Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Bacillus pseudofirmus OF4

Reference regulog properties
Source regulog: Fur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pseudofirmus OF4
Orthologous TF(s) BpOF4_14740
Regulated genes 10
Built upon 200 sites [see more]
Predicted regulatory interactions in Bacillus pseudofirmus OF4
Locus tag Position Score Sequence
Position: -131
Score: 4
Sequence: AAAGAGAAGGATTGTGAAT
Locus tag: BpOF4_05465
BpOF4_05465 -131 4 AAAGAGAAGGATTGTGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH0612
Ortholog function: Nitrate/nitrite transporter
Bacillus halodurans C-125 BH0612 -62 4.1 ACTAATTATAATAATCAGA
Position: -89
Score: 6.4
Sequence: ATTGATAATGAATATCATT
Position: -61
Score: 5.9
Sequence: AATGATAACGAATATCAAT
Locus tag: BpOF4_07410
BpOF4_07410 -89 6.4 ATTGATAATGAATATCATT
-61 5.9 AATGATAACGAATATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yclN
Ortholog function: Iron compound ABC uptake transporter permease protein
Bacillus subtilis subsp. subtilis str. 168 BSU03800 -98 6.4 AATGATAATGATAATCAAT
-92 4.9 AATGATAATCAATTACTAT
Bacillus amyloliquefaciens FZB42 RBAM_004050 -87 5.9 GTTGATAATGATAATCATT
Bacillus pumilus SAFR-032 BPUM_0984 -57 6.4 ATTGATAATGATAATCATT
Bacillus licheniformis DSM 13 BLi00463 -46 6.4 ATTGATAATGATaATCAtT
Bacillus cereus ATCC 14579 BC5105 -107 6.5 AATGAAAATGATTATCAAT
Bacillus halodurans C-125 BH1025 -71 6.1 AATGATAATGCTTATCATT
-49 6.2 ACTGATAATGATTATCACT
Bacillus clausii KSM-K16 ABC2895 -129 4.5 AGCGAGATTCTTTCTCATT
-68 6.2 ATTGATAATGAGTATCATT
Oceanobacillus iheyensis HTE831 OB0539 -61 5.2 CTTAATAATGATAATCATT
-55 6.5 AATGATAATCATTTTCAAT
Position: -60
Score: 5.9
Sequence: ATTGAAAATGATTATCTAT
Locus tag: BpOF4_08900
BpOF4_08900 -60 5.9 ATTGAAAATGATTATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yetG
Ortholog function: Putative monooxygenase
Bacillus amyloliquefaciens FZB42 RBAM_007300 -47 5.8 TTTGAGAATCATTTTCATT
Bacillus cereus ATCC 14579 BC2969 -65 5.9 ATTGAAAATAATTATCATA
-59 4.8 AATAATTATCATAATCAAC
Bacillus halodurans C-125 BH3883 -54 6 TTTGATAATGATAATCAAT
-48 6 AATGATAATCAATATCAAA
Bacillus clausii KSM-K16 ABC1946 -52 6 AATGAGAATCGTTATCAAT
Position: -52
Score: 5.9
Sequence: ATTGAGAATGAGTATCAAT
Locus tag: BpOF4_08925
BpOF4_08925 -52 5.9 ATTGAGAATGAGTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhbC
Ortholog function: Rhizobactin siderophore biosynthesis protein
Bacillus clausii KSM-K16 ABC1947 -42 5.5 ATTGAGAATAAATCTCATT
Position: -100
Score: 6.2
Sequence: ATTGACAATGATTATCAAT
Position: -54
Score: 5.7
Sequence: AATGAGAATGAAAATCATT
Locus tag: BpOF4_09125
BpOF4_09125 -100 6.2 ATTGACAATGATTATCAAT
-54 5.7 AATGAGAATGAAAATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: futB
Ortholog function: Ferric iron ABC transporter, iron-binding protein
Bacillus halodurans C-125 BH0513 -98 5.3 GTTGACAACGATTATCATT
-92 5.5 AACGATTATCATTCTCAAT
Position: -56
Score: 6.4
Sequence: ATTGATTATCATTATCAAT
Locus tag: BpOF4_09555
BpOF4_09555 -56 6.4 ATTGATTATCATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywjA
Ortholog function: Multidrug resistance ABC transporter ATP-binding and permease protein
Bacillus subtilis subsp. subtilis str. 168 BSU37230 -44 5.4 ATTGAGAAATATTATCAGT
Bacillus amyloliquefaciens FZB42 RBAM_034370 -47 5.7 ATTGAGAAATATTATCATT
Bacillus pumilus SAFR-032 BPUM_3379 -46 6.5 ATTGAAAATGATTATCAAT
Bacillus cereus ATCC 14579 BC5182 -57 5.9 TTTGATAATGGTTATCATT
Bacillus halodurans C-125 BH3891 -52 6.1 ATTGAGAATGAATATCAAT
Paenibacillus sp. JDR-2 Pjdr2_0424 -137 5.9 TATGATAATGATTATCAAC
Position: -84
Score: 4.9
Sequence: AATAATAATCATTATTGAT
Locus tag: BpOF4_14740
BpOF4_14740 -84 4.9 AATAATAATCATTATTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: Transcriptional regulator for iron transport and metabolism, Fur family
Bacillus amyloliquefaciens FZB42 RBAM_021640 -118 4.8 TTTTAGAATGATTATCACA
Bacillus pumilus SAFR-032 BPUM_2084 -78 4.7 ATTTAAAATGATTATAGTT
Bacillus licheniformis DSM 13 BLi02503 -119 5 ATTTATAATGATTATTAAA
-79 4.9 ATTTATAATGATTATAGTT
Geobacillus kaustophilus HTA426 GK2317 -102 5.3 TATAATAACCATTATCATT
Bacillus cereus ATCC 14579 BC4091 -101 5.8 TTTGAGAATAATTATCAAT
Bacillus halodurans C-125 BH1527 -103 4.7 ACTAATAATAATTATCTGT
-79 5.4 AATAATAATCATTATTAAT
Bacillus clausii KSM-K16 ABC1780 -102 4.9 AATGATATTCATTTGCAGA
Oceanobacillus iheyensis HTE831 OB1849 -96 4.8 TATTATAATTATTATAATT
Paenibacillus sp. JDR-2 Pjdr2_1270 -77 5.1 AATTATAATCATTCTAAAT
Position: -54
Score: 6.5
Sequence: ATTGATAATGATTTTCATT
Locus tag: BpOF4_16305
BpOF4_16305 -54 6.5 ATTGATAATGATTTTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ddc
Ortholog function: Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase
Bacillus pumilus SAFR-032 BPUM_1020 -36 6.2 AATGATAATCTTTATCAAT
Bacillus licheniformis DSM 13 BLi01184 -35 6.2 AATGATAATCTTTATCAAT
Bacillus halodurans C-125 BH2623 -100 5.9 GATGATTATCATTATCAAT
-59 6.5 AATGATAATCATTATCACT