzii DSM 13941	Rcas_4093	-32	4.1	GCGCGCATCTGTTCGA
Roseiflexus sp. RS-1	RoseRS_0905	-34	4.2	ACGCGCATCTGTTCGA
Herpetosiphon aurantiacus ATCC 23779	Haur_3179	-35	4.3	TAGCAAATTTGTACGC

Position: -166 Score: 4.2 Sequence: TCGACAACCTGTGCGC Position: -24 Score: 4.7 Sequence: CCGCACACGTGTGCGG Locus tag: RoseRS_2425
	RoseRS_2425	-166	4.2	TCGACAACCTGTGCGC
		-24	4.7	CCGCACACGTGTGCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ruvB
Ortholog function: Holliday junction DNA helicase RuvB
Chloroflexus aggregans DSM 9485	Cagg_0868	-37	4.8	GCGTACACCTGTGCGA
Chloroflexus sp. Y-400-fl	Chy400_3332	-37	4.8	GCGTACACCTGTGCGA
Roseiflexus castenholzii DSM 13941	Rcas_3053	-24	4.7	CCGCACACGTGTGCGG
Roseiflexus sp. RS-1	RoseRS_2425	-24	4.7	CCGCACACGTGTGCGG
Herpetosiphon aurantiacus ATCC 23779	Haur_2295	-37	4	GCGACCGTCTGTGCTA

Position: -40 Score: 4.6 Sequence: CCGAACACCTGTGCAG Locus tag: RoseRS_2821
	RoseRS_2821	-40	4.6	CCGAACACCTGTGCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: parB
Ortholog function: Chromosome partitioning protein ParB
Chloroflexus aggregans DSM 9485	Cagg_0177	-73	4.6	TGGTACACTTGTTCGG
Chloroflexus sp. Y-400-fl	Chy400_2955	-74	4.5	TGGCACAATTGTTCGG
Roseiflexus castenholzii DSM 13941	Rcas_2543	-83	4.6	CCGAACATCTGTACTG
Roseiflexus sp. RS-1	RoseRS_2821	-40	4.6	CCGAACACCTGTGCAG
Herpetosiphon aurantiacus ATCC 23779	Haur_3186	-58	4	CAGAATAGGTGTGCTA

Position: -135 Score: 4.9 Sequence: TAGAACAAATGTTCGA Locus tag: RoseRS_3028
	RoseRS_3028	-135	4.9	TAGAACAAATGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Cagg_1574
Ortholog function: Conserved hypothetical protein
Chloroflexus sp. Y-400-fl	Chy400_2036	-177	5.2	TAGAACACTTGTTCTA
Roseiflexus castenholzii DSM 13941	Rcas_2146	-129	4.7	TAGAACACATGTTCTT
Roseiflexus sp. RS-1	RoseRS_3028	-135	4.9	TAGAACAAATGTTCGA

Position: -137 Score: 5 Sequence: TAGCCCACTTGTGCGA Locus tag: RoseRS_3118
	RoseRS_3118	-137	5	TAGCCCACTTGTGCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Chloroflexus aggregans DSM 9485	Cagg_1747	-126	5.1	TCGTACACTTGTGCTA
		-107	4.8	TAGCACATATGTACGG
Chloroflexus sp. Y-400-fl	Chy400_1482	-126	5.3	TCGCACACCTGTGCTA
		-107	4.8	TAGCACATATGTACGG
Roseiflexus castenholzii DSM 13941	Rcas_2960	-137	5	TAGCCCACTTGTGCGA
		-120	4.3	AAGAACCTTCGTGCTA
Roseiflexus sp. RS-1	RoseRS_3118	-137	5	TAGCCCACTTGTGCGA
		-120	4.3	AAGAACCTTCGTGCTA
Herpetosiphon aurantiacus ATCC 23779	Haur_4194	-91	4.7	ACGAACAAGTGTGCTA

Position: -103 Score: 4 Sequence: TCGCACGTCTGTTCAT Locus tag: RoseRS_3438
	RoseRS_3438	-103	4	TCGCACGTCTGTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrA
Ortholog function: Excinuclease ABC subunit A
Roseiflexus castenholzii DSM 13941	Rcas_4419	-107	4.7	TCGCACACCTGTTCAC
Roseiflexus sp. RS-1	RoseRS_3438	-103	4	TCGCACGTCTGTTCAT

Position: -47 Score: 4.7 Sequence: TAGAACATCGGTACGA Locus tag: RoseRS_3706
	RoseRS_3706	-47	4.7	TAGAACATCGGTACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mutS
Ortholog function: DNA mismatch repair protein MutS
Roseiflexus castenholzii DSM 13941	Rcas_3531	-42	4.7	TAGAACATCGGTACGA
Roseiflexus sp. RS-1	RoseRS_3706	-47	4.7	TAGAACATCGGTACGA

Position: -34 Score: 4.4 Sequence: TCGCATACGTGTTCGC Locus tag: RoseRS_4548
	RoseRS_4548	-34	4.4	TCGCATACGTGTTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mutL
Ortholog function: DNA mismatch repair protein MutL
Roseiflexus castenholzii DSM 13941	Rcas_0100	-33	4.3	TCGCATACGTGTTCGT
Roseiflexus sp. RS-1	RoseRS_4548	-34	4.4	TCGCATACGTGTTCGC
Herpetosiphon aurantiacus ATCC 23779	Haur_2999	-76	4.3	TAGCTCATTTATGCTA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of LexA regulog to Roseiflexus sp. RS-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --