Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YrkD regulog to Geobacillus kaustophilus HTA426

Reference regulog properties
Source regulog: YrkD - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus kaustophilus HTA426
Orthologous TF(s) GK2071
Regulated genes 7
Built upon 39 sites [see more]
Predicted regulatory interactions in Geobacillus kaustophilus HTA426
Locus tag Position Score Sequence
Position: -22
Score: 4.6
Sequence: ATACATTAGGGGGTAT
Locus tag: GK2065
GK2065 -22 4.6 ATACATTAGGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkH
Ortholog function: Zn-dependent hydroxyacylglutathione hydrolase / Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2342 -36 4.9 ATACCCTATAAGGTAT
Geobacillus kaustophilus HTA426 GK2065 -22 4.6 ATACATTAGGGGGTAT
Position: -69
Score: 5.5
Sequence: ATACCCATATATGTAT
Locus tag: GK2069
GK2069 -69 5.5 ATACCCATATATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkE
Ortholog function: Putative sulfur reduction protein
Bacillus amyloliquefaciens FZB42 RBAM_005430 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0798 -32 5.4 ATACCCCTATAGGTAA
Bacillus licheniformis DSM 13 BLi02794 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Bacillus pumilus SAFR-032 BPUM_0190 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Bacillus subtilis subsp. subtilis str. 168 BSU26540 -101 4.6 ATACCCCCTATGGTAT
-34 5.2 ATACCCGCAGGGGTAA
Geobacillus kaustophilus HTA426 GK2069 -69 5.5 ATACCCATATATGTAT
Oceanobacillus iheyensis HTE831 OB2652 -116 5.9 ATACCTGTACGGGTAT
-45 5.4 ATACCTATGCGGGTAT
Position: -52
Score: 5.6
Sequence: ATACCCATAGGGGTAA
Locus tag: GK2070
GK2070 -52 5.6 ATACCCATAGGGGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkI
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2345 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Geobacillus kaustophilus HTA426 GK2070 -52 5.6 ATACCCATAGGGGTAA
Position: -56
Score: 5.1
Sequence: ATACTATTAGGGGTAT
Locus tag: GK2072
GK2072 -56 5.1 ATACTATTAGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK2072
Ortholog function: Rhodanese-like domain protein
Geobacillus kaustophilus HTA426 GK2072 -56 5.1 ATACTATTAGGGGTAT
Position: -97
Score: 5.2
Sequence: ATACACGTATATGTAT
Locus tag: GK2076
GK2076 -97 5.2 ATACACGTATATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK2076
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Geobacillus kaustophilus HTA426 GK2076 -103 4.9 ATACATATACACGTAT
-97 5.2 ATACACGTATATGTAT
Position: -91
Score: 4.5
Sequence: AATCCCCTATGGGTAT
Locus tag: GK2090
GK2090 -91 4.5 AATCCCCTATGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmt2
Ortholog function: Sulfide-quinone reductase
Anoxybacillus flavithermus WK1 Aflv_0282 -93 4.5 AATCCCCTATGGGTAT
Bacillus licheniformis DSM 13 BLi02786 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Geobacillus kaustophilus HTA426 GK2090 -91 4.5 AATCCCCTATGGGTAT
Position: -98
Score: 5.5
Sequence: ATACATATAGGGGTAT
Locus tag: GK2091
GK2091 -98 5.5 ATACATATAGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_0303
Ortholog function: CoA-disulfide reductase (EC 1.8.1.14) / Rhodanese domain protein
Anoxybacillus flavithermus WK1 Aflv_1299 -32 4.6 TTACACGTACTTGTAT
Bacillus cereus ATCC 14579 BC0791 -68 5.8 ATACCCATACAGGTAT
Geobacillus kaustophilus HTA426 GK2091 -98 5.5 ATACATATAGGGGTAT
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