Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CtsR regulog to Lactococcus lactis subsp. cremoris SK11

Reference regulog properties
Source regulog: CtsR - Streptococcaceae
Regulator type: Transcription factor
Regulator family: CtsR
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. cremoris SK11
Orthologous TF(s) LACR_0665
Regulated genes 3
Built upon 68 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. cremoris SK11
Locus tag Position Score Sequence
Position: -95
Score: 5.9
Sequence: TTTCTCTTGACTAAATCTGACCAT
Locus tag: LACR_0439
LACR_0439 -95 5.9 TTTCTCTTGACTAAATCTGACCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: groS
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Lactococcus lactis subsp. cremoris SK11 LACR_0439 -95 5.9 TTTCTCTTGACTAAATCTGACCAT
Lactococcus lactis subsp. lactis Il1403 L198515 -96 5.9 TTTCTCTTGACTAAATCTGACCAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_2041 -106 6.9 TTTTTCTTGACTATTTTTGACCAA
Streptococcus gallolyticus UCN34 GALLO_0124 -134 6.8 TTTTTCTTGACTATTTCTGACCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1886 -96 6.9 TTTTTCTTGACTATTTTTGACCAA
Streptococcus mitis B6 smi_0481 -102 6.8 TTTTTCTTGACTATTTCTGACCAA
Streptococcus mutans UA159 SMU.1955 -91 6.9 TTTTTCTTGACTATTTTTGACCAA
Streptococcus pneumoniae TIGR4 SP_1907 -102 6.2 TTTTTCTTGATTATTTCTGACCAA
Streptococcus pyogenes M1 GAS SPy2072 -107 6.9 TTTTTCTTGACTATTTTTGACCAA
Streptococcus sanguinis SK36 SSA_0225 -97 6.8 TTTTTCTTGACTATTTCTGACCAA
Streptococcus suis 05ZYH33 SSU05_0147 -66 6.5 ATGTTCTTGACTATTTTTGACCAA
Streptococcus uberis 0140J SUB1742 -108 6.6 TTTTTCTTGACTAATTTTGACCAA
Position: -110
Score: 6.8
Sequence: TTTTCTTTGACCTTTTTTGACCAA
Locus tag: LACR_0700
LACR_0700 -110 6.8 TTTTCTTTGACCTTTTTTGACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpP
Ortholog function: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
Lactococcus lactis subsp. cremoris SK11 LACR_0700 -110 6.8 TTTTCTTTGACCTTTTTTGACCAA
Lactococcus lactis subsp. lactis Il1403 L72391 -110 6.8 TATTCTTTGACCTTTTTTGACCAA
Streptococcus agalactiae 2603V/R SAG1585 -67 6.6 TATTATTTGACCTTTGTTGACCAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0439 -125 6.5 TATCATTTGACCTTTCTTGACCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1614 -93 6.8 TATCATTTGACCTTTTTTGACCAA
Streptococcus gallolyticus UCN34 GALLO_1763 -127 7 TTTTATTTGACCTTTTTTGACCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1632 -103 6.6 AAAAATTTGACCTTTATTGACCAA
Streptococcus mitis B6 smi_1417 -89 6.8 AAAAATTTGACCTTTTTTGACCAA
Streptococcus mutans UA159 SMU.1672 -68 6.8 AAATATTTGACCTTTTTTGACCAA
Streptococcus pneumoniae TIGR4 SP_0746 -89 6.8 AAAAATTTGACCTTTTTTGACCAA
Streptococcus pyogenes M1 GAS SPy0395 -125 6.6 TATGATTTGACCTTTATTGACCAA
Streptococcus sanguinis SK36 SSA_1731 -103 6.6 TTCTATTTGACCTTTTTTGACCAA
Streptococcus suis 05ZYH33 SSU05_1550 -67 6.1 TTTTTATTGACCAATTTTGACTAT
Streptococcus thermophilus CNRZ1066 str0356 -67 6.2 TTTTATTTGACCTAATTTGACTAA
Streptococcus uberis 0140J SUB0429 -98 6.7 TATTATTTGACCTTATTTGACCAA
Position: -98
Score: 6.3
Sequence: AAAAGCTTGACCATTACTGACTAA
Locus tag: LACR_1612
LACR_1612 -98 6.3 AAAAGCTTGACCATTACTGACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpB
Ortholog function: ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Lactococcus lactis subsp. cremoris SK11 LACR_1612 -98 6.3 AAAAGCTTGACCATTACTGACTAA
Lactococcus lactis subsp. lactis Il1403 L166407 -98 6.5 AAAAGTTTGACCATTACTGACCAA
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