Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NrtR regulog to Chloroflexus sp. Y-400-fl

Reference regulog properties
Source regulog: NrtR - Chloroflexia
Regulator type: Transcription factor
Regulator family: NrtR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: Adenosine diphosphate ribose
Phylum: Chloroflexi
Propagated regulon:
Target genome Chloroflexus sp. Y-400-fl
Orthologous TF(s) Chy400_3450
Regulated genes 4
Built upon 27 sites [see more]
Predicted regulatory interactions in Chloroflexus sp. Y-400-fl
Locus tag Position Score Sequence
Position: -35
Score: 5.8
Sequence: TTAGTGTATAATTTACACTAT
Locus tag: Chy400_0205
Chy400_0205 -35 5.8 TTAGTGTATAATTTACACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pncB
Ortholog function: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Chloroflexus aggregans DSM 9485 Cagg_0100 -34 6.1 AAAGTGTAATAATTACACTAT
Chloroflexus sp. Y-400-fl Chy400_0205 -35 5.8 TTAGTGTATAATTTACACTAT
Herpetosiphon aurantiacus ATCC 23779 Haur_3381 -54 5.9 TTAGTGTATTATAGACACTAA
Position: -36
Score: 6.4
Sequence: AAAGTGTAATAATAACACTAA
Locus tag: Chy400_1521
Chy400_1521 -36 6.4 AAAGTGTAATAATAACACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nadA
Ortholog function: Quinolinate synthetase (EC 4.1.99.-)
Chloroflexus aggregans DSM 9485 Cagg_1772 -90 5.2 TTAGTGACCTCTTGACAATAT
-35 6.3 AAAGTGTAACAATAACACTAA
Chloroflexus sp. Y-400-fl Chy400_1521 -90 5.2 TTAGTGACCTCTTGACAATAT
-36 6.4 AAAGTGTAATAATAACACTAA
Herpetosiphon aurantiacus ATCC 23779 Haur_1289 -136 5.5 AAATTGTCATCTTGACACTAC
-110 5.4 ATTGTGTTAGAATGACATTAT
-49 6.2 ATAGTGTCAAAATGACACTTA
Roseiflexus castenholzii DSM 13941 Rcas_1004 -65 6.2 ATAGAGTAACATTGACACTAA
-11 6.6 ATAGTGTAAAAATGACACTAA
Roseiflexus sp. RS-1 RoseRS_0438 -65 6.2 ATAGAGTAACATTGACACTAA
-11 6.6 ATAGTGTAAAAATGACACTAA
Position: -47
Score: 6.1
Sequence: TTAGTGTATAAATAACACTAA
Locus tag: Chy400_3450
Chy400_3450 -47 6.1 TTAGTGTATAAATAACACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrtR
Ortholog function: Nudix-related transcriptional regulator NrtR
Chloroflexus aggregans DSM 9485 Cagg_0305 -47 6 TTAGTGTATTACTAACACTAA
Chloroflexus sp. Y-400-fl Chy400_3450 -47 6.1 TTAGTGTATAAATAACACTAA
Herpetosiphon aurantiacus ATCC 23779 Haur_4290 -32 6 TTTGTGTCATAATAACACTAT
Roseiflexus castenholzii DSM 13941 Rcas_0387 -70 5.7 TTATTGTTGTAATGACACTAA
Roseiflexus sp. RS-1 RoseRS_0145 -34 5.5 TTATTGTTGCAATGACACTAA
Position: -37
Score: 5.7
Sequence: ATAGTGTCAGTTTTACACCAA
Locus tag: Chy400_4233
Chy400_4233 -37 5.7 ATAGTGTCAGTTTTACACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pncA
Ortholog function: Nicotinamidase (EC 3.5.1.19)
Chloroflexus aggregans DSM 9485 Cagg_0030 -37 5.7 ATAGTGTCAGTTTTACACTAC
Chloroflexus sp. Y-400-fl Chy400_4233 -37 5.7 ATAGTGTCAGTTTTACACCAA
Herpetosiphon aurantiacus ATCC 23779 Haur_4288 -32 6 TTTGTGTCATAATAACACTAT
Roseiflexus castenholzii DSM 13941 Rcas_0388 -70 5.7 TTATTGTTGTAATGACACTAA
Roseiflexus sp. RS-1 RoseRS_0144 -34 5.5 TTATTGTTGCAATGACACTAA
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