Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Lactococcus lactis subsp. cremoris SK11

Reference regulog properties
Source regulog: Rex - Streptococcaceae
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. cremoris SK11
Orthologous TF(s) LACR_1156
Regulated genes 10
Built upon 161 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. cremoris SK11
Locus tag Position Score Sequence
Position: -91
Score: 4.5
Sequence: TTGTGATATAATTAACCT
Locus tag: LACR_0248
LACR_0248 -91 4.5 TTGTGATATAATTAACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgk
Ortholog function: Phosphoglycerate kinase (EC 2.7.2.3)
Lactococcus lactis subsp. cremoris SK11 LACR_0248 -91 4.5 TTGTGATATAATTAACCT
Lactococcus lactis subsp. lactis Il1403 L0010 -91 4.5 TTGTGATATAATTAACCT
Streptococcus agalactiae 2603V/R SAG1766 -84 4.7 TTGTGAAAAAGTAATCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0272 -96 4.3 TTGTGAAATAGTTAATTT
Streptococcus gallolyticus UCN34 GALLO_1995 -137 4.4 TTGTAAAATGATACAGAA
-47 4.5 TTGTGATATAATTAGCAT
Streptococcus gordonii str. Challis substr. CH1 SGO_0209 -46 4.7 TTGTGATATAATTATCAT
Streptococcus mutans UA159 SMU.361 -47 4.7 TTGTGATATAATTATCAT
Streptococcus sanguinis SK36 SSA_0302 -87 4.5 TTGTGAAAATTTTCTTTA
Streptococcus suis 05ZYH33 SSU05_0157 -87 4.4 TTGTGAAAAAAATATCTT
Streptococcus uberis 0140J SUB1629 -96 4.5 TTGTGAAAAAAATAATTT
Position: -80
Score: 4.4
Sequence: TTGAAAAATCTTTCAAAA
Locus tag: LACR_0668
LACR_0668 -80 4.4 TTGAAAAATCTTTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: eno
Ortholog function: Enolase (EC 4.2.1.11)
Lactococcus lactis subsp. cremoris SK11 LACR_0668 -80 4.4 TTGAAAAATCTTTCAAAA
Lactococcus lactis subsp. lactis Il1403 L0007 -80 4.4 TTGAAAAATCTTTCAAAA
Streptococcus agalactiae 2603V/R SAG0628 -123 4.4 TAGTGATTTTTTTATCAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0704 -52 4.8 TTGTGGTATTATTAACAT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0774 -52 4.8 TTGTGGTATTATTAACAT
Streptococcus gallolyticus UCN34 GALLO_1458 -38 4.4 GTGTAAAAATATTAAAAA
Streptococcus mutans UA159 SMU.1247 -49 4.6 TTGTGGTATGATTAACAT
Streptococcus pyogenes M1 GAS SPy0731 -52 4.3 TTGTGGTATTATGAACAT
Streptococcus sanguinis SK36 SSA_0886 -111 4.7 TTGTGCAAAATTTCTCAA
-35 4.2 TAGTAAATAATTTTAAAT
Streptococcus uberis 0140J SUB0655 -101 4.3 AAGTGAAATTTTTCATTA
-52 4.2 TTGTGATATTATGGACAT
Position: -74
Score: 5.3
Sequence: TTGATAAAATTATCACAA
Locus tag: LACR_1156
LACR_1156 -74 5.3 TTGATAAAATTATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rex
Ortholog function: Redox-sensitive transcriptional regulator Rex, Rex family
Lactococcus lactis subsp. cremoris SK11 LACR_1156 -74 5.3 TTGATAAAATTATCACAA
Lactococcus lactis subsp. lactis Il1403 L71932 -75 5.3 TTGATAAAATTATCACAA
Streptococcus agalactiae 2603V/R SAG1100 -36 4.5 TAATAAAATTTTTAACAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1050 -31 4.4 TAGTTGCATATTTCACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1228 -54 4.7 TAGTTGATTTTTTCACAA
Streptococcus mitis B6 smi_1188 -57 5 TTGTTGATTTTTTCACAA
Streptococcus mutans UA159 SMU.1053 -117 4.4 TTGTTATAAAAAAAACTA
-58 4.5 ATGTTGCATTTTTCACAA
Streptococcus pneumoniae TIGR4 SP_1090 -57 5 TTGTTGATTTTTTCACAA
Streptococcus pyogenes M1 GAS SPy1120 -76 4.5 ATGTTGCATTTTTCACAA
Streptococcus sanguinis SK36 SSA_1216 -55 4.7 TAGTTGATTTTTTCACAA
Streptococcus suis 05ZYH33 SSU05_1069 -100 4.5 CTGTTGATTTTTTCACAA
Streptococcus thermophilus CNRZ1066 str1463 -39 4.6 TTGTTGCAATCTTCACAA
Streptococcus uberis 0140J SUB0845 -52 4.4 TTGTTACAATAGTAACAT
Position: -218
Score: 4
Sequence: TTGTAGTATAAAAAACAT
Locus tag: LACR_1202
LACR_1202 -218 4 TTGTAGTATAAAAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pncB
Ortholog function: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Lactococcus lactis subsp. cremoris SK11 LACR_1202 -218 4 TTGTAGTATAAAAAACAT
Lactococcus lactis subsp. lactis Il1403 L107468 -181 3.9 TTGTAGTACAAAAAACAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1714 -39 4.7 ATGTTATAATAGTAACAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1574 -39 4.3 ATGGTATAATAATAACAA
Streptococcus mitis B6 smi_1492 -114 4.3 TTGTTACTCTTTTCTCAA
Streptococcus mutans UA159 SMU.464 -265 4.3 GTGTTATAATAGTAACAA
Streptococcus pneumoniae TIGR4 SP_1421 -114 4.3 TTGTTACTCTTTTCTCAA
Streptococcus pyogenes M1 GAS SPy1653 -39 4.7 ATGTTATAATAGTAACAA
Position: -63
Score: 4.1
Sequence: TTGTTGAAAAGATTATAT
Locus tag: LACR_1455
LACR_1455 -63 4.1 TTGTTGAAAAGATTATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Lactococcus lactis subsp. cremoris SK11 LACR_1455 -63 4.1 TTGTTGAAAAGATTATAT
Lactococcus lactis subsp. lactis Il1403 L0017 -63 4.1 TTGTTGAAAAGATTATAT
Streptococcus agalactiae 2603V/R SAG0959 -102 4.4 TTGCAAATTTTTTCACAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0911 -77 4.2 ATGACAAACAATTCTCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1022 -79 3.9 ATGACAAAGACATTACAA
Streptococcus gallolyticus UCN34 GALLO_1129 -106 4 TTTTCAAAGTTTTTACAA
Streptococcus gallolyticus UCN34 GALLO_2034 -85 3.8 TTATTATACAATTCCAAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1232 -118 3.8 TTCTAAAAACGTTTACAT
Streptococcus mitis B6 smi_1006 -62 4.2 AAGTGATAAAATTAAAAT
Streptococcus mutans UA159 SMU.1115 -81 4.4 TAGTGACTTTCTTAACAA
Streptococcus pyogenes M1 GAS SPy1151 -77 4.1 ATGACAAACAATTATCAA
Streptococcus sanguinis SK36 SSA_1221 -116 4.5 TTGTAAAAACGTTTACAT
Streptococcus uberis 0140J SUB0879 -77 4.3 GTGACAAACTATTCACAA
Position: -63
Score: 4.9
Sequence: TAGAAAAAAACTTCACAA
Locus tag: LACR_2168
LACR_2168 -63 4.9 TAGAAAAAAACTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fba
Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Lactococcus lactis subsp. lactis Il1403 L0009 -63 4.8 TAGAAAAATACTTCACAA
Streptococcus mitis B6 smi_0695 -62 4.5 AAGTGATAAAATGAACAA
Streptococcus suis 05ZYH33 SSU05_0336 -111 4.7 ATGTGAAAGTTTTCTCAA
Streptococcus thermophilus CNRZ1066 str1899 -60 4.9 TTGTGATAAAATAAACAT
Streptococcus uberis 0140J SUB0330 -59 4.4 TTGTGCTAAAATGAACAA
Position: -101
Score: 5
Sequence: TTGTAAATTTCATCACAA
Position: -58
Score: 4.7
Sequence: TTGTTAAACTATTCACGT
Locus tag: LACR_2457
LACR_2457 -101 5 TTGTAAATTTCATCACAA
-58 4.7 TTGTTAAACTATTCACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
Lactococcus lactis subsp. cremoris SK11 LACR_2457 -101 5 TTGTAAATTTCATCACAA
-58 4.7 TTGTTAAACTATTCACGT
-34 4.5 AAGTGAATGAAATCACAA
Lactococcus lactis subsp. lactis Il1403 L13145 -101 5 TTGTAAAAACTATCACAA
-58 4.7 TTGTTAAACTATTCACGT
-34 4.3 AAGTGAATGAAGTCACAA
Streptococcus gallolyticus UCN34 GALLO_0220 -260 4.2 TTGTAATAAAAATGAAAA
-216 4.3 TTGAAAAAAGTTTAATAT
-195 4.7 TGGTGAAGAATATCACAA
Streptococcus mutans UA159 SMU.148 -130 5.3 TTGGGAAAAAATTCACAA
-96 4.8 TTGTGAAAAGGGTTACAA
-74 4.8 AAGTGAAGAAAATCACAA
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