Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LexA regulog to Thermomicrobium roseum DSM 5159

Reference regulog properties
Source regulog: LexA - Chloroflexia
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Chloroflexi
Propagated regulon:
Target genome Thermomicrobium roseum DSM 5159
Orthologous TF(s) trd_0666
Regulated genes 2
Built upon 52 sites [see more]
Predicted regulatory interactions in Thermomicrobium roseum DSM 5159
Locus tag Position Score Sequence
Position: -50
Score: 4.8
Sequence: TCGAACATGGGTTCTA
Locus tag: trd_0188
trd_0188 -50 4.8 TCGAACATGGGTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombinase A
Chloroflexus aggregans DSM 9485 Cagg_1747 -126 5.1 TCGTACACTTGTGCTA
-107 4.8 TAGCACATATGTACGG
Chloroflexus sp. Y-400-fl Chy400_1482 -126 5.3 TCGCACACCTGTGCTA
-107 4.8 TAGCACATATGTACGG
Roseiflexus castenholzii DSM 13941 Rcas_2960 -137 5 TAGCCCACTTGTGCGA
-120 4.3 AAGAACCTTCGTGCTA
Roseiflexus sp. RS-1 RoseRS_3118 -137 5 TAGCCCACTTGTGCGA
-120 4.3 AAGAACCTTCGTGCTA
Herpetosiphon aurantiacus ATCC 23779 Haur_4194 -91 4.7 ACGAACAAGTGTGCTA
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