Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LacR regulog to Streptococcus pneumoniae CDC1087-00

Reference regulog properties
Source regulog: LacR - Streptococcaceae
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Lactose utilization; Galactose utilization
Effector: D-galactose-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Streptococcus pneumoniae CDC1087-00
Orthologous TF(s) SpneCDC_010100005375
Regulated genes 4
Built upon 37 sites [see more]
Predicted regulatory interactions in Streptococcus pneumoniae CDC1087-00
Locus tag Position Score Sequence
Position: 3
Score: 6.4
Sequence: CTCAAACAA-(1)-AAAAATTAA
Position: 6
Score: 6
Sequence: AAACAAGAA-(1)-AATTAACCA
Position: 7
Score: 6.4
Sequence: AACAAGAAA-(1)-ATTAACCAA
Locus tag: SpneCDC_010100005375
SpneCDC_010100005375 3 6.4 CTCAAACAA-(1)-AAAAATTAA
6 6 AAACAAGAA-(1)-AATTAACCA
7 6.4 AACAAGAAA-(1)-ATTAACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacR
Ortholog function: Lactose utilization transcriptional regulator LacR, DeoR family
Lactococcus lactis subsp. cremoris SK11 LACR_D07 -105 -1.4 TTGTTTGAA-(1)-TTGTTTGTT
Streptococcus agalactiae 2603V/R SAG1936 -91 -2.3 TTGTTTATT-(1)-TTGTTTATT
Streptococcus gallolyticus UCN34 GALLO_0176 -201 -1.1 TTTTTTAAT-(1)-TTGTTTGTT
-191 -1.6 TTGTTTGTT-(1)-TTTTATGTT
Streptococcus mitis B6 smi_1041 -76 -2.3 TTGTTTTCT-(1)-TTGTTTTTT
Streptococcus pneumoniae TIGR4 SP_1182 -88 -0.6 ATTTTTGTT-(1)-TTGTTTTAT
-78 -1.4 TTGTTTTAT-(1)-TTGTTGTTT
Streptococcus pyogenes M1 GAS SPy1924 -113 -1.4 TTGTTAATT-(1)-TTGTTTTTT
Position: -153
Score: 7.1
Sequence: AGTAAAAAA-(1)-AAATAACAA
Position: -149
Score: 6.4
Sequence: AAAAATAAA-(1)-AACAAAAAC
Position: -146
Score: 6.9
Sequence: AATAAATAA-(1)-AAAAACAAA
Position: -143
Score: 8.1
Sequence: AAATAACAA-(1)-AACAAACAC
Locus tag: SpneCDC_010100005415
SpneCDC_010100005415 -153 7.1 AGTAAAAAA-(1)-AAATAACAA
-149 6.4 AAAAATAAA-(1)-AACAAAAAC
-146 6.9 AATAAATAA-(1)-AAAAACAAA
-143 8.1 AAATAACAA-(1)-AACAAACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacA
Ortholog function: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
Lactococcus lactis subsp. cremoris SK11 LACR_D06 -214 8.6 AACAAATAA-(1)-AAAAAACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1526 -117 6.5 GAAAAAAAC-(1)-AACAAATAA
Streptococcus mitis B6 smi_1026 -281 8.1 AAAACACAA-(1)-AACAAACAT
Streptococcus pneumoniae TIGR4 SP_1193 -143 8.8 AAATAACAA-(1)-AACAAACAA
Streptococcus suis 05ZYH33 SSU05_1043 -7 7.2 ATTAAACAT-(1)-AATAAACGA
Position: -126
Score: 6.5
Sequence: TATAACAAA-(1)-TATAAACAA
Position: -116
Score: 6.5
Sequence: TATAAACAA-(1)-ACAAAAATA
Position: -111
Score: 7.3
Sequence: ACAAAACAA-(1)-AATATAAAA
Position: -109
Score: 6.6
Sequence: AAAACAAAA-(1)-TATAAAAAA
Position: -108
Score: 6.4
Sequence: AAACAAAAA-(1)-ATAAAAAAA
Position: -101
Score: 6.4
Sequence: AATATAAAA-(1)-AAGAGACAA
Locus tag: SpneCDC_010100005435
SpneCDC_010100005435 -126 6.5 TATAACAAA-(1)-TATAAACAA
-116 6.5 TATAAACAA-(1)-ACAAAAATA
-111 7.3 ACAAAACAA-(1)-AATATAAAA
-109 6.6 AAAACAAAA-(1)-TATAAAAAA
-108 6.4 AAACAAAAA-(1)-ATAAAAAAA
-101 6.4 AATATAAAA-(1)-AAGAGACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gatA
Ortholog function: Galactose-specific PTS, EIIA component (EC 2.7.1.69)
Streptococcus agalactiae 2603V/R SAG1935 -137 9.1 AATAAACAA-(1)-AATAAACAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1766 -155 8.6 ATAAAACAA-(1)-AATAAACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1522 -117 6.5 GAAAAAAAC-(1)-AACAAATAA
Streptococcus pyogenes M1 GAS SPy1711 -166 7.2 AACAAAATA-(1)-ACAAAACAA
-156 8.2 ACAAAACAA-(1)-AACAAACAT
Streptococcus uberis 0140J SUB1460 -155 8.8 AAATAACAA-(1)-AACAAACAA
-145 8.8 AACAAACAA-(1)-AAATAACAA
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