Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HomR regulog to Lactococcus lactis subsp. lactis Il1403

Reference regulog properties
Source regulog: HomR - Streptococcaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: Methionine metabolism; Cysteine metabolism
Effector: O-acetyl-L-serine
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. lactis Il1403
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 24 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. lactis Il1403
Locus tag Position Score Sequence
Position: -79
Score: 6
Sequence: GCTATAAAAAAATCTTATAGC
Locus tag: L0181
L0181 -79 6 GCTATAAAAAAATCTTATAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: metB2
Ortholog function: Cystathionine gamma-lyase (EC 4.4.1.1)
Lactococcus lactis subsp. cremoris SK11 LACR_0831 -80 4.8 GACATAGCATTTTCTTATGGC
Lactococcus lactis subsp. lactis Il1403 L0181 -79 6 GCTATAAAAAAATCTTATAGC
Position: -99
Score: 4.3
Sequence: CATATAGTTTAAAACTATAGG
Locus tag: L0100
L0100 -99 4.3 CATATAGTTTAAAACTATAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: metE
Ortholog function: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Lactococcus lactis subsp. lactis Il1403 L0100 -99 4.3 CATATAGTTTAAAACTATAGG
Streptococcus gallolyticus UCN34 GALLO_1316 -172 5.2 GTTATAGTTAAAAACTATAAT
Streptococcus gordonii str. Challis substr. CH1 SGO_0310 -182 5.2 GTTATAGTTTTTGATTATACC
-99 4.6 GATATAGTTTTTGGCTATATC
Streptococcus mitis B6 smi_1600 -101 4.8 GATATAGTTTCAAACTATATC
Streptococcus mutans UA159 SMU.873 -188 5.4 GTTATAGATGAAAACTATAAC
Streptococcus pneumoniae TIGR4 SP_0585 -251 5 GTTATAGTCTTTTCTAATAAC
-218 5 CTTATAAGAATTACTAATAAC
Streptococcus sanguinis SK36 SSA_0416 -182 5.3 GTCATAATTTCTACCTATAGC
-99 5.2 GTTATAGTTTTAGACTATATC
Streptococcus suis 05ZYH33 SSU05_1774 -237 4.7 TTCATAGATAAAATCTATACC
-101 4.8 GTTATAGTCAAAAGTTATACC
Streptococcus thermophilus CNRZ1066 str0785 -60 4.6 GATATAGTTTAAAACTATATA