Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GntR1 regulog to Lactococcus lactis subsp. lactis Il1403

Reference regulog properties
Source regulog: GntR1 - Streptococcaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode:
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. lactis Il1403
Orthologous TF(s) L54944
Regulated genes 3
Built upon 6 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. lactis Il1403
Locus tag Position Score Sequence
Position: -97
Score: 5.9
Sequence: CATGTAAAATATTTACATA
Locus tag: L0046
L0046 -97 5.9 CATGTAAAATATTTACATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntZ2
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Lactococcus lactis subsp. cremoris SK11 LACR_0642 -98 5.7 TATGTAAAACATTTACACA
Lactococcus lactis subsp. lactis Il1403 L0046 -97 5.9 CATGTAAAATATTTACATA
Position: -92
Score: 5.6
Sequence: TCAGAAAATATTTTACAAA
Locus tag: L53699
L53699 -92 5.6 TCAGAAAATATTTTACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntZ1
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Lactococcus lactis subsp. cremoris SK11 LACR_2497 -96 5.6 TCAGAAAATATTTTACAAA
Lactococcus lactis subsp. lactis Il1403 L53699 -92 5.6 TCAGAAAATATTTTACAAA
Position: -287
Score: 5.6
Sequence: TTTGTAAAATATTTTCTGA
Locus tag: L54944
L54944 -287 5.6 TTTGTAAAATATTTTCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntR1
Ortholog function: Gluconate utilization transcriptional regulator GntR, RpiR family
Lactococcus lactis subsp. cremoris SK11 LACR_2498 -291 5.6 TTTGTAAAATATTTTCTGA
Lactococcus lactis subsp. lactis Il1403 L54944 -287 5.6 TTTGTAAAATATTTTCTGA
© 2009-2020 RegPrecise